FFCP PHASE1:Hg19::chr2:208634399..208634439,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:208634399..208634439,-
|short_description=p2@FZD5
|description=CAGE_peak_2_at_FZD5_5end
|association_with_transcript=-112bp_to_ENST00000295417_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7855 | |EntrezGene=7855 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4043 | |HGNC=4043 | ||
|TSSclassifier=strong | |||
|UniProt=Q13467 | |UniProt=Q13467 | ||
|association_with_transcript=-112bp_to_ENST00000295417_5end | |||
|cluster_id=chr2:208634399..208634439,- | |||
|coexpression_cluster_id=C2683 | |||
|description=CAGE_peak_2_at_FZD5_5end | |||
|id=chr2:208634399..208634439,- | |||
|ontology_enrichment_celltype=CL:0000066!7.76e-22!254;CL:0000223!1.97e-10!59 | |||
|ontology_enrichment_celltype_v019=CL:0000039;6.52e-09;7!CL:0000586;6.52e-09;7!CL:0000182;1.34e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.76e-14,253;CL:0000223,1.21e-13,58;CL:0000039,6.47e-09,7;CL:0000586,6.47e-09,7;CL:0000182,1.47e-07,12;CL:0002076,6.76e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0001041;4.91e-12;30!UBERON:0003104;1.85e-10;31!UBERON:0009497;2.97e-09;13!UBERON:0004161;3.76e-08;11!CL:0000223;1.37e-07;58 | |||
|ontology_enrichment_disease=DOID:305!7.16e-22!106;DOID:0050687!3.66e-15!143;DOID:162!2.77e-09!235;DOID:14566!1.31e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.07e-17,106;DOID:0050687,1.20e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.28e-15!169;UBERON:0000925!1.28e-15!169;UBERON:0006595!1.28e-15!169;UBERON:0001007!8.17e-15!155;UBERON:0001555!8.17e-15!155;UBERON:0007026!8.17e-15!155;UBERON:0004921!1.01e-14!129;UBERON:0004185!1.01e-14!129;UBERON:0005911!9.58e-13!82;UBERON:0005177!2.65e-12!107;UBERON:0000077!2.18e-11!130;UBERON:0001041!2.16e-10!98;UBERON:0000466!3.97e-10!126;UBERON:0009569!1.13e-09!113;UBERON:0005172!1.22e-08!55;UBERON:0005173!1.22e-08!55;UBERON:0002417!1.47e-08!61;UBERON:0000916!1.47e-08!61;UBERON:0005409!6.09e-08!35;UBERON:0003929!2.26e-07!54;UBERON:0001048!2.35e-07!168;UBERON:0000062!5.50e-07!511;UBERON:0009856!7.27e-07!26;UBERON:0000464!8.45e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;3.91e-08;22!UBERON:0000160;2.59e-07;17!UBERON:0002423;4.22e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,5.99e-12,101;UBERON:0005911,1.42e-11,82;UBERON:0004119,2.88e-10,160;UBERON:0000925,2.88e-10,160;UBERON:0006595,2.88e-10,160;UBERON:0005172,5.30e-10,54;UBERON:0005173,5.30e-10,54;UBERON:0009856,1.69e-09,26;UBERON:0001007,1.97e-09,145;UBERON:0001555,1.97e-09,145;UBERON:0007026,1.97e-09,145;UBERON:0002417,2.36e-09,60;UBERON:0000916,2.36e-09,60;UBERON:0004921,7.90e-09,118;UBERON:0007499,9.22e-09,25;UBERON:0003929,1.04e-07,54;UBERON:0009569,1.24e-07,112;UBERON:0005409,1.28e-07,25;UBERON:0000160,1.84e-07,17;UBERON:0009854,2.52e-07,23;UBERON:0009497,3.31e-07,25;UBERON:0000015,3.31e-07,25;UBERON:0002423,3.31e-07,25;UBERON:0006235,3.31e-07,25;UBERON:0004161,3.31e-07,25 | |||
|phase1_expression=0.726713517082227,1.71280419112787,1.55049844505568,1.0007329835313,0.893922188854576,0,0,0.631719873426831,1.30592814099919,3.44027511102112,4.88460817580699,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0.408001382488506,1.88072832886853,3.43483184557268,3.69560947696787,4.01736446703369,0.382067028739756,0.164201178899891,0.236132343941038,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0.293600439334847,0,0,0,0.895661896959697,1.29557466407592,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0.605399502633369,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0.790152254325231,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,2.43806866313962,0.670700859703636,0.255725123687061,0.361439152384566,0,0.289693037921647,0,0,3.30871860074237,0,1.14185221401064,2.22664428346111,0.364295288292542,0.741568885568859,2.27183175558278,1.39303789839414,0.930705723632056,0,0,0,0.39752481473341,0,0,0.56530794192401,0.419499436209906,1.6507082516404,0.417989933073621,0.516833518338658,0.71153252537342,0.33472061276467,0,0,0.976248230192678,0.367663080345869,0,0.267899184852239,0.22452937262617,0.450445921933289,0,0,0,0,0,0.872188104285069,0,0.25326102332916,0.132409180813219,0,0.354668382198357,0,0,0,0,0.269421344139376,0.326923806226917,0.302714855289863,0,0,0,0,0.149448680551801,0,0,0,0,0,0.206651562351531,0,0.247266929278557,0,0,0,0,0,0,0,0.600952235626387,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0,0.206105058476878,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0,1.93260853163297,1.09098448236334,1.43402297694502,3.90315859614705,12.3252684538981,4.76395165765025,5.70135802584537,5.2987378683882,5.47466038613745,0,0.643240938192885,0,2.78620756819187,0,0.709840800239063,0.337169380156203,0.482022059766964,0.55146986366197,0,0.237270619111097,0.269662616320329