FFCP PHASE1:Hg19::chr17:34313752..34313774,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:34313752..34313774,- to FFCP PHASE1:Hg19::chr17:34313752..34313774,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6358 | |EntrezGene=6358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10612 | |HGNC=10612 | ||
|TSSclassifier=strong | |||
|UniProt=Q16627 | |UniProt=Q16627 | ||
|association_with_transcript=0bp_to_ENST00000435911,NM_032962,NM_032963,uc002hkn.2,uc010wcq.1,uc010wcr.1_5end | |||
|cluster_id=chr17:34313752..34313774,- | |||
|description=CAGE_peak_1_at_CCL14_5end | |||
|id=chr17:34313752..34313774,- | |||
|ontology_enrichment_celltype=CL:0000115!4.55e-28!35;CL:0002139!2.48e-23!24;CL:0002078!4.66e-21!44;CL:0000071!1.14e-18!18;CL:0002546!1.14e-18!18;CL:0000213!1.45e-13!57;CL:0000215!1.45e-13!57;CL:1000413!1.30e-10!9;CL:0002544!1.24e-07!6;CL:0002543!1.53e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.83e-28;36!CL:0002139;2.59e-28;24!CL:0000071;1.50e-22;18!CL:0002078;4.49e-16;45!CL:1000413;1.16e-12;9!CL:0000213;1.92e-10;58!CL:0000215;1.92e-10;58!CL:0002544;5.14e-09;6!CL:0002543;6.75e-09;6!CL:0002138;2.43e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.84e-33,36;CL:0002139,2.75e-28,24;CL:0002078,1.70e-24,45;CL:0000071,1.47e-22,18;CL:0002546,1.47e-22,18;CL:0000213,1.35e-16,58;CL:0000215,1.35e-16,58;CL:1000413,1.16e-12,9;CL:0002544,5.18e-09,6;CL:0002543,6.66e-09,6;CL:0005020,2.62e-07,6;CL:0002138,2.62e-07,6;CL:0005022,2.62e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.50e-22;18!UBERON:0004872;1.84e-07;7!CL:0005022;2.43e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.84e-52!115;UBERON:0004111!1.70e-22!241;UBERON:0000477!1.92e-20!286;UBERON:0000025!3.21e-19!194;UBERON:0001986!1.14e-18!18;UBERON:0004638!1.14e-18!18;UBERON:0004852!1.14e-18!18;UBERON:0000487!1.99e-15!22;UBERON:0006914!4.33e-14!25;UBERON:0001049!2.91e-12!57;UBERON:0005068!2.91e-12!57;UBERON:0006241!2.91e-12!57;UBERON:0007135!2.91e-12!57;UBERON:0000467!2.32e-11!625;UBERON:0000480!2.89e-11!626;UBERON:0000468!5.71e-11!659;UBERON:0003915!1.30e-10!9;UBERON:0004700!1.30e-10!9;UBERON:0001917!1.30e-10!9;UBERON:0000055!2.42e-10!69;UBERON:0000483!3.01e-10!309;UBERON:0000119!3.06e-10!312;UBERON:0003914!6.97e-10!118;UBERON:0003075!8.44e-10!86;UBERON:0007284!8.44e-10!86;UBERON:0003080!1.30e-09!42;UBERON:0004872!1.86e-09!84;UBERON:0002616!5.01e-09!59;UBERON:0002346!7.40e-09!90;UBERON:0002780!7.81e-09!41;UBERON:0001890!7.81e-09!41;UBERON:0006240!7.81e-09!41;UBERON:0002049!2.76e-08!79;UBERON:0007798!2.76e-08!79;UBERON:0001009!4.59e-08!113;UBERON:0000922!4.96e-08!612;UBERON:0001017!9.22e-08!82;UBERON:0002050!1.10e-07!605;UBERON:0005423!1.10e-07!605;UBERON:0003103!1.13e-07!69;UBERON:0005743!1.45e-07!86;UBERON:0002465!1.51e-07!10;UBERON:0001981!1.61e-07!60;UBERON:0007500!1.61e-07!60;UBERON:0004537!1.61e-07!60;UBERON:0006965!1.61e-07!60;UBERON:0000955!1.96e-07!69;UBERON:0006238!1.96e-07!69;UBERON:0000923!2.44e-07!604;UBERON:0005291!2.44e-07!604;UBERON:0006598!2.44e-07!604;UBERON:0002532!2.44e-07!604;UBERON:0000062!3.81e-07!511;UBERON:0004535!6.07e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.50e-22;18!UBERON:0001986;1.50e-22;18!UBERON:0004852;1.50e-22;18!UBERON:0000487;2.37e-17;22!UBERON:0006914;1.44e-14;25!UBERON:0003915;1.16e-12;9!UBERON:0004700;1.16e-12;9!UBERON:0001917;1.16e-12;9!UBERON:0007023;3.22e-09;114!UBERON:0000490;4.57e-09;33!UBERON:0001638;1.09e-07;9!UBERON:0003920;1.09e-07;9!UBERON:0004582;1.09e-07;9!UBERON:0000922;1.50e-07;49!UBERON:0002465;2.01e-07;10!UBERON:0000055;3.99e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.28e-33,114;UBERON:0004638,1.47e-22,18;UBERON:0001986,1.47e-22,18;UBERON:0004852,1.47e-22,18;UBERON:0000487,2.33e-17,22;UBERON:0006914,1.42e-14,25;UBERON:0004111,4.03e-14,240;UBERON:0000055,5.91e-13,68;UBERON:0003915,1.16e-12,9;UBERON:0004700,1.16e-12,9;UBERON:0001917,1.16e-12,9;UBERON:0004872,2.33e-12,83;UBERON:0003914,6.79e-12,117;UBERON:0000025,2.54e-10,192;UBERON:0001009,4.46e-10,112;UBERON:0007500,4.50e-10,59;UBERON:0001981,4.50e-10,59;UBERON:0004537,4.50e-10,59;UBERON:0006965,4.50e-10,59;UBERON:0002049,4.52e-10,78;UBERON:0007798,4.52e-10,78;UBERON:0003103,4.58e-09,68;UBERON:0004535,1.16e-08,109;UBERON:0001638,1.08e-07,9;UBERON:0003920,1.08e-07,9;UBERON:0004582,1.08e-07,9;UBERON:0002465,2.13e-07,10;UBERON:0003887,7.40e-07,12 | |||
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| ||
|short_description=p1@CCL14 | |||
}} | }} |
Latest revision as of 16:07, 19 September 2015
Short description: | p1@CCL14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCL14_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000435911, NM_032962, NM_032963, uc002hkn.2, uc010wcq.1, uc010wcr.1_5end |
EntrezGene: | CCL14 |
HGNC: | 10612 |
UniProt: | Q16627 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.84e-33 | 36 |
endothelial cell of vascular tree | 2.75e-28 | 24 |
meso-epithelial cell | 1.70e-24 | 45 |
blood vessel endothelial cell | 1.47e-22 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.47e-22 | 18 |
lining cell | 1.35e-16 | 58 |
barrier cell | 1.35e-16 | 58 |
endothelial cell of artery | 1.16e-12 | 9 |
aortic endothelial cell | 5.18e-09 | 6 |
vein endothelial cell | 6.66e-09 | 6 |
lymphangioblast | 2.62e-07 | 6 |
endothelial cell of lymphatic vessel | 2.62e-07 | 6 |
vascular lymphangioblast | 2.62e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.28e-33 | 114 |
blood vessel endothelium | 1.47e-22 | 18 |
endothelium | 1.47e-22 | 18 |
cardiovascular system endothelium | 1.47e-22 | 18 |
simple squamous epithelium | 2.33e-17 | 22 |
squamous epithelium | 1.42e-14 | 25 |
anatomical conduit | 4.03e-14 | 240 |
vessel | 5.91e-13 | 68 |
endothelial tube | 1.16e-12 | 9 |
arterial system endothelium | 1.16e-12 | 9 |
endothelium of artery | 1.16e-12 | 9 |
splanchnic layer of lateral plate mesoderm | 2.33e-12 | 83 |
epithelial tube | 6.79e-12 | 117 |
tube | 2.54e-10 | 192 |
circulatory system | 4.46e-10 | 112 |
epithelial tube open at both ends | 4.50e-10 | 59 |
blood vessel | 4.50e-10 | 59 |
blood vasculature | 4.50e-10 | 59 |
vascular cord | 4.50e-10 | 59 |
vasculature | 4.52e-10 | 78 |
vascular system | 4.52e-10 | 78 |
compound organ | 4.58e-09 | 68 |
cardiovascular system | 1.16e-08 | 109 |
vein | 1.08e-07 | 9 |
venous blood vessel | 1.08e-07 | 9 |
venous system | 1.08e-07 | 9 |
lymphoid system | 2.13e-07 | 10 |
intraembryonic coelom | 7.40e-07 | 12 |