FFCP PHASE1:Hg19::chr8:98900255..98900325,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4147 | |EntrezGene=4147 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6908 | |HGNC=6908 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=50bp_to_ENST00000520016,uc003yie.1_5end | |association_with_transcript=50bp_to_ENST00000520016,uc003yie.1_5end | ||
|cluster_id=chr8:98900255..98900325,+ | |||
|description=CAGE_peak_2_at_MATN2_5end | |description=CAGE_peak_2_at_MATN2_5end | ||
|id=chr8:98900255..98900325,+ | |id=chr8:98900255..98900325,+ | ||
|ontology_enrichment_celltype=CL:0000077!6.14e-21!19;CL:0000222!7.19e-07!119 | |ontology_enrichment_celltype=CL:0000077!6.14e-21!19;CL:0000222!7.19e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000077;3.39e-39;19!CL:0000149;1.78e-11;4!CL:1000306;3.19e-10;4!CL:0002547;3.19e-10;4!CL:0002586;1.49e-09;3!CL:0000174;3.43e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.76e-39,19;CL:0000149,1.96e-11,4;CL:1000306,4.58e-10,4;CL:0002547,4.58e-10,4;CL:0000213,1.07e-09,58;CL:0000215,1.07e-09,58;CL:0002586,1.49e-09,3;CL:0000222,3.42e-09,121;CL:0000174,3.48e-09,3;CL:0000076,1.38e-08,63 | |||
|ontology_enrichment_development_v019=UBERON:0007123;5.86e-09;5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!1.50e-11!11;UBERON:0000020!2.47e-08!23;UBERON:0000119!3.56e-08!312;UBERON:0001032!8.89e-08!24;UBERON:0004456!8.89e-08!24;UBERON:0000970!1.20e-07!20;UBERON:0000483!1.82e-07!309;UBERON:0005631!2.41e-07!14;UBERON:0000158!2.41e-07!14;UBERON:0000019!3.35e-07!19;UBERON:0000047!3.35e-07!19;UBERON:0004088!3.35e-07!19;UBERON:0003072!3.35e-07!19;UBERON:0003071!3.35e-07!19;UBERON:0004128!3.35e-07!19;UBERON:0004871!3.47e-07!8;UBERON:0002104!4.44e-07!21;UBERON:0002200!5.03e-07!11;UBERON:0006876!5.03e-07!11 | |ontology_enrichment_uberon=UBERON:0007625!1.50e-11!11;UBERON:0000020!2.47e-08!23;UBERON:0000119!3.56e-08!312;UBERON:0001032!8.89e-08!24;UBERON:0004456!8.89e-08!24;UBERON:0000970!1.20e-07!20;UBERON:0000483!1.82e-07!309;UBERON:0005631!2.41e-07!14;UBERON:0000158!2.41e-07!14;UBERON:0000019!3.35e-07!19;UBERON:0000047!3.35e-07!19;UBERON:0004088!3.35e-07!19;UBERON:0003072!3.35e-07!19;UBERON:0003071!3.35e-07!19;UBERON:0004128!3.35e-07!19;UBERON:0004871!3.47e-07!8;UBERON:0002104!4.44e-07!21;UBERON:0002200!5.03e-07!11;UBERON:0006876!5.03e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.10e-18;11!UBERON:0004797;3.19e-10;4!UBERON:0000415;3.19e-10;4!UBERON:0007240;3.19e-10;4!UBERON:0005742;3.19e-10;4!UBERON:0005734;3.19e-10;4!UBERON:0004664;3.19e-10;4!UBERON:0004663;3.19e-10;4!UBERON:0000019;7.37e-10;19!UBERON:0000047;7.37e-10;19!UBERON:0004088;7.37e-10;19!UBERON:0010230;7.37e-10;19!UBERON:0000020;1.48e-09;23!UBERON:0001781;1.49e-09;3!UBERON:0001782;1.49e-09;3!UBERON:0000970;2.83e-09;20!UBERON:0001032;4.53e-09;24!UBERON:0004456;4.53e-09;24!UBERON:0002046;5.86e-09;5!UBERON:0002104;9.55e-09;21!UBERON:0001456;9.55e-09;21!UBERON:0010371;8.51e-08;31!UBERON:0006876;9.23e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.75e-18,11;UBERON:0000415,4.58e-10,4;UBERON:0007240,4.58e-10,4;UBERON:0005742,4.58e-10,4;UBERON:0005734,4.58e-10,4;UBERON:0004664,4.58e-10,4;UBERON:0004663,4.58e-10,4;UBERON:0001782,1.49e-09,3;UBERON:0005424,1.49e-09,3;UBERON:0000019,2.58e-09,20;UBERON:0000047,2.58e-09,20;UBERON:0010312,2.58e-09,20;UBERON:0004088,2.58e-09,20;UBERON:0010230,2.58e-09,20;UBERON:0003072,2.58e-09,20;UBERON:0004128,2.58e-09,20;UBERON:0003071,2.58e-09,20;UBERON:0000020,4.60e-09,24;UBERON:0001032,4.60e-09,24;UBERON:0004456,4.60e-09,24;UBERON:0002046,5.02e-09,5;UBERON:0004117,5.02e-09,5;UBERON:0007689,5.02e-09,5;UBERON:0007123,5.02e-09,5;UBERON:0003091,5.02e-09,5;UBERON:0000970,8.73e-09,21;UBERON:0002104,8.73e-09,21;UBERON:0004797,1.93e-08,7;UBERON:0001456,2.65e-08,22;UBERON:0006876,9.36e-08,11;UBERON:0001781,3.12e-07,4 