FFCP PHASE1:Hg19::chrX:135614405..135614416,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51442 | |EntrezGene=51442 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20985 | |HGNC=20985 | ||
|TSSclassifier=strong | |||
|UniProt=Q99990,E9PHC2 | |UniProt=Q99990,E9PHC2 | ||
|association_with_transcript=94bp_to_ENST00000370634,ENST00000430688,NM_016267,uc004ezy.2_5end | |association_with_transcript=94bp_to_ENST00000370634,ENST00000430688,NM_016267,uc004ezy.2_5end | ||
|cluster_id=chrX:135614405..135614416,+ | |||
|coexpression_cluster_id=C83 | |coexpression_cluster_id=C83 | ||
|description=CAGE_peak_3_at_VGLL1_5end | |description=CAGE_peak_3_at_VGLL1_5end | ||
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|ontology_enrichment_celltype=CL:0000066!6.46e-19!254;CL:0002076!4.25e-17!43;CL:0000223!7.08e-14!59;CL:0002159!8.33e-10!13;CL:0000244!9.37e-10!4;CL:0000731!9.37e-10!4;CL:0002541!1.17e-08!3;CL:0000349!1.81e-08!3;CL:0002577!1.81e-08!3;CL:0000239!1.44e-07!3;CL:1000615!1.44e-07!3;CL:0002306!1.44e-07!3;CL:0002231!4.11e-07!3;CL:0002368!5.81e-07!13;CL:0002077!7.04e-07!33 | |ontology_enrichment_celltype=CL:0000066!6.46e-19!254;CL:0002076!4.25e-17!43;CL:0000223!7.08e-14!59;CL:0002159!8.33e-10!13;CL:0000244!9.37e-10!4;CL:0000731!9.37e-10!4;CL:0002541!1.17e-08!3;CL:0000349!1.81e-08!3;CL:0002577!1.81e-08!3;CL:0000239!1.44e-07!3;CL:1000615!1.44e-07!3;CL:0002306!1.44e-07!3;CL:0002231!4.11e-07!3;CL:0002368!5.81e-07!13;CL:0002077!7.04e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0000349;9.45e-22;19!CL:0002541;1.85e-14;3!CL:0002577;3.77e-14;3!CL:0002536;5.92e-10;2!CL:0000244;9.76e-10;4!CL:0000731;9.76e-10;4!CL:0000575;1.62e-09;2!CL:1000415;2.60e-09;2!CL:0002681;1.67e-08;12!CL:0002584;1.67e-08;12!CL:0002251;5.15e-07;20!CL:1000507;9.50e-07;10!CL:1000494;9.50e-07;10!CL:1000449;9.50e-07;15 | |ontology_enrichment_celltype_v019=CL:0000349;9.45e-22;19!CL:0002541;1.85e-14;3!CL:0002577;3.77e-14;3!CL:0002536;5.92e-10;2!CL:0000244;9.76e-10;4!CL:0000731;9.76e-10;4!CL:0000575;1.62e-09;2!CL:1000415;2.60e-09;2!CL:0002681;1.67e-08;12!CL:0002584;1.67e-08;12!CL:0002251;5.15e-07;20!CL:1000507;9.50e-07;10!CL:1000494;9.50e-07;10!CL:1000449;9.50e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.00e-21,19;CL:0002541,1.77e-14,3;CL:0002577,3.94e-14,3;CL:0000066,7.32e-12,253;CL:0002536,5.93e-10,2;CL:0000244,7.49e-10,4;CL:0000731,7.49e-10,4;CL:0000575,1.55e-09,2;CL:1000415,3.36e-09,2;CL:0002681,1.39e-08,12;CL:0002584,1.39e-08,12;CL:0002251,4.83e-07,20;CL:1000507,7.98e-07,10;CL:1000494,7.98e-07,10;CL:1000449,8.24e-07,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.45e-20!14;UBERON:0000158!2.45e-