FFCP PHASE1:Hg19::chr12:6485203..6485219,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6337 | |EntrezGene=6337 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10599 | |HGNC=10599 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENST00000536411_5end | |association_with_transcript=-9bp_to_ENST00000536411_5end | ||
|cluster_id=chr12:6485203..6485219,- | |||
|description=CAGE_peak_13_at_SCNN1A_5end | |description=CAGE_peak_13_at_SCNN1A_5end | ||
|id=chr12:6485203..6485219,- | |id=chr12:6485203..6485219,- | ||
|ontology_enrichment_celltype=CL:0000066!1.29e-25!254;CL:1000507!8.93e-08!12;CL:1000494!8.93e-08!12 | |ontology_enrichment_celltype=CL:0000066!1.29e-25!254;CL:1000507!8.93e-08!12;CL:1000494!8.93e-08!12 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.43e-07;29 | |||
|ontology_enrichment_disease=DOID:305!1.21e-19!106;DOID:0050687!1.00e-15!143;DOID:162!5.26e-08!235;DOID:1749!7.27e-08!14;DOID:14566!7.49e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!1.18e-10!44;UBERON:0005177!2.39e-10!107;UBERON:0001008!2.93e-10!45;UBERON:0000077!4.83e-10!130;UBERON:0000058!1.40e-09!26;UBERON:0001048!1.75e-09!168;UBERON:0004119!3.61e-09!169;UBERON:0000925!3.61e-09!169;UBERON:0006595!3.61e-09!169;UBERON:0000489!3.92e-09!32;UBERON:0003064!4.35e-09!37;UBERON:0000481!5.67e-09!347;UBERON:0000466!5.89e-09!126;UBERON:0002113!7.48e-09!27;UBERON:0003918!7.48e-09!27;UBERON:0005095!7.48e-09!27;UBERON:0007687!7.48e-09!27;UBERON:0004876!9.98e-09!20;UBERON:0004921!1.04e-08!129;UBERON:0004185!1.04e-08!129;UBERON:0001041!1.31e-08!98;UBERON:0000464!1.36e-08!104;UBERON:0000080!1.65e-08!18;UBERON:0002120!1.65e-08!18;UBERON:0004875!1.65e-08!18;UBERON:0005721!1.65e-08!18;UBERON:0005754!1.65e-08!18;UBERON:0007297!1.65e-08!18;UBERON:0008947!1.91e-08!38;UBERON:0003258!1.91e-08!38;UBERON:0001007!2.83e-08!155;UBERON:0001555!2.83e-08!155;UBERON:0007026!2.83e-08!155;UBERON:0000065!3.14e-08!53;UBERON:0003104!5.76e-08!238;UBERON:0009142!5.76e-08!238;UBERON:0009773!8.93e-08!12;UBERON:0001231!8.93e-08!12;UBERON:0004810!8.93e-08!12;UBERON:0000063!8.94e-08!97;UBERON:0000020!1.20e-07!23;UBERON:0001737!1.28e-07!9;UBERON:0006555!1.60e-07!17;UBERON:0005103!1.60e-07!17;UBERON:0000083!1.60e-07!17;UBERON:0009201!1.60e-07!17;UBERON:0004819!1.60e-07!17;UBERON:0006553!1.60e-07!17;UBERON:0003074!1.60e-07!17;UBERON:0003060!1.60e-07!17;UBERON:0000072!2.28e-07!46;UBERON:0001032!3.55e-07!24;UBERON:0004456!3.55e-07!24;UBERON:0003887!7.94e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0002075;9.73e-08;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.22e-11,101;UBERON:0002075,1.12e-07,18;UBERON:0008947,2.47e-07,38;UBERON:0003258,2.47e-07,38;UBERON:0000065,9.71e-07,54 | |||
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| ||
|short_description=p13@SCNN1A | |short_description=p13@SCNN1A | ||
}} | }} |
Latest revision as of 20:54, 19 September 2015
Short description: | p13@SCNN1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SCNN1A_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000536411_5end |
EntrezGene: | SCNN1A |
HGNC: | 10599 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk region element | 1.22e-11 | 101 |
viscus | 1.12e-07 | 18 |
respiratory primordium | 2.47e-07 | 38 |
endoderm of foregut | 2.47e-07 | 38 |
respiratory tract | 9.71e-07 | 54 |