FFCP PHASE1:Hg19::chr11:68609377..68609398,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1374 | |EntrezGene=1374 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2328 | |HGNC=2328 | ||
|TSSclassifier=strong | |||
|UniProt=P50416,B2RAQ8,Q8WZ48 | |UniProt=P50416,B2RAQ8,Q8WZ48 | ||
|association_with_transcript=0bp_to_ENST00000265641,ENST00000376618,ENST00000538308,NM_001031847,NM_001876,uc001oof.3,uc001oog.3_5end | |association_with_transcript=0bp_to_ENST00000265641,ENST00000376618,ENST00000538308,NM_001031847,NM_001876,uc001oof.3,uc001oog.3_5end | ||
|cluster_id=chr11:68609377..68609398,- | |||
|description=CAGE_peak_2_at_CPT1A_5end | |description=CAGE_peak_2_at_CPT1A_5end | ||
|id=chr11:68609377..68609398,- | |id=chr11:68609377..68609398,- | ||
|ontology_enrichment_celltype=CL:0002139!4.79e-12!24;CL:0000115!5.71e-10!35;CL:0000763!5.86e-10!112;CL:0000049!5.86e-10!112;CL:0000071!1.54e-08!18;CL:0002546!1.54e-08!18;CL:0002078!7.95e-08!44 | |ontology_enrichment_celltype=CL:0002139!4.79e-12!24;CL:0000115!5.71e-10!35;CL:0000763!5.86e-10!112;CL:0000049!5.86e-10!112;CL:0000071!1.54e-08!18;CL:0002546!1.54e-08!18;CL:0002078!7.95e-08!44 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.48e-12;24!CL:0000115;8.88e-09;36!CL:0000071;1.79e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.75e-12,24;CL:0000115,1.62e-10,36;CL:0000763,1.92e-09,108;CL:0000049,1.92e-09,108;CL:0000071,1.53e-08,18;CL:0002546,1.53e-08,18;CL:0002078,2.94e-08,45 | |||
|ontology_enrichment_development_v019=CL:0002546;1.79e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!6.80e-15!69;UBERON:0001009!5.15e-13!113;UBERON:0001981!1.21e-12!60;UBERON:0007500!1.21e-12!60;UBERON:0004537!1.21e-12!60;UBERON:0006965!1.21e-12!60;UBERON:0004872!1.80e-12!84;UBERON:0003081!3.94e-12!216;UBERON:0004535!6.04e-12!110;UBERON:0002049!8.89e-12!79;UBERON:0007798!8.89e-12!79;UBERON:0001637!1.00e-09!42;UBERON:0003509!1.00e-09!42;UBERON:0004572!1.00e-09!42;UBERON:0001986!1.54e-08!18;UBERON:0004638!1.54e-08!18;UBERON:0004852!1.54e-08!18;UBERON:0003914!3.80e-08!118;UBERON:0004573!1.28e-07!33;UBERON:0004571!1.28e-07!33;UBERON:0002405!2.93e-07!115;UBERON:0006914!7.50e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000055;1.26e-08;65!UBERON:0004638;1.79e-08;18!UBERON:0001986;1.79e-08;18!UBERON:0004852;1.79e-08;18!UBERON:0001637;3.02e-08;42!UBERON:0003509;3.02e-08;42!UBERON:0004572;3.02e-08;42!UBERON:0004573;2.68e-07;33!UBERON:0004571;2.68e-07;33!UBERON:0007500;4.19e-07;56!UBERON:0001981;4.19e-07;56!UBERON:0004537;4.19e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,3.84e-15,68;UBERON:0003081,2.14e-13,203;UBERON:0001009,4.19e-13,112;UBERON:0007500,6.94e-13,59;UBERON:0001981,6.94e-13,59;UBERON:0004537,6.94e-13,59;UBERON:0006965,6.94e-13,59;UBERON:0004872,1.13e-12,83;UBERON:0004535,4.98e-12,109;UBERON:0002049,6.75e-12,78;UBERON:0007798,6.75e-12,78;UBERON:0001637,1.02e-09,42;UBERON:0003509,1.02e-09,42;UBERON:0004572,1.02e-09,42;UBERON:0004638,1.53e-08,18;UBERON:0001986,1.53e-08,18;UBERON:0004852,1.53e-08,18;UBERON:0003914,7.41e-08,117;UBERON:0000926,1.23e-07,315;UBERON:0004120,1.23e-07,315;UBERON:0006603,1.23e-07,315;UBERON:0004573,1.30e-07,33;UBERON:0004571,1.30e-07,33;UBERON:0006914,7.47e-07,25 | |||
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| ||
|short_description=p2@CPT1A | |short_description=p2@CPT1A | ||
}} | }} |
Latest revision as of 20:38, 19 September 2015
Short description: | p2@CPT1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CPT1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000265641, ENST00000376618, ENST00000538308, NM_001031847, NM_001876, uc001oof.3, uc001oog.3_5end |
EntrezGene: | CPT1A |
HGNC: | 2328 |
UniProt: | P50416B2RAQ8Q8WZ48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.75e-12 | 24 |
endothelial cell | 1.62e-10 | 36 |
myeloid cell | 1.92e-09 | 108 |
common myeloid progenitor | 1.92e-09 | 108 |
blood vessel endothelial cell | 1.53e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.53e-08 | 18 |
meso-epithelial cell | 2.94e-08 | 45 |
Ontology term | p-value | n |
---|---|---|
vessel | 3.84e-15 | 68 |
lateral plate mesoderm | 2.14e-13 | 203 |
circulatory system | 4.19e-13 | 112 |
epithelial tube open at both ends | 6.94e-13 | 59 |
blood vessel | 6.94e-13 | 59 |
blood vasculature | 6.94e-13 | 59 |
vascular cord | 6.94e-13 | 59 |
splanchnic layer of lateral plate mesoderm | 1.13e-12 | 83 |
cardiovascular system | 4.98e-12 | 109 |
vasculature | 6.75e-12 | 78 |
vascular system | 6.75e-12 | 78 |
artery | 1.02e-09 | 42 |
arterial blood vessel | 1.02e-09 | 42 |
arterial system | 1.02e-09 | 42 |
blood vessel endothelium | 1.53e-08 | 18 |
endothelium | 1.53e-08 | 18 |
cardiovascular system endothelium | 1.53e-08 | 18 |
epithelial tube | 7.41e-08 | 117 |
mesoderm | 1.23e-07 | 315 |
mesoderm-derived structure | 1.23e-07 | 315 |
presumptive mesoderm | 1.23e-07 | 315 |
systemic artery | 1.30e-07 | 33 |
systemic arterial system | 1.30e-07 | 33 |
squamous epithelium | 7.47e-07 | 25 |