,0.784885860501384,0.38474715694639,0,0,0.8231480226628,0,17.7457048750563,11.7939266001315,5.90789906681404,0,12.6678091699407,0.171567810298526,1.64625428112938,1.1240175325762,0.301586917234893,0.462942225792648,0,0,1.44331342025273,12.056762117408,0.234817388471643,1.44366447761074,1.38895653772983,1.52203321787679,0.790204397959275,0.858486162094873,2.95460407304877,0.936017060556951,0.891786973732369,1.87467667973554,0.839910640994298,0.708875486211932,0.0895585227028483,0.581267877027924,0.766765358330422,0,0.088048434013226,0.829312462163088,0.144119953416961,0.37872730027914,0.190493682876507,0,1.17217447210047,0,0.205654985406647,0,0,0.112131084345361,0,0,0.129271715757778,3.57656445851882,0,0,0,0.514414748524284,0,0,0.285955987316295,0,0,0,0,0,0,0,0.199945982364114,0,1.00451418286425,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0.197030760201927,0.431255149719035,0,1.77866236955724,1.30139853857622,2.31986643833309,3.35032530668698,1.91381625495949,0,0,0,0.24538298343828,0,0.271265023699736,0,0.356857977594324,0.315404830067869,0.585707074963566,0.300946099727719,2.27407504055985,0,0.664225598535437,0,0.173767228936166,0,0.343143423810856,0,0,0.106727557803444,0,1.66435439510497,0,0.248107807818777,0,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0,0,0.0821271560138091,0,0.116210378459959,15.9534473460941,1.60405176242628,0.0920809889358963,0.114814448164607,0,0.262248829918848,0.902399225814824,0.924184045252977,1.56869953835371,1.46139224653261,1.16106791782163,0,0.340187410553031,0,0,1.08378575017541,2.00675909541941,2.80363900349542,2.49322802678617,1.79099803777743,0.877039506583738,2.0914836081992,0.512900250232778,0,0.650756789328606,4.94596855909067,6.68457093173907,4.7855509953941,1.14853107599234,0,0,0.193341436584244,0.154048617114644,0,0,0,0,0.0852266274161009,0.0890320356467374,2.14870389969272,2.88285101047659,0.765676274967505,1.6185244936888,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0.372158369359667,0.316379424718726,0.38126038784765,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.424216295861138,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.633322905892992,0,0,0.349934720244983,0.288666338176536,0.670302275535787,0,6.02520324971387,1.29151611801369,0,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,14.5280736733363,0,1.96032172784825,0,0.28853842595289,0.0711418433484141,0,0.399158742865633,0,0.635020748171649,0,0,0,0.156679895773023,0,0,0.481764225311099,0.605399121573143,0.425846237690326,0.343505344755765,0,0,0.166849141711909,0.390776190804081,1.9488432172667,4.92349595790849,0.270455678475983,1.99843180798692,4.22961015263549,12.5384162073507,2.78365540616599,0.36408156524854,0.111443384277478,5.11445064251544,0,0,0,0,0,0.445234820091624,0.16480387422676,0.63337622438398,0.19924798825107,4.69682656402951,2.77126022639704,0.306806047506464,0.123084805461069,0.311039587661807,1.70749867179921,2.50629644545853,0,0.591860433821602,2.3948309234694,0,0.969332746095218,0.3710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|short_description=p2@FZD5 | |||
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Latest revision as of 19:46, 19 September 2015
Short description: | p2@FZD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FZD5_5end |
Coexpression cluster: | C2683_pancreatic_colon_choriocarcinoma_hepatocellular_Hepatocyte_Prostate_liver |
Association with transcript: | -112bp_to_ENST00000295417_5end |
EntrezGene: | FZD5 |
HGNC: | 4043 |
UniProt: | Q13467 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.76e-14 | 253 |
endodermal cell | 1.21e-13 | 58 |
germ line cell | 6.47e-09 | 7 |
germ cell | 6.47e-09 | 7 |
hepatocyte | 1.47e-07 | 12 |
endo-epithelial cell | 6.76e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 5.99e-12 | 101 |
endo-epithelium | 1.42e-11 | 82 |
endoderm-derived structure | 2.88e-10 | 160 |
endoderm | 2.88e-10 | 160 |
presumptive endoderm | 2.88e-10 | 160 |
abdomen element | 5.30e-10 | 54 |
abdominal segment element | 5.30e-10 | 54 |
sac | 1.69e-09 | 26 |
digestive system | 1.97e-09 | 145 |
digestive tract | 1.97e-09 | 145 |
primitive gut | 1.97e-09 | 145 |
abdominal segment of trunk | 2.36e-09 | 60 |
abdomen | 2.36e-09 | 60 |
subdivision of digestive tract | 7.90e-09 | 118 |
epithelial sac | 9.22e-09 | 25 |
gut epithelium | 1.04e-07 | 54 |
subdivision of trunk | 1.24e-07 | 112 |
gastrointestinal system | 1.28e-07 | 25 |
intestine | 1.84e-07 | 17 |
digestive tract diverticulum | 2.52e-07 | 23 |
epithelium of foregut-midgut junction | 3.31e-07 | 25 |
anatomical boundary | 3.31e-07 | 25 |
hepatobiliary system | 3.31e-07 | 25 |
foregut-midgut junction | 3.31e-07 | 25 |
septum transversum | 3.31e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.07e-17 | 106 |
cell type cancer | 1.20e-11 | 143 |