FFCP PHASE1:Hg19::chr1:91967061..91967084,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8317 | |EntrezGene=8317 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1745 | |HGNC=1745 | ||
|TSSclassifier=strong | |||
|UniProt=O00311 | |UniProt=O00311 | ||
|association_with_transcript=-189bp_to_AB590547,AF005209_5end | |association_with_transcript=-189bp_to_AB590547,AF005209_5end | ||
|cluster_id=chr1:91967061..91967084,+ | |||
|description=CAGE_peak_4_at_CDC7_5end | |description=CAGE_peak_4_at_CDC7_5end | ||
|id=chr1:91967061..91967084,+ | |id=chr1:91967061..91967084,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.69e-17!235;DOID:14566!2.26e-16!239;DOID:305!1.59e-13!106;DOID:0050687!4.85e-13!143 | |ontology_enrichment_disease=DOID:162!5.69e-17!235;DOID:14566!2.26e-16!239;DOID:305!1.59e-13!106;DOID:0050687!4.85e-13!143 | ||
|ontology_enrichment_disease_v019=DOID:225;3.28e-11;1!DOID:4362;5.49e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:225,6.00e-11,1;DOID:4362,5.49e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.74e-12!94;UBERON:0001016!1.74e-12!94;UBERON:0001017!6.80e-12!82;UBERON:0001869!1.34e-11!32;UBERON:0005743!2.26e-11!86;UBERON:0001893!3.14e-11!34;UBERON:0002780!6.85e-11!41;UBERON:0001890!6.85e-11!41;UBERON:0006240!6.85e-11!41;UBERON:0002791!1.17e-10!33;UBERON:0002020!1.19e-10!34;UBERON:0003528!1.19e-10!34;UBERON:0000955!2.01e-10!69;UBERON:0006238!2.01e-10!69;UBERON:0003080!2.03e-10!42;UBERON:0000956!3.67e-10!25;UBERON:0000203!3.67e-10!25;UBERON:0002619!8.38e-10!22;UBERON:0001049!1.11e-09!57;UBERON:0005068!1.11e-09!57;UBERON:0006241!1.11e-09!57;UBERON:0007135!1.11e-09!57;UBERON:0001950!1.27e-09!20;UBERON:0002616!4.11e-08!59;UBERON:0003056!1.55e-07!61;UBERON:0003075!2.69e-07!86;UBERON:0007284!2.69e-07!86 | |ontology_enrichment_uberon=UBERON:0000073!1.74e-12!94;UBERON:0001016!1.74e-12!94;UBERON:0001017!6.80e-12!82;UBERON:0001869!1.34e-11!32;UBERON:0005743!2.26e-11!86;UBERON:0001893!3.14e-11!34;UBERON:0002780!6.85e-11!41;UBERON:0001890!6.85e-11!41;UBERON:0006240!6.85e-11!41;UBERON:0002791!1.17e-10!33;UBERON:0002020!1.19e-10!34;UBERON:0003528!1.19e-10!34;UBERON:0000955!2.01e-10!69;UBERON:0006238!2.01e-10!69;UBERON:0003080!2.03e-10!42;UBERON:0000956!3.67e-10!25;UBERON:0000203!3.67e-10!25;UBERON:0002619!8.38e-10!22;UBERON:0001049!1.11e-09!57;UBERON:0005068!1.11e-09!57;UBERON:0006241!1.11e-09!57;UBERON:0007135!1.11e-09!57;UBERON:0001950!1.27e-09!20;UBERON:0002616!4.11e-08!59;UBERON:0003056!1.55e-07!61;UBERON:0003075!2.69e-07!86;UBERON:0007284!2.69e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.74e-11;22!UBERON:0000956;1.59e-09;25!UBERON:0000203;1.59e-09;25!UBERON:0001950;8.40e-08;20!UBERON:0001869;1.08e-07;32!UBERON:0000002;1.25e-07;6!UBERON:0001560;1.25e-07;6!UBERON:0000200;1.68e-07;6!UBERON:0003528;3.72e-07;34!UBERON:0002020;3.72e-07;34!UBERON:0001893;3.76e-07;34!UBERON:0002791;3.80e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,8.21e-11,22;UBERON:0000956,1.50e-09,25;UBERON:0000203,1.50e-09,25;UBERON:0002780,3.50e-08,41;UBERON:0001890,3.50e-08,41;UBERON:0003080,3.50e-08,41;UBERON:0006240,3.50e-08,41;UBERON:0001950,7.96e-08,20;UBERON:0001016,1.22e-07,89;UBERON:0000002,1.25e-07,6;UBERON:0001560,1.25e-07,6;UBERON:0000200,1.47e-07,6;UBERON:0002791,1.72e-07,32;UBERON:0001869,1.72e-07,32;UBERON:0003528,4.70e-07,34;UBERON:0002020,4.70e-07,34;UBERON:0001893,4.70e-07,34;UBERON:0001017,9.04e-07,81 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.251085279189606,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0.805658634218294,0,0,0,0,0.625098097988558,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0.206105058476878,0,0,0.337552664482532,0,0,0,0,0,0,0.339121184620975,0,0,0,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.330881918197182,0.435758888184812,0.237270619111097,0.269662616320329,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380987365753014,0,0,0,0.411309970813294,0.901029173531752,0,0.224262168690721,0,0.51336800074665,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0.229628896329213,0.546273504020151,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0.522870902049801,0.256450125116389,0,0,0,2.28923662045