20!14;UBERON:0003124!8.24e-18!7;UBERON:0004119!2.87e-12!169;UBERON:0000925!2.87e-12!169;UBERON:0006595!2.87e-12!169;UBERON:0006554!4.01e-12!44;UBERON:0001008!9.45e-12!45;UBERON:0000365!1.29e-11!5;UBERON:0001987!7.51e-11!4;UBERON:0004340!7.51e-11!4;UBERON:0000478!1.12e-10!24;UBERON:0005910!1.32e-09!6;UBERON:0000476!1.17e-08!3;UBERON:0000920!1.17e-08!3;UBERON:0005911!1.81e-08!82;UBERON:0004923!3.59e-08!57;UBERON:0006853!1.44e-07!3;UBERON:0007685!1.44e-07!3;UBERON:0004134!1.44e-07!3;UBERON:0000077!5.02e-07!130;UBERON:0000464!7.16e-07!104 | |ontology_enrichment_uberon=UBERON:0005631!2.45e-20!14;UBERON:0000158!2.45e-20!14;UBERON:0003124!8.24e-18!7;UBERON:0004119!2.87e-12!169;UBERON:0000925!2.87e-12!169;UBERON:0006595!2.87e-12!169;UBERON:0006554!4.01e-12!44;UBERON:0001008!9.45e-12!45;UBERON:0000365!1.29e-11!5;UBERON:0001987!7.51e-11!4;UBERON:0004340!7.51e-11!4;UBERON:0000478!1.12e-10!24;UBERON:0005910!1.32e-09!6;UBERON:0000476!1.17e-08!3;UBERON:0000920!1.17e-08!3;UBERON:0005911!1.81e-08!82;UBERON:0004923!3.59e-08!57;UBERON:0006853!1.44e-07!3;UBERON:0007685!1.44e-07!3;UBERON:0004134!1.44e-07!3;UBERON:0000077!5.02e-07!130;UBERON:0000464!7.16e-07!104 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.33e-21;10!UBERON:0000158;3.33e-21;10!UBERON:0000478;1.68e-20;24!UBERON:0001987;1.70e-18;4!UBERON:0003124;1.85e-14;3!UBERON:0000920;1.85e-14;3!UBERON:0000305;2.46e-10;7!UBERON:0006554;1.41e-09;30!UBERON:0001008;1.41e-09;30!UBERON:0001225;1.67e-08;12!UBERON:0008987;1.67e-08;12!UBERON:0000365;6.99e-08;5!UBERON:0004211;9.50e-07;10!UBERON:0009773;9.50e-07;10!UBERON:0001231;9.50e-07;10!UBERON:0004810;9.50e-07;10!UBERON:0001851;9.50e-07;15!UBERON:0006555;9.50e-07;15!UBERON:0000353;9.50e-07;15!UBERON:0004819;9.50e-07;15!UBERON:0001285;9.50e-07;15!UBERON:0007684;9.50e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0005631;3.33e-21;10!UBERON:0000158;3.33e-21;10!UBERON:0000478;1.68e-20;24!UBERON:0001987;1.70e-18;4!UBERON:0003124;1.85e-14;3!UBERON:0000920;1.85e-14;3!UBERON:0000305;2.46e-10;7!UBERON:0006554;1.41e-09;30!UBERON:0001008;1.41e-09;30!UBERON:0001225;1.67e-08;12!UBERON:0008987;1.67e-08;12!UBERON:0000365;6.99e-08;5!UBERON:0004211;9.50e-07;10!UBERON:0009773;9.50e-07;10!UBERON:0001231;9.50e-07;10!UBERON:0004810;9.50e-07;10!UBERON:0001851;9.50e-07;15!UBERON:0006555;9.50e-07;15!UBERON:0000353;9.50e-07;15!UBERON:0004819;9.50e-07;15!UBERON:0001285;9.50e-07;15!UBERON:0007684;9.50e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.94e-37,14;UBERON:0000158,8.94e-37,14;UBERON:0003124,3.57e-31,7;UBERON:0000478,1.78e-20,24;UBERON:0001987,1.82e-18,4;UBERON:0004340,1.82e-18,4;UBERON:0006554,1.59e-14,47