FFCP PHASE1:Hg19::chr1:20141728..20141745,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54546 | |EntrezGene=54546 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25978 | |HGNC=25978 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NXI6 | |UniProt=Q9NXI6 | ||
|association_with_transcript=25bp_to_ENST00000375121,NM_019062,uc001bcr.2_5end | |association_with_transcript=25bp_to_ENST00000375121,NM_019062,uc001bcr.2_5end | ||
|cluster_id=chr1:20141728..20141745,- | |||
|coexpression_cluster_id=C190 | |||
|description=CAGE_peak_3_at_RNF186_5end | |description=CAGE_peak_3_at_RNF186_5end | ||
|id=chr1:20141728..20141745,- | |id=chr1:20141728..20141745,- | ||
|ontology_enrichment_celltype=CL:0000313!4.87e-09!1 | |ontology_enrichment_celltype=CL:0000313!4.87e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0002535;8.09e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,8.09e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.63e-16;1!UBERON:0007297;4.89e-09;2 | |||
|ontology_enrichment_disease=DOID:2152!4.87e-09!1 | |ontology_enrichment_disease=DOID:2152!4.87e-09!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.42e-22!27;UBERON:0005409!5.27e-21!35;UBERON:0000059!1.44e-18!11;UBERON:0001155!7.32e-15!9;UBERON:0003135!7.40e-12!11;UBERON:0006947!8.36e-12!3;UBERON:0004054!8.36e-12!3;UBERON:0001301!1.21e-09!1;UBERON:0001154!2.16e-09!1;UBERON:0001153!2.16e-09!1;UBERON:0001000!2.55e-09!1;UBERON:0005352!2.55e-09!1;UBERON:0005904!4.51e-09!4;UBERON:0004911!4.87e-09!1;UBERON:0004907!2.01e-07!5;UBERON:0004921!7.49e-07!129;UBERON:0004185!7.49e-07!129 | |ontology_enrichment_uberon=UBERON:0000160!2.42e-22!27;UBERON:0005409!5.27e-21!35;UBERON:0000059!1.44e-18!11;UBERON:0001155!7.32e-15!9;UBERON:0003135!7.40e-12!11;UBERON:0006947!8.36e-12!3;UBERON:0004054!8.36e-12!3;UBERON:0001301!1.21e-09!1;UBERON:0001154!2.16e-09!1;UBERON:0001153!2.16e-09!1;UBERON:0001000!2.55e-09!1;UBERON:0005352!2.55e-09!1;UBERON:0005904!4.51e-09!4;UBERON:0004911!4.87e-09!1;UBERON:0004907!2.01e-07!5;UBERON:0004921!7.49e-07!129;UBERON:0004185!7.49e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.35e-53;17!UBERON:0005409;7.26e-42;22!UBERON:0000059;1.34e-34;11!UBERON:0002108;2.00e-28;4!UBERON:0001155;2.05e-27;9!UBERON:0004921;3.67e-26;33!UBERON:0001301;9.58e-17;1!UBERON:0001154;2.63e-16;1!UBERON:0001153;2.63e-16;1!UBERON:0009854;2.63e-16;1!UBERON:0004907;4.66e-13;5!UBERON:0001555;9.87e-11;54!UBERON:0006955;8.09e-09;2!UBERON:0004801;8.09e-09;2!UBERON:0001007;1.04e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.35e-53,17;UBERON:0005409,5.47e-37,25;UBERON:0000059,1.39e-34,11;UBERON:0002108,1.91e-28,4;UBERON:0001155,2.12e-27,9;UBERON:0001301,1.04e-16,1;UBERON:0001154,3.07e-16,1;UBERON:0001153,3.07e-16,1;UBERON:0001045,3.07e-16,1;UBERON:0004907,4.96e-13,5;UBERON:0006955,8.09e-09,2;UBERON:0004801,8.09e-09,2;UBERON:0004921,1.33e-07,118 | |||
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|short_description=p3@RNF186 | |short_description=p3@RNF186 | ||
}} | }} |
Latest revision as of 17:58, 19 September 2015
Short description: | p3@RNF186 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RNF186_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | 25bp_to_ENST00000375121, NM_019062, uc001bcr.2_5end |
EntrezGene: | RNF186 |
HGNC: | 25978 |
UniProt: | Q9NXI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 8.09e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.35e-53 | 17 |
gastrointestinal system | 5.47e-37 | 25 |
large intestine | 1.39e-34 | 11 |
small intestine | 1.91e-28 | 4 |
colon | 2.12e-27 | 9 |
epididymis | 1.04e-16 | 1 |
vermiform appendix | 3.07e-16 | 1 |
caecum | 3.07e-16 | 1 |
midgut | 3.07e-16 | 1 |
lower digestive tract | 4.96e-13 | 5 |
uterine epithelium | 8.09e-09 | 2 |
cervix epithelium | 8.09e-09 | 2 |
subdivision of digestive tract | 1.33e-07 | 118 |