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0,0.697801167972428,0.218441372130172,0.263766978228454,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0.85870796139317,0.684372125364421,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83587685530591,0,0,0,0,0,0.945348171640679,2.88248216701333,2.54720878510066,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44905874525234,0.112611480483322,0,0,0,0,0,0,0,2.15271869829786,2.51577443545116,3.15520282823695,1.06400514659507,4.48542080113846,0,0.24666754841716,0.311211035399766,0.134710672069688,0.490385709340376,0.454072282934794,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94923676216055,0.179389635688862,0,0,0,0,0,0.18611685633159,0.337552664482532,0,0,0,1.2931684545505,0,0,0.339121184620975,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0.245976877086227,5.14703430895577,0,0,0.100528972411631,0,0,0,2.88662684050547,0.115930404975077,2.23076519048061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20137223137567,0,0.112131084345361,2.61576041299968,0.1466765716419,6.33431407213111,0,0,1.59562869950922,2.08014873822732,0,0,0,0.285955987316295,1.62786481617433,0,0,0.710783897485092,0,7.23454504943007,0.871533458600294,4.89867656792079,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,5.44302527993425,0,0.460385919864187,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0.182091168006717,0,0,0,0,0,0,0,0,0.431831832204279,0,0,1.00337954770971,0,0,0,0,0,23.8498616358242,26.5691863016762,28.6332987304587,0,0.183138929636687,0.247528499761764,0,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.286249773483982,0.744316738719335,2.53103539774981,4.76575484809562,0,0,0,0,3.95719406683292,2.19629623788844,0.589062011728432,0.202182481573316,0,0,0,0.731140468893853,0,0.818999468447914,0,0,0.551365343546124,0,0.876901770507525,0,0,1.62328301570163,0,0.845086807596724,7.60080166681473,12.8706243727189,0.35667105148125,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.52408440419239,0.71623345421307,2.67268212749375,0.307160702099232,0,0,0,0,0,0.398495976502139,0.552567831062295,0,0.102268682502155,0,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.0769502585037971,1.25336261431701,0,0,0.108647371922008,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0.599428828746391,0,0,0,0,0,0,4.62074300650288,6.06696508611533,0,1.15580235960608,0,0,0,12.4631978011788,0,1.11712960508902,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.134366944973453,0,0,0.157566364614447,0.164831716762333,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.315222829196793,0,0.422401346077626,0,0,0,0,0,0,0,0,5.98650957812437,0,0.170388021785422,0.566560457600628,0,1.32506888912221,0,0,0,0,0.106787412567695,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.332787154610557,0,0,0.249960815924213,3.4879297034579,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0.159296767163702,0,0.155262956876259,0,0.265841714557995,1.04349012362347,0.450772826991655,15.9938189110894,2.44122439922797,0.363697318405119,3.00749559718968,0.464033759878494,0.796191777397232,0,0,0,1.26184898228651,4.62287592977528,34.3106546199881,4.17590867144339,49.6485976871876,10.8815562932202,33.2841918128796,35.280