FFCP PHASE1:Hg19::chr7:80427431..80427440,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10512 | |EntrezGene=10512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10725 | |HGNC=10725 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=113bp_to_ENST00000475955_5end | |association_with_transcript=113bp_to_ENST00000475955_5end | ||
|cluster_id=chr7:80427431..80427440,- | |||
|coexpression_cluster_id=C1283 | |coexpression_cluster_id=C1283 | ||
|description=CAGE_peak_17_at_SEMA3C_5end | |description=CAGE_peak_17_at_SEMA3C_5end | ||
|id=chr7:80427431..80427440,- | |id=chr7:80427431..80427440,- | ||
|ontology_enrichment_celltype=CL:0000063!8.04e-07!578;CL:0000499!9.99e-07!27 | |ontology_enrichment_celltype=CL:0000063!8.04e-07!578;CL:0000499!9.99e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000214;1.69e-15;3!CL:0000346;7.01e-15;3!CL:1000428;7.01e-15;3!CL:0002559;2.68e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,1.69e-15,3;CL:0000346,7.02e-15,3;CL:1000428,7.02e-15,3;CL:0002559,2.68e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.06e-10!14;DOID:120!1.63e-09!27;DOID:193!1.63e-08!29 | |ontology_enrichment_disease=DOID:2394!5.06e-10!14;DOID:120!1.63e-09!27;DOID:193!1.63e-08!29 | ||
|ontology_enrichment_disease_v019=DOID:3369;8.62e-12;1!DOID:2394;2.35e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,6.26e-12,1;DOID:2394,3.19e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002199!9.12e-08!45;UBERON:0002416!9.12e-08!45;UBERON:0002097!1.16e-07!40;UBERON:0003102!9.07e-07!95 | |ontology_enrichment_uberon=UBERON:0002199!9.12e-08!45;UBERON:0002416!9.12e-08!45;UBERON:0002097!1.16e-07!40;UBERON:0003102!9.07e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0006915;1.69e-15;3!UBERON:0007616;1.69e-15;3!UBERON:0002217;1.69e-15;3!UBERON:0002018;1.69e-15;3!UBERON:0000412;7.01e-15;3!UBERON:0001992;7.01e-15;3!UBERON:0004457;2.50e-11;9!UBERON:0000042;2.50e-11;9!UBERON:0002073;2.68e-09;5!UBERON:0001003;8.12e-07;15!UBERON:0007376;8.12e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.69e-15,3;UBERON:0007616,1.69e-15,3;UBERON:0002217,1.69e-15,3;UBERON:0002018,1.69e-15,3;UBERON:0000412,7.02e-15,3;UBERON:0001992,7.02e-15,3;UBERON:0002073,2.68e-09,5;UBERON:0005086,2.68e-09,5;UBERON:0004457,1.27e-08,12;UBERON:0000042,1.27e-08,12;UBERON:0001003,8.81e-07,15;UBERON:0007376,8.81e-07,15;UBERON:0007383,8.81e-07,15 | |||
|phase1_expression=0.181678379270557,1.49870366723688,0.281908808191942,0,1.34088328328186,0.872338524100369,0,0,0.261185628199839,0,0.697801167972428,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.579386075843295,0,0,0.0945348171640679,0,0.175669571386252,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0.132409180813219,0.860509862246441,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.717558542755448,0,0.211931901159562,1.20036438433761,0.206105058476878,0.515281080091258,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,1.42003837006646,0.403008392910561,0,0,0.272746120590835,0,0,0,0,0,0,0,0,1.28648187638577,1.38134921352481,0.928735856063958,0,0,0.168584690078102,0,0,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,1.1240175325762,0.201057944823262,0.0925884451585296,0,0,2.88662684050547,0,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0.148631162288728,0,0.671928512795438,0.283550194484773,0.179117045405697,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.205654985406647,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.599837947092342,0,0,0,0,0,0,0,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0.713715955188647,0,0.117141414992713,0.300946099727719,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.128139149255701,0,0.64341568457443,0,0,0.177561725313127,0,0,0.116210378459959,0,1.20303882181971,0.184161977871793,0.229628896329213,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0.165284915360978,0.576570202095319,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0,1.58510321173008,0,0,0.487426979262569,0,0,0,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0.35667105148125,0,2.32218398827431,8.23237232399755,0,0,0.192444225451024,0,0,0,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0.121360521749513,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.843992258112108,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661983911750998,0,0,0.284609546029793,0.138674673013139,0.173559738335131,0,0,0.17472666824203,0.343972064943233,0,0,0,0,0.0882561266915003,0,0,0,0.0633107959558787,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0.305994652908965,0.288950589901519,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.340776043570843,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0,1.10961172300523,0.189403005275089,0.251567901752575,1.77962244319307,0,0.151230923763239,0.310874401165561,0.591420599958536,0.477890301491107,0.449803112163605,0,0.414706207840855,1.06336685823198,1.04349012362347,0.450772826991655,2.28483127301277,0.406870733204662,0.545545977607678,0.322231671127465,0,0.398095888698616,0,0.343395705182793,0,0,0,0.428883182749851,0,0.453411851024545,0.463044948647