859,4.29049399587058,0.574265537996172,0,0,0,0,0.767518373630648,0.551346289938122,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699869440489966,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.577076851905779,0,0,0,0,0.211673582723883,0.324621940274555,0.561594356226918,0.228234679033192,0.313359791546046,0,0.677167111206413,0.1605880751037,0.201799707191048,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0.270455678475983,0.33307196799782,0,0,0,0.121360521749513,0.111443384277478,0.568272293612826,0,0,0,0,0.140669416410513,0.111308705022906,0.494411622680279,0.844501632511974,0,0,0.251932747854276,0.20453736500431,0,0,0.0898683511473268,1.61119057208048,0,0,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0.762760950878299,1.18193840883968,0,0.583209226766509,0,0,0.361789315876224,0,0,0,0.219385397153973,0.32681539055697,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0.476809736941136,0.421996129056054,0.326465616318295,0.141353071433941,0.865554558968364,0,0,0,0,0,0.730953646538188,0.067401132980677,0,0,0,0,0.728341138602278,0,0,0.30607276163049,0,6.76455387365216,0.622129148383483,0,0,0,0,0,0,0,0.0979923974143777,1.21882889212564,0,0,0.0967563312890851,0.877071805034227,0.739039113478883,0,0,0,0.685209623233754,0,0.633107959558787,0.586654148204409,0,0,0,0,0.458146384663663,0,0.432164393964449,0.124252535565433,0,0,0.104602846312333,0.203996435272644,0,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0,0,0.199679000498991,0,0,0.604651252380536,0,0,0.0787831823072236,0.494495150286999,0.202210631562555,0.196854963029498,0.423366660328922,2.38568906942791,0,0.321506296930038,0.412618309791701,1.66176135211674,0,0,0.182248669974074,0,0,0.157363764404994,0,0.537862017998534,0.383830394638891,0,0,0.25426853765475,0,0,0,0,0.574647645245373,0,0.339936274560377,0,0,0.904980694530854,0,0.171086837884329,0,0,0.78602152549833,0,0.496166021811951,0.197611631897944,0,0.638341257770182,0,0,0,0,0,1.77213635993397,1.22026264901963,0.1251909307065,0.573409195690071,0.110929051536852,0.124192805882767,0.138348634936231,0.624902039810533,0,0.570930667089935,0,0,0.434763085832475,0.298509605773748,0,0,0.189403005275089,0,0,0,0,0,0.147855149989634,0,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0.489473409012935,0.358177682162975,0,0,0.530067437837643,0.38582807654183,0,0.256241518587947,0.690860683462397,0,0.138258436151731,0,0,0,0,0.245772908753719,0.422624246717254,0.39997479170986,1.06691729694141,0,0,0.552317850755522,0,0,0.895260599125562,0.862598491173454,0.157265941855896,2.40261204022431,0,0,0,0,0,0,0,0,0.3062454773532,0.256916900385838,1.41696576325585,0.319267718114302,0.205116364240755,0.252071696221718,0,0,0,0.392590874004102,0.11796972334774,0,0.115525666150338,0.381382095467167,0,0,0.225630985047772,0.20170506870352,0,0,0.327543835020193,0,0.337687923091973,2.34323429584154,0.620060389503552,0.317079050969534,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0,0.177404740325278,0.230467975111559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| ||
|short_description=p4@CDC7 | |short_description=p4@CDC7 | ||
}} | }} |
Latest revision as of 19:28, 19 September 2015
Short description: | p4@CDC7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDC7_5end |
Coexpression cluster: | NA |
Association with transcript: | -189bp_to_AB590547, AF005209_5end |
EntrezGene: | CDC7 |
HGNC: | 1745 |
UniProt: | O00311 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 8.21e-11 | 22 |
cerebral cortex | 1.50e-09 | 25 |
pallium | 1.50e-09 | 25 |
regional part of forebrain | 3.50e-08 | 41 |
forebrain | 3.50e-08 | 41 |
anterior neural tube | 3.50e-08 | 41 |
future forebrain | 3.50e-08 | 41 |
neocortex | 7.96e-08 | 20 |
nervous system | 1.22e-07 | 89 |
uterine cervix | 1.25e-07 | 6 |
neck of organ | 1.25e-07 | 6 |
gyrus | 1.47e-07 | 6 |
regional part of telencephalon | 1.72e-07 | 32 |
cerebral hemisphere | 1.72e-07 | 32 |
brain grey matter | 4.70e-07 | 34 |
gray matter | 4.70e-07 | 34 |
telencephalon | 4.70e-07 | 34 |
central nervous system | 9.04e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
syndrome | 6.00e-11 | 1 |
cervical cancer | 5.49e-09 | 5 |