501693053,4.94082315457555,51.5317516509962,54.4202569513314,60.7679220553382,14.022222574205,0.512483037175893,17.9623777700223,14.281417940337,0,0,0,0,0,0.491545817507439,0,0,0,0,5.67515953566836,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0.80057074828547,0,1.8374728641192,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0.11796972334774,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,1.47394725759087,0,0,0,0,0,0.546974809018219,0,0.992422356778588,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0,0.156986185701028,0,0,0.913158720509496,0.863710364874486,0,0.714765441766563,0.158013611732727,1.27865567904938,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0.11294608203896,0,0,0.154348316215889,0,0,0.245148321753905,0,0,0.297046400327086,1.2679671827502,0,0,0.257831551894309,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0.37199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|phase1_expression=0.726713517082227,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0,0.697801167972428,0.218441372130172,0.263766978228454,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0.85870796139317,0.684372125364421,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83587685530591,0,0,0,0,0,0.945348171640679,2.88248216701333,2.54720878510066,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44905874525234,0.112611480483322,0,0,0,0,0,0,0,2.15271869829786,2.51577443545116,3.15520282823695,1.06400514659507,4.48542080113846,0,0.24666754841716,0.311211035399766,0.134710672069688,0.490385709340376,0.454072282934794,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94923676216055,0.179389635688862,0,0,0,0,0,0.18611685633159,0.337552664482532,0,0,0,1.2931684545505,0,0,0.339121184620975,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0.245976877086227,5.14703430895577,0,0,0.100528972411631,0,0,0,2.88662684050547,0.115930404975077,2.23076519048061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20137223137567,0,0.112131084345361,2.61576041299968,0.1466765716419,6.33431407213111,0,0,1.59562869950922,2.08014873822732,0,0,0,0.285955987316295,1.62786481617433,0,0,0.710783897485092,0,7.23454504943007,0.871533458600294,4.89867656792079,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,5.44302527993425,0,0.460385919864187,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0.182091168006717,0,0,0,0,0,0,0,0,0.431831832204279,0,0,1.00337954770971,0,0,0,0,0,23.8498616358242,26.5691863016762,28.6332987304587,0,0.183138929636687,0.247528499761764,0,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.286249773483982,0.744316738719335,2.53103539774981,4.76575484809562,0,0,0,0,3.95719406683292,2.19629623788844,0.589062011728432,0.202182481573316,0,0,0,0.731140468893853,0,0.818999468447914,0,0,0.551365343546124,0,0.876901770507525,0,0,1.62328301570163,0,0.845086807596724,7.60080166681473,12.8706243727189,0.35667105148125,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.52408440419239,0.71623345421307,2.67268212749375,0.307160702099232,0,0,0,0,0,0.398495976502139,0.552567831062295,0,0.102268682502155,0,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.0769502585037971,1.25336261431701,0,0,0.108647371922008,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0.599428828746391,0,0,0,0,0,0,4.62074300650288,6.06696508611533,0,1.15580235960608,0,0,0,12.4631978011788,0,1.11712960508902,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.134366944973453,0,0,0.157566364614447,0.164831716762333,