FFCP PHASE1:Hg19::chr10:81967456..81967471,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=439990 | |EntrezGene=439990 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000422847,NR_038464,uc001kbv.2_5end | |association_with_transcript=0bp_to_ENST00000422847,NR_038464,uc001kbv.2_5end | ||
|cluster_id=chr10:81967456..81967471,+ | |||
|description=CAGE_peak_3_at_LOC439990_5end | |description=CAGE_peak_3_at_LOC439990_5end | ||
|id=chr10:81967456..81967471,+ | |id=chr10:81967456..81967471,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.56e-12!254;CL:0000077!3.81e-07!19 | |ontology_enrichment_celltype=CL:0000066!5.56e-12!254;CL:0000077!3.81e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:1000415;1.81e-07;2!CL:0002535;1.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.45e-07,2;CL:1000415,1.64e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!7.67e-29!106;DOID:0050687!6.57e-23!143;DOID:14566!4.05e-16!239;DOID:162!1.40e-15!235;DOID:299!1.50e-08!25;DOID:0050615!2.26e-08!16;DOID:1749!4.09e-08!14;DOID:1324!2.26e-07!15 | |ontology_enrichment_disease=DOID:305!7.67e-29!106;DOID:0050687!6.57e-23!143;DOID:14566!4.05e-16!239;DOID:162!1.40e-15!235;DOID:299!1.50e-08!25;DOID:0050615!2.26e-08!16;DOID:1749!4.09e-08!14;DOID:1324!2.26e-07!15 | ||
|ontology_enrichment_disease_v019=DOID:1749;3.08e-22;14!DOID:1325;4.58e-08;7!DOID:3904;4.58e-08;7!DOID:3910;1.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.89e-22,14;DOID:305,6.73e-13,106;DOID:0050687,3.39e-09,143;DOID:1325,5.28e-08,7;DOID:3904,5.28e-08,7;DOID:3910,2.40e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005157!3.77e-08!51;UBERON:0001007!5.50e-08!155;UBERON:0001555!5.50e-08!155;UBERON:0007026!5.50e-08!155;UBERON:0000481!9.56e-08!347;UBERON:0000077!1.53e-07!130;UBERON:0004119!1.54e-07!169;UBERON:0000925!1.54e-07!169;UBERON:0006595!1.54e-07!169;UBERON:0005153!3.46e-07!37;UBERON:0004921!5.12e-07!129;UBERON:0004185!5.12e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;9.15e-14;4!UBERON:0004785;9.15e-14;4!UBERON:0001264;1.11e-11;10!UBERON:0002075;3.29e-11;18!UBERON:0000945;6.15e-11;5!UBERON:0010039;6.15e-11;5!UBERON:0000974;1.75e-09;6!UBERON:0004903;1.81e-07;2!UBERON:0006955;1.81e-07;2!UBERON:0004801;1.81e-07;2!UBERON:0002173;1.81e-07;2!UBERON:0002186;1.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,8.59e-14,4;UBERON:0004785,8.59e-14,4;UBERON:0001264,9.76e-12,10;UBERON:0002075,2.87e-11,18;UBERON:0006955,1.45e-07,2;UBERON:0004801,1.45e-07,2;UBERON:0004903,2.40e-07,2;UBERON:0002173,2.40e-07,2;UBERON:0002186,2.40e-07,2;UBERON:0000945,3.45e-07,8;UBERON:0010039,3.45e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0.43596006883328,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.799783929456456,0,0,0,0,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0.229628896329213,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.512900250232778,0.984043937099117,0,0,0,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0.551365343546124,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,3.03401304373784,0,1.13654458722565,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.269605053441981,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.455173793141999,0.254253650292766,0.945550727071745,0,0,0,0,0.120596438625408,0,0,0,0,0.32681539055697,0,0.153900517007594,0,0.23056390438806,0.269272933229316,0.217294743844016,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0,0,0,0.210998064528027,0.326465616318295,0.565412285735763,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0.063186579628488,0.150323419414493,0.414752765588989,1.32930774541437,1.65495977937749,1.2557316736289,0,0.284609546029793,0,0.173559738335131,0.293977192243133,1.56706571844725,0.34945333648406,0.51595809741485,0.967563312890852,0.803982487948041,0.574808199372465,0.290967049465258,0,0.225980740780532,0,0.397429223405979,0.126621591911757,1.36885967914362,0.881747022766871,0.213452994739353,0.19980960958213,1.44090417154106,2.06165873098648,0,0.14405479798815,0.372757606696298,0.707082103850386,0.135904206073614,0,0.101998217636322,0.288950589901519,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0.858452096273142,0.223171457441873,0.134366944973453,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0.422401346077626,0.35857467866569,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0.684347351537318,0,0.106787412567695,0,0,0,0,0,1.27668251554036,0.544017803369474,0,0,0,0.942324577501406,0.886068179966986,0,0.250381861413,0,0.332787154610557,0.0620964029413835,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0,0,0.385239660814607,0.643324774124777,0,0.453411851024545,0.231522474323834,0,0.358177682162975,0,0.219284049578707,0.353378291891762,0.771656153083659,0.337884881306145,0,0.345430341731199,0,0.138258436151731,0,0.132864840313363,0,0,0.737318726261158,0.633936370075881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0.207471757392654,0.161475645631851,0,3.53331786603692,4.83675865725735,0,0.231051332300676,0,0,0,0.225630985047772,0,0,0,0,0.591424344868181,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0,0,0,0.766574565837572,0,0.336283722218824,0,0.227662191351298,0.177404740325278,0,0,0.203909198930495,0.0657727735628491,4.13678443093889,0.556157009460346,0.078493092850514,0,0,0,0,0,0.428859265059938,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.223710863595585,0.098150233615243,0,0,0.102662806856247,0,0,0,0,0.713520544665411,0,0,2.41540549706678,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0.401206833445841,0,0,0,0,0.135982980381829,0,0,0,0,0,0.252332849670158,0,0,0,0,0,0.250707539292375,0.0757786982182394,0.535928260312357,0,0.103432995861895,0,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0.960546112899439,0,0.269475606319761,0,0,0,0,0,0 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| ||
|short_description=p3@LOC439990 | |short_description=p3@LOC439990 | ||
}} | }} |
Latest revision as of 15:06, 19 September 2015
Short description: | p3@LOC439990 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC439990_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000422847, NR_038464, uc001kbv.2_5end |
EntrezGene: | LOC439990 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.45e-07 | 2 |
epithelial cell of gall bladder | 1.64e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 8.59e-14 | 4 |
respiratory system mucosa | 8.59e-14 | 4 |
pancreas | 9.76e-12 | 10 |
viscus | 2.87e-11 | 18 |
uterine epithelium | 1.45e-07 | 2 |
cervix epithelium | 1.45e-07 | 2 |
bronchoalveolar duct junction | 2.40e-07 | 2 |
alveolar duct | 2.40e-07 | 2 |
bronchiole | 2.40e-07 | 2 |
stomach | 3.45e-07 | 8 |
food storage organ | 3.45e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.89e-22 | 14 |
carcinoma | 6.73e-13 | 106 |
cell type cancer | 3.39e-09 | 143 |
bronchus cancer | 5.28e-08 | 7 |
bronchogenic carcinoma | 5.28e-08 | 7 |
lung adenocarcinoma | 2.40e-07 | 2 |