FFCP PHASE1:Hg19::chr1:89641680..89641701,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388646 | |EntrezGene=388646 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29606 | |HGNC=29606 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N8V2 | |UniProt=Q8N8V2 | ||
|association_with_transcript=21bp_to_ENST00000294671,NM_207398,uc001dna.2_5end | |association_with_transcript=21bp_to_ENST00000294671,NM_207398,uc001dna.2_5end | ||
|cluster_id=chr1:89641680..89641701,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_GBP7_5end | |description=CAGE_peak_1_at_GBP7_5end | ||
|id=chr1:89641680..89641701,- | |id=chr1:89641680..89641701,- | ||
|ontology_enrichment_celltype=CL:0000181!7.30e-22!12;CL:0000417!7.30e-22!12;CL:0000668!7.30e-22!12;CL:0000414!7.30e-22!12;CL:0000412!7.30e-22!12;CL:0000182!7.30e-22!12 | |ontology_enrichment_celltype=CL:0000181!7.30e-22!12;CL:0000417!7.30e-22!12;CL:0000668!7.30e-22!12;CL:0000414!7.30e-22!12;CL:0000412!7.30e-22!12;CL:0000182!7.30e-22!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.52e-25;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.52e-25,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.31e-24!19;UBERON:0006925!3.31e-24!19;UBERON:0008836!3.31e-24!19;UBERON:0008835!5.39e-21!22;UBERON:0003894!5.39e-21!22;UBERON:0009854!4.14e-20!23;UBERON:0007499!1.50e-18!25;UBERON:0009497!1.50e-18!25;UBERON:0000015!1.50e-18!25;UBERON:0002423!1.50e-18!25;UBERON:0006235!1.50e-18!25;UBERON:0004161!1.50e-18!25;UBERON:0005057!7.34e-18!26;UBERON:0009856!7.34e-18!26;UBERON:0002365!4.49e-15!31;UBERON:0002330!4.49e-15!31;UBERON:0002368!2.05e-13!35;UBERON:0000949!1.52e-10!45;UBERON:0003929!7.27e-09!54;UBERON:0005172!1.03e-08!55;UBERON:0005173!1.03e-08!55;UBERON:0002530!3.77e-08!59;UBERON:0002417!6.76e-08!61;UBERON:0000916!6.76e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.07e-28;19!UBERON:0006925;4.07e-28;19!UBERON:0002423;1.50e-21;25!UBERON:0002365;4.47e-18;31!UBERON:0002330;4.47e-18;31!UBERON:0002368;1.44e-14;33!UBERON:0000949;3.13e-12;43!UBERON:0005172;4.97e-09;52!UBERON:0005173;4.97e-09;52!UBERON:0002530;8.00e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.07e-28,19;UBERON:0006925,4.07e-28,19;UBERON:0008836,4.07e-28,19;UBERON:0008835,2.18e-24,22;UBERON:0003894,2.18e-24,22;UBERON:0009854,2.32e-23,23;UBERON:0007499,1.50e-21,25;UBERON:0009497,1.50e-21,25;UBERON:0000015,1.50e-21,25;UBERON:0002423,1.50e-21,25;UBERON:0006235,1.50e-21,25;UBERON:0004161,1.50e-21,25;UBERON:0009856,9.49e-21,26;UBERON:0002365,1.63e-17,31;UBERON:0002330,1.63e-17,31;UBERON:0002368,1.37e-15,35;UBERON:0000949,2.91e-12,45;UBERON:0003929,2.58e-10,54;UBERON:0005172,2.58e-10,54;UBERON:0005173,2.58e-10,54;UBERON:0002530,1.74e-09,59;UBERON:0002417,2.45e-09,60;UBERON:0000916,2.45e-09,60;UBERON:0005911,5.81e-07,82 | |||
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|short_description=p1@GBP7 | |short_description=p1@GBP7 | ||
}} | }} |
Latest revision as of 16:45, 19 September 2015
Short description: | p1@GBP7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GBP7_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 21bp_to_ENST00000294671, NM_207398, uc001dna.2_5end |
EntrezGene: | GBP7 |
HGNC: | 29606 |
UniProt: | Q8N8V2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.52e-25 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 4.07e-28 | 19 |
digestive gland | 4.07e-28 | 19 |
liver bud | 4.07e-28 | 19 |
hepatic diverticulum | 2.18e-24 | 22 |
liver primordium | 2.18e-24 | 22 |
digestive tract diverticulum | 2.32e-23 | 23 |
epithelial sac | 1.50e-21 | 25 |
epithelium of foregut-midgut junction | 1.50e-21 | 25 |
anatomical boundary | 1.50e-21 | 25 |
hepatobiliary system | 1.50e-21 | 25 |
foregut-midgut junction | 1.50e-21 | 25 |
septum transversum | 1.50e-21 | 25 |
sac | 9.49e-21 | 26 |
exocrine gland | 1.63e-17 | 31 |
exocrine system | 1.63e-17 | 31 |
endocrine gland | 1.37e-15 | 35 |
endocrine system | 2.91e-12 | 45 |
gut epithelium | 2.58e-10 | 54 |
abdomen element | 2.58e-10 | 54 |
abdominal segment element | 2.58e-10 | 54 |
gland | 1.74e-09 | 59 |
abdominal segment of trunk | 2.45e-09 | 60 |
abdomen | 2.45e-09 | 60 |
endo-epithelium | 5.81e-07 | 82 |