FFCP PHASE1:Hg19::chr5:114607144..114607156,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=153733 | |EntrezGene=153733 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28599 | |HGNC=28599 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=150bp_to_ENST00000502975_5end | |association_with_transcript=150bp_to_ENST00000502975_5end | ||
|cluster_id=chr5:114607144..114607156,- | |||
|coexpression_cluster_id=C282 | |coexpression_cluster_id=C282 | ||
|description=CAGE_peak_9_at_CCDC112_5end | |description=CAGE_peak_9_at_CCDC112_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000236!6.42e-08!14;CL:0000784!3.22e-07!3;CL:0000817!7.15e-07!3 | |ontology_enrichment_celltype=CL:0000236!6.42e-08!14;CL:0000784!3.22e-07!3;CL:0000817!7.15e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000785;3.99e-50;1!CL:0000819;3.99e-50;1!CL:0000784;1.12e-17;3!CL:0000945;2.56e-09;24!CL:0000542;1.30e-08;53 | |ontology_enrichment_celltype_v019=CL:0000785;3.99e-50;1!CL:0000819;3.99e-50;1!CL:0000784;1.12e-17;3!CL:0000945;2.56e-09;24!CL:0000542;1.30e-08;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000819,3.99e-50,1;CL:0000785,7.14e-26,2;CL:0000955,7.14e-26,2;CL:0000818,7.14e-26,2;CL:0000954,7.14e-26,2;CL:0000816,7.14e-26,2;CL:0000817,9.46e-18,3;CL:0000784,1.12e-17,3;CL:0000542,2.52e-09,53;CL:0000051,2.52e-09,53;CL:0000945,2.56e-09,24;CL:0000826,2.56e-09,24 | |||
|ontology_enrichment_development_v019=CL:0000954;7.14e-26;2!CL:0000051;1.30e-08;53 | |ontology_enrichment_development_v019=CL:0000954;7.14e-26;2!CL:0000051;1.30e-08;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:12603;1.46e-50;1!DOID:0060073;3.99e-50;1!DOID:8675;3.99e-50;1!DOID:0060058;8.54e-21;10!DOID:2531;5.10e-07;51!DOID:0060083;5.10e-07;51 | |ontology_enrichment_disease_v019=DOID:12603;1.46e-50;1!DOID:0060073;3.99e-50;1!DOID:8675;3.99e-50;1!DOID:0060058;8.54e-21;10!DOID:2531;5.10e-07;51!DOID:0060083;5.10e-07;51 | ||
|ontology_enrichment_disease_v019_2=DOID:12603,1.46e-50,1;DOID:0060073,3.99e-50,1;DOID:8675,3.99e-50,1;DOID:0060058,8.54e-21,10;DOID:2531,1.17e-09,51;DOID:0060083,1.17e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002021!2.55e-08!5;UBERON:0006331!6.18e-07!3 | |ontology_enrichment_uberon=UBERON:0002021!2.55e-08!5;UBERON:0006331!6.18e-07!3 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p9@CCDC112 | |short_description=p9@CCDC112 | ||
}} | }} |
Latest revision as of 19:32, 19 September 2015
Short description: | p9@CCDC112 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CCDC112_5end |
Coexpression cluster: | C282_acute_B_tonsil_CD19_submaxillary_lymph_throat |
Association with transcript: | 150bp_to_ENST00000502975_5end |
EntrezGene: | CCDC112 |
HGNC: | 28599 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 3.99e-50 | 1 |
mature B cell | 7.14e-26 | 2 |
pre-B-II cell | 7.14e-26 | 2 |
transitional stage B cell | 7.14e-26 | 2 |
small pre-B-II cell | 7.14e-26 | 2 |
immature B cell | 7.14e-26 | 2 |
precursor B cell | 9.46e-18 | 3 |
plasmacytoid dendritic cell | 1.12e-17 | 3 |
lymphocyte | 2.52e-09 | 53 |
common lymphoid progenitor | 2.52e-09 | 53 |
lymphocyte of B lineage | 2.56e-09 | 24 |
pro-B cell | 2.56e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.46e-50 | 1 |
lymphatic system cancer | 3.99e-50 | 1 |
lymphosarcoma | 3.99e-50 | 1 |
lymphoma | 8.54e-21 | 10 |
hematologic cancer | 1.17e-09 | 51 |
immune system cancer | 1.17e-09 | 51 |