FFCP PHASE1:Hg19::chr7:79998905..79998917,+: Difference between revisions
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|id=chr7:79998905..79998917,+
|short_description=p26@CD36
|description=CAGE_peak_26_at_CD36_5end
|association_with_transcript=14bp_to_ENST00000435819,uc003uhc.2_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=948 | |EntrezGene=948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1663 | |HGNC=1663 | ||
|TSSclassifier=strong | |||
|UniProt=P16671 | |UniProt=P16671 | ||
|association_with_transcript=14bp_to_ENST00000435819,uc003uhc.2_5end | |||
|cluster_id=chr7:79998905..79998917,+ | |||
|coexpression_cluster_id=C557 | |||
|description=CAGE_peak_26_at_CD36_5end | |||
|id=chr7:79998905..79998917,+ | |||
|ontology_enrichment_celltype=CL:0005020!6.66e-39!6;CL:0002138!6.66e-39!6;CL:0005022!6.66e-39!6;CL:0002139!2.70e-16!24;CL:0000115!8.51e-11!35;CL:0002144!1.18e-09!3;CL:0002078!2.42e-08!44 | |||
|ontology_enrichment_celltype_v019=CL:0002138;3.75e-74;6!CL:0002139;1.33e-33;24!CL:0000115;3.52e-18;36!CL:0002144;8.70e-18;3!CL:0002078;8.89e-15;45!CL:0000213;4.97e-11;58!CL:0000215;4.97e-11;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,4.26e-74,6;CL:0002138,4.26e-74,6;CL:0005022,4.26e-74,6;CL:0002139,1.33e-33,24;CL:0000115,9.32e-23,36;CL:0002078,2.09e-18,45;CL:0002144,8.00e-18,3;CL:0000213,1.72e-14,58;CL:0000215,1.72e-14,58;CL:0000222,2.26e-07,121 | |||
|ontology_enrichment_development_v019=CL:0005022;3.75e-74;6 | |||
|ontology_enrichment_disease=DOID:3371!1.01e-07!1;DOID:4549!1.01e-07!1;DOID:5861!1.01e-07!1;DOID:6496!1.01e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!2.26e-31!10;UBERON:0001473!4.57e-29!8;UBERON:0004536!4.57e-29!8;UBERON:0006558!4.57e-29!8;UBERON:0003127!1.98e-13!2;UBERON:0001915!1.18e-09!3;UBERON:0001982!1.18e-09!3;UBERON:0000029!5.58e-08!1;UBERON:0002426!6.37e-08!1;UBERON:0003831!6.37e-08!1;UBERON:0003898!6.37e-08!1;UBERON:0004830!6.37e-08!1;UBERON:0001774!6.37e-08!1;UBERON:0003830!6.37e-08!1;UBERON:0005175!6.37e-08!1;UBERON:0003897!6.37e-08!1;UBERON:0001103!6.37e-08!1;UBERON:0010084!6.37e-08!1;UBERON:0007029!8.84e-08!1;UBERON:0001301!2.04e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;6.07e-56;8!UBERON:0004536;6.07e-56;8!UBERON:0006558;6.07e-56;8!UBERON:0002465;5.23e-45;10!UBERON:0010523;8.70e-18;3!UBERON:0001915;8.70e-18;3!UBERON:0001982;8.70e-18;3!UBERON:0002405;2.27e-17;27!UBERON:0002193;4.74e-11;42!UBERON:0000055;6.71e-11;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,6.66e-56,8;UBERON:0004536,6.66e-56,8;UBERON:0006558,6.66e-56,8;UBERON:0002465,5.64e-45,10;UBERON:0010523,8.00e-18,3;UBERON:0001915,8.00e-18,3;UBERON:0001982,8.00e-18,3;UBERON:0000055,1.71e-12,68;UBERON:0002049,5.31e-11,78;UBERON:0007798,5.31e-11,78;UBERON:0004535,4.22e-08,109;UBERON:0001009,6.64e-08,112 | |||
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|short_description=p26@CD36 | |||
}} | }} |
Latest revision as of 16:19, 19 September 2015
Short description: | p26@CD36 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_CD36_5end |
Coexpression cluster: | C557_Lymphatic_Endothelial_mesothelioma_pleomorphic_Cardiac_lung_aorta |
Association with transcript: | 14bp_to_ENST00000435819, uc003uhc.2_5end |
EntrezGene: | CD36 |
HGNC: | 1663 |
UniProt: | P16671 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 4.26e-74 | 6 |
endothelial cell of lymphatic vessel | 4.26e-74 | 6 |
vascular lymphangioblast | 4.26e-74 | 6 |
endothelial cell of vascular tree | 1.33e-33 | 24 |
endothelial cell | 9.32e-23 | 36 |
meso-epithelial cell | 2.09e-18 | 45 |
capillary endothelial cell | 8.00e-18 | 3 |
lining cell | 1.72e-14 | 58 |
barrier cell | 1.72e-14 | 58 |
mesodermal cell | 2.26e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 6.66e-56 | 8 |
lymph vasculature | 6.66e-56 | 8 |
lymphatic part of lymphoid system | 6.66e-56 | 8 |
lymphoid system | 5.64e-45 | 10 |
microcirculatory vessel | 8.00e-18 | 3 |
endothelium of capillary | 8.00e-18 | 3 |
capillary | 8.00e-18 | 3 |
vessel | 1.71e-12 | 68 |
vasculature | 5.31e-11 | 78 |
vascular system | 5.31e-11 | 78 |
cardiovascular system | 4.22e-08 | 109 |
circulatory system | 6.64e-08 | 112 |