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.315222829196793,0,0.422401346077626,0,0,0,0,0,0,0,0,5.98650957812437,0,0.170388021785422,0.566560457600628,0,1.32506888912221,0,0,0,0,0.106787412567695,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.332787154610557,0,0,0.249960815924213,3.4879297034579,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0.159296767163702,0,0.155262956876259,0,0.265841714557995,1.04349012362347,0.450772826991655,15.9938189110894,2.44122439922797,0.363697318405119,3.00749559718968,0.464033759878494,0.796191777397232,0,0,0,1.26184898228651,4.62287592977528,34.3106546199881,4.17590867144339,49.6485976871876,10.8815562932202,33.2841918128796,35.280501693053,4.94082315457555,51.5317516509962,54.4202569513314,60.7679220553382,14.022222574205,0.512483037175893,17.9623777700223,14.281417940337,0,0,0,0,0,0.491545817507439,0,0,0,0,5.67515953566836,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0.80057074828547,0,1.8374728641192,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0.11796972334774,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,1.47394725759087,0,0,0,0,0,0.546974809018219,0,0.992422356778588,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0,0.156986185701028,0,0,0.913158720509496,0.863710364874486,0,0.714765441766563,0.158013611732727,1.27865567904938,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0.11294608203896,0,0,0.154348316215889,0,0,0.245148321753905,0,0,0.297046400327086,1.2679671827502,0,0,0.257831551894309,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0.37199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| ||
|short_description=p2@MATN2 | |short_description=p2@MATN2 | ||
}} | }} |
Latest revision as of 16:12, 19 September 2015
Short description: | p2@MATN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MATN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 50bp_to_ENST00000520016, uc003yie.1_5end |
EntrezGene: | MATN2 |
HGNC: | 6908 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.76e-39 | 19 |
visual pigment cell | 1.96e-11 | 4 |
fibroblast of tunica adventitia of artery | 4.58e-10 | 4 |
fibroblast of the aortic adventitia | 4.58e-10 | 4 |
lining cell | 1.07e-09 | 58 |
barrier cell | 1.07e-09 | 58 |
retinal pigment epithelial cell | 1.49e-09 | 3 |
mesodermal cell | 3.42e-09 | 121 |
steroid hormone secreting cell | 3.48e-09 | 3 |
squamous epithelial cell | 1.38e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 1.75e-18 | 11 |
artery wall | 4.58e-10 | 4 |
tunica adventitia of artery | 4.58e-10 | 4 |
adventitia | 4.58e-10 | 4 |
tunica adventitia of blood vessel | 4.58e-10 | 4 |
aorta tunica adventitia | 4.58e-10 | 4 |
aorta wall | 4.58e-10 | 4 |
pigmented layer of retina | 1.49e-09 | 3 |
presumptive retinal pigmented epithelium | 1.49e-09 | 3 |
camera-type eye | 2.58e-09 | 20 |
simple eye | 2.58e-09 | 20 |
immature eye | 2.58e-09 | 20 |
ocular region | 2.58e-09 | 20 |
eyeball of camera-type eye | 2.58e-09 | 20 |
optic cup | 2.58e-09 | 20 |
optic vesicle | 2.58e-09 | 20 |
eye primordium | 2.58e-09 | 20 |
sense organ | 4.60e-09 | 24 |
sensory system | 4.60e-09 | 24 |
entire sense organ system | 4.60e-09 | 24 |
thyroid gland | 5.02e-09 | 5 |
pharyngeal pouch | 5.02e-09 | 5 |
thyroid diverticulum | 5.02e-09 | 5 |
pharyngeal pouch 2 | 5.02e-09 | 5 |
thyroid primordium | 5.02e-09 | 5 |
eye | 8.73e-09 | 21 |
visual system | 8.73e-09 | 21 |
blood vessel layer | 1.93e-08 | 7 |
face | 2.65e-08 | 22 |
vasculature of organ | 9.36e-08 | 11 |
layer of retina | 3.12e-07 | 4 |