FFCP PHASE1:Hg19::chr7:8301757..8301766,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3382 | |EntrezGene=3382 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5343 | |HGNC=5343 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_ENST00000486677_5end | |association_with_transcript=8bp_to_ENST00000486677_5end | ||
|cluster_id=chr7:8301757..8301766,- | |||
|description=CAGE_peak_5_at_ICA1_5end | |description=CAGE_peak_5_at_ICA1_5end | ||
|id=chr7:8301757..8301766,- | |id=chr7:8301757..8301766,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000167;2.25e-19;1!CL:0000164;2.25e-19;1!CL:0000502;2.25e-19;1!CL:0000172;2.25e-19;1!CL:0000173;2.25e-19;1!CL:0000239;2.47e-07;3!CL:1000615;2.47e-07;3!CL:0002306;2.47e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.88e-19,1;CL:0000164,1.88e-19,1;CL:0000502,1.88e-19,1;CL:0000172,1.88e-19,1;CL:0000173,1.88e-19,1;CL:0002351,1.88e-19,1;CL:0000239,1.82e-07,3;CL:1000615,1.82e-07,3;CL:0002306,1.82e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002351;2.25e-19;1!UBERON:0010227;2.25e-19;1!UBERON:0006215;2.47e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;2.25e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.88e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.79e-19!115;UBERON:0001049!9.81e-13!57;UBERON:0005068!9.81e-13!57;UBERON:0006241!9.81e-13!57;UBERON:0007135!9.81e-13!57;UBERON:0002616!5.67e-12!59;UBERON:0004111!6.20e-12!241;UBERON:0003075!8.06e-12!86;UBERON:0007284!8.06e-12!86;UBERON:0000955!1.25e-11!69;UBERON:0006238!1.25e-11!69;UBERON:0002780!6.13e-11!41;UBERON:0001890!6.13e-11!41;UBERON:0006240!6.13e-11!41;UBERON:0000025!7.82e-11!194;UBERON:0002346!9.19e-11!90;UBERON:0001893!1.34e-10!34;UBERON:0003080!1.66e-10!42;UBERON:0000477!3.72e-10!286;UBERON:0002791!9.51e-10!33;UBERON:0001017!1.12e-09!82;UBERON:0000073!1.33e-09!94;UBERON:0001016!1.33e-09!94;UBERON:0001869!1.50e-09!32;UBERON:0005743!2.65e-09!86;UBERON:0002020!2.76e-09!34;UBERON:0003528!2.76e-09!34;UBERON:0000483!4.26e-09!309;UBERON:0000119!8.72e-09!312;UBERON:0003056!8.78e-09!61;UBERON:0002619!1.99e-08!22;UBERON:0001950!2.60e-08!20;UBERON:0000464!5.85e-08!104;UBERON:0000480!1.04e-07!626;UBERON:0000062!1.19e-07!511;UBERON:0000153!1.94e-07!129;UBERON:0007811!1.94e-07!129;UBERON:0000467!2.32e-07!625;UBERON:0000064!3.71e-07!219;UBERON:0000956!5.74e-07!25;UBERON:0000203!5.74e-07!25;UBERON:0000033!6.21e-07!123 | |ontology_enrichment_uberon=UBERON:0007023!6.79e-19!115;UBERON:0001049!9.81e-13!57;UBERON:0005068!9.81e-13!57;UBERON:0006241!9.81e-13!57;UBERON:0007135!9.81e-13!57;UBERON:0002616!5.67e-12!59;UBERON:0004111!6.20e-12!241;UBERON:0003075!8.06e-12!86;UBERON:0007284!8.06e-12!86;UBERON:0000955!1.25e-11!69;UBERON:0006238!1.25e-11!69;UBERON:0002780!6.13e-11!41;UBERON:0001890!6.13e-11!41;UBERON:0006240!6.13e-11!41;UBERON:0000025!7.82e-11!194;UBERON:0002346!9.19e-11!90;UBERON:0001893!1.34e-10!34;UBERON:0003080!1.66e-10!42;UBERON:0000477!3.72e-10!286;UBERON:0002791!9.51e-10!33;UBERON:0001017!1.12e-09!82;UBERON:0000073!1.33e-09!94;UBERON:0001016!1.33e-09!94;UBERON:0001869!1.50e-09!32;UBERON:0005743!2.65e-09!86;UBERON:0002020!2.76e-09!34;UBERON:0003528!2.76e-09!34;UBERON:0000483!4.26e-09!309;UBERON:0000119!8.72e-09!312;UBERON:0003056!8.78e-09!61;UBERON:0002619!1.99e-08!22;UBERON:0001950!2.60e-08!20;UBERON:0000464!5.85e-08!104;UBERON:0000480!1.04e-07!626;UBERON:0000062!1.19e-07!511;UBERON:0000153!1.94e-07!129;UBERON:0007811!1.94e-07!129;UBERON:0000467!2.32e-07!625;UBERON:0000064!3.71e-07!219;UBERON:0000956!5.74e-07!25;UBERON:0000203!5.74e-07!25;UBERON:0000033!6.21e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0002581;2.25e-19;1!UBERON:0002902;2.25e-19;1!UBERON:0002079;2.25e-19;1!UBERON:0009899;2.25e-19;1!UBERON:0001872;2.02e-15;5!UBERON:0002081;2.27e-10;2!UBERON:0001950;2.27e-08;20!UBERON:0002619;1.08e-07;22!UBERON:0004151;2.47e-07;3!UBERON:0006853;2.47e-07;3!UBERON:0007685;2.47e-07;3!UBERON:0004134;2.47e-07;3!UBERON:0000956;7.26e-07;25!UBERON:0000203;7.26e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,1.08e-19,1;UBERON:0002581,2.71e-19,1;UBERON:0002902,4.69e-19,1;UBERON:0009899,4.69e-19,1;UBERON:0001872