668,0,0,0.308801447160972,0.438568099157414,0,0.192914038270915,0.337884881306145,0,0,0,0,0.194860308839388,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0.231051332300676,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0.135939465953663,0,0.118193840883968,0,0,0,0,0.913158720509496,0.431855182437243,0,0,0,0,0,0,0,0.3414369541879,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0.743990036333503,0.924351257262837,1.73050624849516,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0.106727345877715,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |phase1_expression=0.181678379270557,1.49870366723688,0.281908808191942,0,1.34088328328186,0.872338524100369,0,0,0.261185628199839,0,0.697801167972428,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.579386075843295,0,0,0.0945348171640679,0,0.175669571386252,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0.132409180813219,0.860509862246441,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.717558542755448,0,0.211931901159562,1.20036438433761,0.206105058476878,0.515281080091258,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,1.42003837006646,0.403008392910561,0,0,0.272746120590835,0,0,0,0,0,0,0,0,1.28648187638577,1.38134921352481,0.928735856063958,0,0,0.168584690078102,0,0,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,1.1240175325762,0.201057944823262,0.0925884451585296,0,0,2.88662684050547,0,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0.148631162288728,0,0.671928512795438,0.283550194484773,0.179117045405697,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.205654985406647,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.599837947092342,0,0,0,0,0,0,0,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0.713715955188647,0,0.117141414992713,0.300946099727719,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.128139149255701,0,0.64341568457443,0,0,0.177561725313127,0,0,0.116210378459959,0,1.20303882181971,0.184161977871793,0.229628896329213,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0.165284915360978,0.576570202095319,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0,1.58510321173008,0,0,0.487426979262569,0,0,0,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0.35667105148125,0,2.32218398827431,8.23237232399755,0,0,0.192444225451024,0,0,0,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0.121360521749513,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.843992258112108,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661983911750998,0,0,0.284609546029793,0.138674673013139,0.173559738335131,0,0,0.17472666824203,0.343972064943233,0,0,0,0,0.0882561266915003,0,0,0,0.0633107959558787,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0.305994652908965,0.288950589901519,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.340776043570843,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0,1.10961172300523,0.189403005275089,0.251567901752575,1.77962244319307,0,0.151230923763239,0.310874401165561,0.591420599958536,0.477890301491107,0.449803112163605,0,0.414706207840855,1.06336685823198,1.04349012362347,0.450772826991655,2.28483127301277,0.406870733204662,0.545545977607678,0.322231671127465,0,0.398095888698616,0,0.343395705182793,0,0,0,0.428883182749851,0,0.453411851024545,0.463044948647668,0,0,0.308801447160972,0.438568099157414,0,0.192914038270915,0.337884881306145,0,0,0,0,0.194860308839388,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0.231051332300676,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0.135939465953663,0,0.118193840883968,0,0,0,0,0.913158720509496,0.431855182437243,0,0,0,0,0,0,0,0.3414369541879,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0.743990036333503,0.924351257262837,1.73050624849516,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0.106727345877715,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | ||
|short_description=p17@SEMA3C | |short_description=p17@SEMA3C | ||
}} | }} |
Latest revision as of 17:19, 19 September 2015
Short description: | p17@SEMA3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_SEMA3C_5end |
Coexpression cluster: | C1283_Synoviocyte_tenocyte_Fibroblast_Adipocyte_Ewing_Chondrocyte_Neurons |
Association with transcript: | 113bp_to_ENST00000475955_5end |
EntrezGene: | SEMA3C |
HGNC: | 10725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 1.69e-15 | 3 |
hair follicle dermal papilla cell | 7.02e-15 | 3 |
stem cell of epidermis | 7.02e-15 | 3 |
hair follicle cell | 2.68e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.69e-15 | 3 |
layer of synovial tissue | 1.69e-15 | 3 |
synovial joint | 1.69e-15 | 3 |
synovial membrane of synovial joint | 1.69e-15 | 3 |
dermal papilla | 7.02e-15 | 3 |
papillary layer of dermis | 7.02e-15 | 3 |
hair follicle | 2.68e-09 | 5 |
hair follicle placode | 2.68e-09 | 5 |
cavity lining | 1.27e-08 | 12 |
serous membrane | 1.27e-08 | 12 |
skin epidermis | 8.81e-07 | 15 |
outer epithelium | 8.81e-07 | 15 |
enveloping layer of ectoderm | 8.81e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 6.26e-12 | 1 |
ovarian cancer | 3.19e-07 | 14 |