;UBERON:0000920,1.77e-14,3;UBERON:0001008,3.69e-14,48;UBERON:0004923,2.94e-13,66;UBERON:0000305,2.62e-10,7;UBERON:0004871,5.02e-09,8;UBERON:0001225,1.39e-08,12;UBERON:0008987,1.39e-08,12;UBERON:0000365,5.68e-08,5;UBERON:0000995,3.54e-07,21;UBERON:0004810,7.98e-07,10;UBERON:0005795,8.05e-07,22;UBERON:0003975,8.05e-07,22;UBERON:0001851,8.24e-07,15;UBERON:0004211,8.24e-07,15;UBERON:0009773,8.24e-07,15;UBERON:0000353,8.24e-07,15;UBERON:0001231,8.24e-07,15;UBERON:0001285,8.24e-07,15;UBERON:0007684,8.24e-07,15;UBERON:0004208,8.24e-07,15 | |||
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| ||
|short_description=p3@VGLL1 | |short_description=p3@VGLL1 | ||
}} | }} |
Latest revision as of 14:48, 19 September 2015
Short description: | p3@VGLL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VGLL1_5end |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | 94bp_to_ENST00000370634, ENST00000430688, NM_016267, uc004ezy.2_5end |
EntrezGene: | VGLL1 |
HGNC: | 20985 |
UniProt: | Q99990E9PHC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.00e-21 | 19 |
chorionic membrane mesenchymal stem cell | 1.77e-14 | 3 |
placental epithelial cell | 3.94e-14 | 3 |
epithelial cell | 7.32e-12 | 253 |
amniotic epithelial cell | 5.93e-10 | 2 |
transitional epithelial cell | 7.49e-10 | 4 |
urothelial cell | 7.49e-10 | 4 |
corneal epithelial cell | 1.55e-09 | 2 |
epithelial cell of gall bladder | 3.36e-09 | 2 |
kidney cortical cell | 1.39e-08 | 12 |
renal cortical epithelial cell | 1.39e-08 | 12 |
epithelial cell of alimentary canal | 4.83e-07 | 20 |
kidney tubule cell | 7.98e-07 | 10 |
nephron tubule epithelial cell | 7.98e-07 | 10 |
epithelial cell of nephron | 8.24e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.94e-37 | 14 |
membranous layer | 8.94e-37 | 14 |
chorion | 3.57e-31 | 7 |
extraembryonic structure | 1.78e-20 | 24 |
placenta | 1.82e-18 | 4 |
allantois | 1.82e-18 | 4 |
urinary system structure | 1.59e-14 | 47 |
egg chorion | 1.77e-14 | 3 |
renal system | 3.69e-14 | 48 |
organ component layer | 2.94e-13 | 66 |
amnion | 2.62e-10 | 7 |
somatic layer of lateral plate mesoderm | 5.02e-09 | 8 |
cortex of kidney | 1.39e-08 | 12 |
renal parenchyma | 1.39e-08 | 12 |
urothelium | 5.68e-08 | 5 |
uterus | 3.54e-07 | 21 |
nephron tubule epithelium | 7.98e-07 | 10 |
embryonic uterus | 8.05e-07 | 22 |
internal female genitalia | 8.05e-07 | 22 |
cortex | 8.24e-07 | 15 |
nephron epithelium | 8.24e-07 | 15 |
renal tubule | 8.24e-07 | 15 |
parenchyma | 8.24e-07 | 15 |
nephron tubule | 8.24e-07 | 15 |
nephron | 8.24e-07 | 15 |
uriniferous tubule | 8.24e-07 | 15 |
nephrogenic mesenchyme | 8.24e-07 | 15 |