FFCP PHASE2:Hg19::chr1:201979892..201979925,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:1999 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:3318 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=1999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=3318 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P78545 | ||
|association_with_transcript=177bp_to_ENST00000367283_5end | |association_with_transcript=177bp_to_ENST00000367283_5end | ||
|cluster_id=chr1:201979892..201979925,+ | |cluster_id=chr1:201979892..201979925,+ | ||
Latest revision as of 19:46, 19 September 2015
| Short description: | p3@ELF3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_ELF3_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 177bp_to_ENST00000367283_5end |
| EntrezGene: | ELF3 |
| HGNC: | 3318 |
| UniProt: | P78545 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@ELF3 |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
4.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| bladder cell | 2.63e-12 | 1 |
| lower urinary tract cell | 2.63e-12 | 1 |
| epithelial cell | 5.02e-11 | 253 |
| epithelial cell of gall bladder | 9.96e-07 | 2 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| urinary bladder urothelium | 2.63e-12 | 1 |
| wall of urinary bladder | 2.63e-12 | 1 |
| mucosa of urinary bladder | 2.63e-12 | 1 |
| mammalian vulva | 3.65e-12 | 1 |
| external female genitalia | 3.65e-12 | 1 |
| subdivision of digestive tract | 2.14e-07 | 118 |
| endo-epithelium | 2.90e-07 | 82 |
| digestive system | 4.30e-07 | 145 |
| digestive tract | 4.30e-07 | 145 |
| primitive gut | 4.30e-07 | 145 |
Showing 1 to 10 of 17 entries
| Ontology term | p-value | n |
|---|---|---|
| carcinoma | 1.15e-29 | 106 |
| cell type cancer | 2.16e-21 | 143 |
| squamous cell carcinoma | 2.18e-12 | 14 |
| cystadenocarcinoma | 5.05e-12 | 1 |
| mucinous cystadenocarcinoma | 5.05e-12 | 1 |
| cancer | 5.30e-12 | 235 |
| disease of cellular proliferation | 1.06e-11 | 239 |
| adenocarcinoma | 2.06e-10 | 25 |
| disease of anatomical entity | 3.13e-09 | 39 |
Showing 1 to 9 of 9 entries
