FFCP PHASE1:Hg19::chr18:47808050..47808060,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:47808050..47808060,- to FFCP PHASE1:Hg19::chr18:47808050..47808060,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4152 | |EntrezGene=4152 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6916 | |HGNC=6916 | ||
|TSSclassifier=strong | |||
|UniProt=B4DUR3,Q9UIS9 | |UniProt=B4DUR3,Q9UIS9 | ||
|association_with_transcript=76bp_to_NM_001204143,uc010xdj.1_5end | |||
|cluster_id=chr18:47808050..47808060,- | |||
|description=CAGE_peak_4_at_MBD1_5end | |||
|id=chr18:47808050..47808060,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000946;8.55e-14;1!CL:0000222;8.55e-14;1!CL:0002252;8.55e-14;1!CL:0000786;8.55e-14;1!CL:0002262;1.54e-07;2!CL:1000398;1.54e-07;2!CL:0002363;1.54e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002252,3.98e-14,1;CL:0000946,6.65e-14,1;CL:0000786,6.65e-14,1;CL:0000980,6.65e-14,1;CL:0002262,1.28e-07,2;CL:1000398,1.28e-07,2;CL:0000785,1.36e-07,2;CL:0000955,1.36e-07,2;CL:0000818,1.36e-07,2;CL:0000954,1.36e-07,2;CL:0000816,1.36e-07,2;CL:0002363,2.25e-07,2;CL:0000008,2.25e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000954;1.54e-07;2!CL:0000008;1.54e-07;2 | |||
|ontology_enrichment_disease=DOID:2531!9.48e-07!51;DOID:0060083!9.48e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.54e-07;2!UBERON:0001281;1.54e-07;2!UBERON:0003497;1.54e-07;2!UBERON:0003909;1.54e-07;2!UBERON:0003566;1.54e-07;2!UBERON:0003835;1.54e-07;2!UBERON:0001777;1.54e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,1.28e-07,2;UBERON:0003497,1.28e-07,2;UBERON:0003909,1.28e-07,2;UBERON:0003835,1.28e-07,2;UBERON:0000007,1.75e-07,2;UBERON:0003566,2.25e-07,2;UBERON:0001777,2.25e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0.229240217243854,0.57470412614962,0.629686250509434,0,0,0.154816123316076,0,1.50602959389125,0.739508020333575,0.309868802321207,0.568676929949686,0,0,0.200544447470142,0,0,0.32389366601898,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0.689491361473237,0,0,0.188242339542605,0,0,1.22433556948361,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0,0.316462387440884,0,0.212604299965044,0,0,0.150176892841506,0.32145117339416,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0,1.94826728407911,0,0.294605907474837,0,0.270803863765016,0.128091319725675,0.260118695119756,0,0.276350017785848,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0,0,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0.56530794192401,0,1.10047216776027,0.208994966536811,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0.549605231791222,0,0,1.74437620857014,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0.312160076830321,0,0,0,0.323745888736263,0,0.204154171254893,0.368502951935304,0.206651562351531,0,0,0,0,0,0,0,0,0.30648779579902,0,0.453728732640084,0.538168907066586,0,0,0,0.103052529238439,0.515281080091258,0,0.337552664482532,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0.272746120590835,0.573609190778008,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0.482022059766964,0.110293972732394,0.217879444092406,0.237270619111097,0.404493924480493,0.196221465125346,0.769494313892781,0.738155454624648,1.40241773803446,0.8231480226628,0,0,0,0,0.882926198829301,0,0,0.439001141634502,0,0.703702806881416,0.462942225792648,0.325808305310325,1.03993478527958,0,0,0.117408694235822,0.144366447761074,0,0.380508304469197,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0.447792613514241,0.581267877027924,0.383382679165211,0,0.352193736052904,0,0,0.25248486685276,0,0,0,0,0.205654985406647,0,0,0.112131084345361,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0.532844358