FFCP PHASE1:Hg19::chr1:901847..901907,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84069 | |EntrezGene=84069 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25284 | |HGNC=25284 | ||
|TSSclassifier=strong | |||
|UniProt=Q494U1 | |UniProt=Q494U1 | ||
|association_with_transcript=0bp_to_ENST00000379407,ENST00000379409,ENST00000379410,NM_001160184,NM_032129,uc001acd.2,uc001ace.2,uc001acf.2_5end | |association_with_transcript=0bp_to_ENST00000379407,ENST00000379409,ENST00000379410,NM_001160184,NM_032129,uc001acd.2,uc001ace.2,uc001acf.2_5end | ||
|cluster_id=chr1:901847..901907,+ | |||
|description=CAGE_peak_1_at_PLEKHN1_5end | |description=CAGE_peak_1_at_PLEKHN1_5end | ||
|id=chr1:901847..901907,+ | |id=chr1:901847..901907,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.11e-28!254;CL:0000548!4.39e-18!679;CL:0000004!4.39e-18!679;CL:0000255!4.39e-18!679;CL:0000012!4.64e-17!682;CL:0002076!4.28e-16!43;CL:0000223!1.55e-14!59;CL:0000003!4.53e-14!722;CL:0000220!2.16e-13!246;CL:0002321!2.70e-13!248;CL:0000063!4.50e-12!578;CL:0000144!9.90e-09!625;CL:0002368!1.83e-08!13;CL:0002371!9.87e-08!591 | |ontology_enrichment_celltype=CL:0000066!1.11e-28!254;CL:0000548!4.39e-18!679;CL:0000004!4.39e-18!679;CL:0000255!4.39e-18!679;CL:0000012!4.64e-17!682;CL:0002076!4.28e-16!43;CL:0000223!1.55e-14!59;CL:0000003!4.53e-14!722;CL:0000220!2.16e-13!246;CL:0002321!2.70e-13!248;CL:0000063!4.50e-12!578;CL:0000144!9.90e-09!625;CL:0002368!1.83e-08!13;CL:0002371!9.87e-08!591 | ||
|ontology_enrichment_celltype_v019=CL:0002076;6.14e-13;42!CL:0002368;6.23e-09;13!CL:1000497;2.12e-07;17!CL:0002518;2.12e-07;17!CL:0002251;5.15e-07;20!CL:1000449;7.71e-07;15!CL:1000507;9.49e-07;10!CL:1000494;9.49e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.78e-29,253;CL:0002076,2.33e-17,42;CL:0000223,4.31e-15,58;CL:0002321,1.25e-11,250;CL:0002368,5.45e-09,13;CL:1000497,1.55e-07,17;CL:0002518,1.55e-07,17;CL:1000449,6.15e-07,15;CL:0002251,6.59e-07,20;CL:1000507,9.27e-07,10;CL:1000494,9.27e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000223;2.51e-08;58 | |||
|ontology_enrichment_disease=DOID:305!9.20e-09!106 | |ontology_enrichment_disease=DOID:305!9.20e-09!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.45e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0000926!2.63e-12!448;UBERON:0004120!2.63e-12!448;UBERON:0006603!2.63e-12!448;UBERON:0003104!8.19e-12!238;UBERON:0009142!8.19e-12!238;UBERON:0002100!5.46e-11!216;UBERON:0004119!1.04e-09!169;UBERON:0000925!1.04e-09!169;UBERON:0006595!1.04e-09!169;UBERON:0006554!3.41e-09!44;UBERON:0001008!7.10e-09!45;UBERON:0003102!1.03e-07!95;UBERON:0005256!2.20e-07!143;UBERON:0000464!2.56e-07!104;UBERON:0009569!4.27e-07!113;UBERON:0000077!7.75e-07!130;UBERON:0001004!8.60e-07!72;UBERON:0000466!9.55e-07!126;UBERON:0000468!9.70e-07!659 | |ontology_enrichment_uberon=UBERON:0000926!2.63e-12!448;UBERON:0004120!2.63e-12!448;UBERON:0006603!2.63e-12!448;UBERON:0003104!8.19e-12!238;UBERON:0009142!8.19e-12!238;UBERON:0002100!5.46e-11!216;UBERON:0004119!1.04e-09!169;UBERON:0000925!1.04e-09!169;UBERON:0006595!1.04e-09!169;UBERON:0006554!3.41e-09!44;UBERON:0001008!7.10e-09!45;UBERON:0003102!1.03e-07!95;UBERON:0005256!2.20e-07!143;UBERON:0000464!2.56e-07!104;UBERON:0009569!4.27e-07!113;UBERON:0000077!7.75e-07!130;UBERON:0001004!8.60e-07!72;UBERON:0000466!9.55e-07!126;UBERON:0000468!9.70e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;3.47e-09;30!UBERON:0001008;3.47e-09;30!UBERON:0006555;7.71e-07;15!UBERON:0004819;7.71e-07;15!UBERON:0001285;7.71e-07;15!UBERON:0007684;7.71e-07;15!UBERON:0004211;9.49e-07;10!UBERON:0009773;9.49e-07;10!UBERON:0001231;9.49e-07;10!UBERON:0004810;9.49e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006554,3.96e-11,47;UBERON:0002100,5.19e-11,199;UBERON:0001008,1.62e-10,48;UBERON:0003102,9.86e-08,99;UBERON:0005177,2.37e-07,101;UBERON:0009569,5.58e-07,112;UBERON:0004211,6.15e-07,15;UBERON:0009773,6.15e-07,15;UBERON:0001231,6.15e-07,15;UBERON:0001285,6.15e-07,15;UBERON:0007684,6.15e-07,15;UBERON:0004208,6.15e-07,15;UBERON:0006555,6.56e-07,16;UBERON:0004819,6.56e-07,16;UBERON:0004119,6.99e-07,160;UBERON:0000925,6.99e-07,160;UBERON:0006595,6.99e-07,160;UBERON:0004810,9.27e-07,10 | |||
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| ||
|short_description=p1@PLEKHN1 | |short_description=p1@PLEKHN1 | ||
}} | }} |
Latest revision as of 17:49, 19 September 2015
Short description: | p1@PLEKHN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLEKHN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000379407, ENST00000379409, ENST00000379410, NM_001160184, NM_032129, uc001acd.2, uc001ace.2, uc001acf.2_5end |
EntrezGene: | PLEKHN1 |
HGNC: | 25284 |
UniProt: | Q494U1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.78e-29 | 253 |
endo-epithelial cell | 2.33e-17 | 42 |
endodermal cell | 4.31e-15 | 58 |
embryonic cell | 1.25e-11 | 250 |
respiratory epithelial cell | 5.45e-09 | 13 |
kidney cell | 1.55e-07 | 17 |
kidney epithelial cell | 1.55e-07 | 17 |
epithelial cell of nephron | 6.15e-07 | 15 |
epithelial cell of alimentary canal | 6.59e-07 | 20 |
kidney tubule cell | 9.27e-07 | 10 |
nephron tubule epithelial cell | 9.27e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
urinary system structure | 3.96e-11 | 47 |
trunk | 5.19e-11 | 199 |
renal system | 1.62e-10 | 48 |
surface structure | 9.86e-08 | 99 |
trunk region element | 2.37e-07 | 101 |
subdivision of trunk | 5.58e-07 | 112 |
nephron epithelium | 6.15e-07 | 15 |
renal tubule | 6.15e-07 | 15 |
nephron tubule | 6.15e-07 | 15 |
nephron | 6.15e-07 | 15 |
uriniferous tubule | 6.15e-07 | 15 |
nephrogenic mesenchyme | 6.15e-07 | 15 |
excretory tube | 6.56e-07 | 16 |
kidney epithelium | 6.56e-07 | 16 |
endoderm-derived structure | 6.99e-07 | 160 |
endoderm | 6.99e-07 | 160 |
presumptive endoderm | 6.99e-07 | 160 |
nephron tubule epithelium | 9.27e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.45e-09 | 106 |