,3.12e-15,5;UBERON:0002081,1.57e-10,2;UBERON:0010227,1.57e-10,2;UBERON:0001950,2.92e-08,20;UBERON:0002619,1.36e-07,22;UBERON:0006853,1.82e-07,3;UBERON:0007685,1.82e-07,3;UBERON:0004134,1.82e-07,3;UBERON:0004151,1.93e-07,3;UBERON:0000956,8.89e-07,25;UBERON:0000203,8.89e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.327447688744282,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0.860234595106124,0,0,0.838998872419812,1.37559020970034,0,0.516833518338658,0,0.33472061276467,0.402829317109147,0,0,0.735326160691737,0,0.17859945656816,0.44905874525234,0.450445921933289,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0,0.380508304469197,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0.621984346622316,0.144119953416961,0,0,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0.0920809889358963,0,0,0,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0.509752546090077,1.66215201785745,0.223874754722178,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0.614481528616916,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0.562677665642051,0,0,0,0,0,0.251932747854276,0,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0.361789315876224,0,0.442317039724898,1.18219047581419,0.658156191461918,0.10893846351899,0,0.230850775511391,0,0,0,0.434589487688032,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0.167821586975843,0,0.317873157960757,0,0,0.141353071433941,0,0,0.442287822516696,0,0,0,0,0.134802265961354,0.802577647298789,0.937057782901357,0,0,0.242780379534093,0.789168805698781,0,0,0.189559738885464,0,0,0,0,0.627865836814451,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.886351143382302,0.195551382734803,0.400794101257669,0,0.39961921916426,0.144090417154106,0,0,0,0.49701014226173,0,0.407712618220842,0.104602846312333,0,0,0,0.273810757783986,0,0.429765441419957,0,0.558564802544508,0.916641696046735,0,0.399358000997982,0.858452096273142,1.11585728720936,0.403100834920358,0,1.16495949527454,0,0,0,0.0984274815147488,0,0,0.272406812223151,0,0,0,0,0,0.546746009922222,0,0,0,0.105600336519406,0.179287339332845,0.383830394638891,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0.342173675768659,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0.395223263795889,0,0,0,0,0,0,0.157054096250234,0,0.244052529803926,0.751145584238999,0,0.110929051536852,0.434674820589684,0.138348634936231,0,0,0,0,0.468334905806882,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0.537266523244462,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0.383683113910955,0.646948868380091,0,0.873677105536111,0,0,0,0,0,0,0,0,0,0.899209151350433,0,0.798169295285756,0.615349092722265,0,1.03735878696327,0.807378228159255,0,0,0,0,0,0,0.690359926060101,0,0,0,0.781514011233092,0,0.327543835020193,0.591424344868181,0.810451015420736,0.781078098613847,1.03343398250592,0.634158101939068,0,0.548257766857182,0,0,0.383287282918786,0,0,0,0.455324382702595,0,0,0,0.951576261675644,1.11813715056843,0,0,0.156986185701028,0.157115589916002,0.560544326627578,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0.098150233615243,0.365753774946808,0,0,0,0.485710993059139,0.233939463462106,0.397901550322736,0,0.11294608203896,0,0,0,0,0.940634592723046,0,1.17838273550813,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0.320965466756673,0.730336388246517,0,0.143339583151451,0,0.679914901909147,0.436350690340377,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0.250707539292375,0.151557396436479,0.535928260312357,0,0.20686599172379,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0.134704106029175,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.327447688744282,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0.860234595106124,0,0,0.838998872419812,1.37559020970034,0,0.516833518338658,0,0.33472061276467,0.402829317109147,0,0,0.735326160691737,0,0.17859945656816,0.44905874525234,0.450445921933289,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0,0.380508304469197,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0.621984346622316,0.144119953416961,0,0,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0.0920809889358963,0