032199,0.285955987316295,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0.560425719967636,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.178428988797162,0,0.117141414992713,0.300946099727719,0,0,0,0.368738337083406,0,0,0,0.413536052245775,0.215714200818617,0.106727557803444,0.606255142892519,0,0.604780586659361,0,0.153461973288062,0,0,0,0.160853921143607,0,0.154209693802656,0,0,0,0.116210378459959,0.120859449591622,0.200506470303285,0.460404944679482,0.229628896329213,0,0,0,0.15403067420883,0,0,0.422206515571503,1.13733384070897,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0.438519753291869,0,0,0,0,0.309123034943167,0.0915694648183434,0.165018999841176,0,0,0,0.096670718292122,0.154048617114644,0,0.275673144969061,0.107420244868274,0.145016693914229,0.340906509664404,0.0890320356467374,0.495854746082934,0.768760269460425,0.255225424989168,0.4046311234222,0,0.31481234683064,0,0,0,0,0,0,0,0,0.571890581771475,0.255897791311334,0.42793898803392,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0,0,0,0.379473173765715,0,0.384888450902048,0,0,0.188287601553558,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.557409525377156,0.28853842595289,0.142283686696828,0.318852545457645,0.399158742865633,0,0,0.324621940274555,0,0.228234679033192,0,0,0,0,0.201799707191048,0.425846237690326,0.687010689511529,0.307240764308458,0.223676107892416,0.333698283423817,0,0.278406173895242,1.23087398947712,0,0.99921590399346,1.4098700508785,0,0.293016358543788,0.121360521749513,2.34031106982705,0,0,0,0,0.994147647766298,0.281338832821026,0.222617410045812,0,0.844501632511974,0.398495976502139,0,0.251932747854276,0.20453736500431,0.984678443688556,0.311039587661807,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0.724999575434793,0,0,0,0.689486746482929,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0,0,0.139423744278603,0.153900517007594,0.227884111694002,0,0,0.108647371922008,0.638002319463839,0.0915975934018623,1.06606955203727,1.02193298195737,0.31396051279005,0,0,0,0.167821586975843,0,0.158936578980379,0.210998064528027,0.326465616318295,0.141353071433941,0.432777279484182,0,0,0.611030144933625,0,0,0.104421949505455,0.067401132980677,0,0,0.182454789215666,0,0,0.394584402849391,0,0,0.189559738885464,0.60129367765797,0,0,0,0,0,0,0,0.173559738335131,0.587954384486266,0.174118413160805,0,0,0.19351266257817,0.219267951258557,0,0.0969890164884194,0.176512253383001,0.225980740780532,0.411125773940253,0,0.0633107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| ||
|short_description=p4@MBD1 | |||
}} | }} |
Latest revision as of 18:17, 19 September 2015
Short description: | p4@MBD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MBD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 76bp_to_NM_001204143, uc010xdj.1_5end |
EntrezGene: | MBD1 |
HGNC: | 6916 |
UniProt: | B4DUR3Q9UIS9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of esophagus | 3.98e-14 | 1 |
antibody secreting cell | 6.65e-14 | 1 |
plasma cell | 6.65e-14 | 1 |
plasmablast | 6.65e-14 | 1 |
endothelial cell of sinusoid | 1.28e-07 | 2 |
endothelial cell of hepatic sinusoid | 1.28e-07 | 2 |
mature B cell | 1.36e-07 | 2 |
pre-B-II cell | 1.36e-07 | 2 |
transitional stage B cell | 1.36e-07 | 2 |
small pre-B-II cell | 1.36e-07 | 2 |
immature B cell | 1.36e-07 | 2 |
keratocyte | 2.25e-07 | 2 |
migratory cranial neural crest cell | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 1.28e-07 | 2 |
abdomen blood vessel | 1.28e-07 | 2 |
sinusoid | 1.28e-07 | 2 |
abdominal segment blood vessel | 1.28e-07 | 2 |
pituitary gland | 1.75e-07 | 2 |
head connective tissue | 2.25e-07 | 2 |
substantia propria of cornea | 2.25e-07 | 2 |