FFCP PHASE1:Hg19::chr10:82049339..82049366,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=4143 | |EntrezGene=4143 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=6903 | |HGNC=6903 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-46bp_to_ENST00000372206_5end | |association_with_transcript=-46bp_to_ENST00000372206_5end | ||
|cluster_id=chr10:82049339..82049366,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_2_at_MAT1A_5end | |description=CAGE_peak_2_at_MAT1A_5end | ||
Latest revision as of 15:08, 19 September 2015
| Short description: | p2@MAT1A |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_MAT1A_5end |
| Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
| Association with transcript: | -46bp_to_ENST00000372206_5end |
| EntrezGene: | MAT1A |
| HGNC: | 6903 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p2@MAT1A |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hepatocyte | 7.80e-33 | 12 |
| endodermal cell | 2.24e-12 | 58 |
| intestinal epithelial cell | 7.89e-09 | 4 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| liver | 8.80e-34 | 19 |
| digestive gland | 8.80e-34 | 19 |
| liver bud | 8.80e-34 | 19 |
| hepatic diverticulum | 5.30e-29 | 22 |
| liver primordium | 5.30e-29 | 22 |
| digestive tract diverticulum | 1.10e-27 | 23 |
| epithelial sac | 2.29e-25 | 25 |
| epithelium of foregut-midgut junction | 2.29e-25 | 25 |
| anatomical boundary | 2.29e-25 | 25 |
| hepatobiliary system | 2.29e-25 | 25 |
Showing 1 to 10 of 38 entries
| Ontology term | p-value | n |
|---|---|---|
| disease of anatomical entity | 3.02e-09 | 39 |
| anemia | 3.25e-09 | 1 |
| vascular disease | 4.15e-09 | 1 |
| ischemia | 4.15e-09 | 1 |
| extrinsic cardiomyopathy | 4.15e-09 | 1 |
| myocardial ischemia | 4.15e-09 | 1 |
| myocardial infarction | 4.15e-09 | 1 |
| cardiovascular system disease | 9.25e-09 | 4 |
Showing 1 to 8 of 8 entries