,0,0,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0.509752546090077,1.66215201785745,0.223874754722178,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0.614481528616916,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0.562677665642051,0,0,0,0,0,0.251932747854276,0,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0.361789315876224,0,0.442317039724898,1.18219047581419,0.658156191461918,0.10893846351899,0,0.230850775511391,0,0,0,0.434589487688032,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0.167821586975843,0,0.317873157960757,0,0,0.141353071433941,0,0,0.442287822516696,0,0,0,0,0.134802265961354,0.802577647298789,0.937057782901357,0,0,0.242780379534093,0.789168805698781,0,0,0.189559738885464,0,0,0,0,0.627865836814451,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.886351143382302,0.195551382734803,0.400794101257669,0,0.39961921916426,0.144090417154106,0,0,0,0.49701014226173,0,0.407712618220842,0.104602846312333,0,0,0,0.273810757783986,0,0.429765441419957,0,0.558564802544508,0.916641696046735,0,0.399358000997982,0.858452096273142,1.11585728720936,0.403100834920358,0,1.16495949527454,0,0,0,0.0984274815147488,0,0,0.272406812223151,0,0,0,0,0,0.546746009922222,0,0,0,0.105600336519406,0.179287339332845,0.383830394638891,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0.342173675768659,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0.395223263795889,0,0,0,0,0,0,0.157054096250234,0,0.244052529803926,0.751145584238999,0,0.110929051536852,0.434674820589684,0.138348634936231,0,0,0,0,0.468334905806882,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0.537266523244462,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0.383683113910955,0.646948868380091,0,0.873677105536111,0,0,0,0,0,0,0,0,0,0.899209151350433,0,0.798169295285756,0.615349092722265,0,1.03735878696327,0.807378228159255,0,0,0,0,0,0,0.690359926060101,0,0,0,0.781514011233092,0,0.327543835020193,0.591424344868181,0.810451015420736,0.781078098613847,1.03343398250592,0.634158101939068,0,0.548257766857182,0,0,0.383287282918786,0,0,0,0.455324382702595,0,0,0,0.951576261675644,1.11813715056843,0,0,0.156986185701028,0.157115589916002,0.560544326627578,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0.098150233615243,0.365753774946808,0,0,0,0.485710993059139,0.233939463462106,0.397901550322736,0,0.11294608203896,0,0,0,0,0.940634592723046,0,1.17838273550813,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0.320965466756673,0.730336388246517,0,0.143339583151451,0,0.679914901909147,0.436350690340377,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0.250707539292375,0.151557396436479,0.535928260312357,0,0.20686599172379,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0.134704106029175,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p5@ICA1 | |short_description=p5@ICA1 | ||
}} | }} |
Latest revision as of 19:14, 19 September 2015
Short description: | p5@ICA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ICA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000486677_5end |
EntrezGene: | ICA1 |
HGNC: | 5343 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.88e-19 | 1 |
enteroendocrine cell | 1.88e-19 | 1 |
type D enteroendocrine cell | 1.88e-19 | 1 |
somatostatin secreting cell | 1.88e-19 | 1 |
pancreatic D cell | 1.88e-19 | 1 |
progenitor cell of endocrine pancreas | 1.88e-19 | 1 |
brush border epithelial cell | 1.82e-07 | 3 |
kidney cortex tubule cell | 1.82e-07 | 3 |
epithelial cell of proximal tubule | 1.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 1.08e-19 | 1 |
postcentral gyrus | 2.71e-19 | 1 |
occipital pole | 4.69e-19 | 1 |
pole of cerebral hemisphere | 4.69e-19 | 1 |
parietal lobe | 3.12e-15 | 5 |
cardiac atrium | 1.57e-10 | 2 |
future cardiac atrium | 1.57e-10 | 2 |
neocortex | 2.92e-08 | 20 |
regional part of cerebral cortex | 1.36e-07 | 22 |
renal cortex tubule | 1.82e-07 | 3 |
region of nephron tubule | 1.82e-07 | 3 |
proximal tubule | 1.82e-07 | 3 |
cardiac chamber | 1.93e-07 | 3 |
cerebral cortex | 8.89e-07 | 25 |
pallium | 8.89e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.88e-19 | 1 |