FFCP PHASE1:Hg19::chrX:136648735..136648747,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7547 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12874 | |||
|TSSclassifier=strong | |||
|UniProt=Q5JY75 | |||
|association_with_transcript=58bp_to_ENST00000370606_5end | |||
|cluster_id=chrX:136648735..136648747,+ | |||
|coexpression_cluster_id=C595 | |||
|description=CAGE_peak_9_at_ZIC3_5end | |||
|id=chrX:136648735..136648747,+ | |||
|ontology_enrichment_celltype=CL:0002322!4.43e-20!5;CL:0002603!3.33e-12!3;CL:0000064!3.59e-12!3;CL:0005012!3.59e-12!3;CL:0000067!3.59e-12!3;CL:0002304!3.59e-12!3;CL:0000133!4.59e-12!59;CL:0000708!1.13e-11!3;CL:0000221!1.82e-09!71;CL:0000039!8.79e-09!7;CL:0000586!8.79e-09!7;CL:0002575!2.61e-08!2;CL:0000075!7.61e-08!27;CL:0000047!1.54e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.50e-76;5!CL:0002321;2.40e-36;15!CL:0000148;1.98e-14;10!CL:0000075;4.08e-14;27!CL:0000710;1.60e-12;20!CL:0000147;1.75e-10;14!CL:0002077;3.23e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.50e-76,5;CL:0000148,2.03e-14,10;CL:0000541,2.03e-14,10;CL:0000075,4.02e-14,27;CL:0000710,1.53e-12,20;CL:0000147,1.78e-10,14;CL:0000333,7.38e-09,41;CL:0000133,9.77e-09,59;CL:0002077,1.74e-07,34;CL:0000221,3.76e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.39e-07;10!UBERON:0005564;4.39e-07;10 | |||
|ontology_enrichment_disease=DOID:3095!1.94e-12!22;DOID:2994!1.94e-12!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.78e-11;22!DOID:2994;1.78e-11;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.73e-11,22;DOID:2994,1.73e-11,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.92e-21!94;UBERON:0001016!1.92e-21!94;UBERON:0005743!2.10e-20!86;UBERON:0002616!2.24e-20!59;UBERON:0001017!7.28e-20!82;UBERON:0003075!5.14e-19!86;UBERON:0007284!5.14e-19!86;UBERON:0004733!5.65e-18!12;UBERON:0002028!5.65e-18!12;UBERON:0007277!5.65e-18!12;UBERON:0002346!6.55e-18!90;UBERON:0001049!6.34e-17!57;UBERON:0005068!6.34e-17!57;UBERON:0006241!6.34e-17!57;UBERON:0007135!6.34e-17!57;UBERON:0004732!1.73e-16!13;UBERON:0000955!1.99e-16!69;UBERON:0006238!1.99e-16!69;UBERON:0004121!1.08e-15!169;UBERON:0000924!3.74e-15!173;UBERON:0006601!3.74e-15!173;UBERON:0003076!4.10e-14!15;UBERON:0003057!4.10e-14!15;UBERON:0000033!7.22e-14!123;UBERON:0000153!6.13e-13!129;UBERON:0007811!6.13e-13!129;UBERON:0003056!3.26e-12!61;UBERON:0001778!3.59e-12!3;UBERON:0001775!3.59e-12!3;UBERON:0003210!1.13e-11!3;UBERON:0001896!4.13e-11!3;UBERON:0005290!4.13e-11!3;UBERON:0010096!4.13e-11!3;UBERON:0002037!3.86e-10!6;UBERON:0006215!3.86e-10!6;UBERON:0002680!5.22e-10!9;UBERON:0001895!5.22e-10!9;UBERON:0010092!5.22e-10!9;UBERON:0000488!3.13e-09!4;UBERON:0007625!2.11e-08!11;UBERON:0002200!2.40e-08!11;UBERON:0006876!2.40e-08!11;UBERON:0000369!3.48e-08!4;UBERON:0002435!3.48e-08!4;UBERON:0000204!3.48e-08!4;UBERON:0010082!3.48e-08!4;UBERON:0009663!5.76e-08!7;UBERON:0000473!1.10e-07!8;UBERON:0002780!1.37e-07!41;UBERON:0001890!1.37e-07!41;UBERON:0006240!1.37e-07!41;UBERON:0003080!2.29e-07!42;UBERON:0002298!3.87e-07!8 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23121058076788,0.816002764977012,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98523116044542,0.443458794925128,0.966182642624386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43947412259191,3.04818467139416,2.67246068599892,2.17688215532278,2.27088765788066,4.74470566798579,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62302566965108,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784917590417525,0.43596006883328,0.2933531432838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587403472388222,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0.550157746388935,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79052119825112,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0.135939465953663,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788857810965923,0.0679914901909147,0,0,0,0,0,11.1026453854869,9.8339014767326,0.633492505057185,0.917899467677836,0.26721740526556,0.551369397209069,1.75495277504663,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@ZIC3 | |||
}} |
Latest revision as of 15:51, 19 September 2015
Short description: | p9@ZIC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ZIC3_5end |
Coexpression cluster: | C595_teratocarcinoma_HES3GFP_H9_testicular_Wilms_hepatoblastoma_neuroblastoma |
Association with transcript: | 58bp_to_ENST00000370606_5end |
EntrezGene: | ZIC3 |
HGNC: | 12874 |
UniProt: | Q5JY75 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.50e-76 | 5 |
melanocyte | 2.03e-14 | 10 |
melanoblast | 2.03e-14 | 10 |
columnar/cuboidal epithelial cell | 4.02e-14 | 27 |
neurecto-epithelial cell | 1.53e-12 | 20 |
pigment cell | 1.78e-10 | 14 |
migratory neural crest cell | 7.38e-09 | 41 |
neurectodermal cell | 9.77e-09 | 59 |
ecto-epithelial cell | 1.74e-07 | 34 |
ectodermal cell | 3.76e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.73e-11 | 22 |
germ cell cancer | 1.73e-11 | 22 |