FFCP PHASE1:Hg19::chr1:202858369..202858390,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5877 | |EntrezGene=5877 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9797 | |HGNC=9797 | ||
|TSSclassifier=strong | |||
|UniProt=P47224 | |UniProt=P47224 | ||
|association_with_transcript=0bp_to_NM_002871_5end | |association_with_transcript=0bp_to_NM_002871_5end | ||
|cluster_id=chr1:202858369..202858390,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_6_at_RABIF_5end | |description=CAGE_peak_6_at_RABIF_5end | ||
|id=chr1:202858369..202858390,- | |id=chr1:202858369..202858390,- | ||
|ontology_enrichment_celltype=CL:0002009!6.55e-09!65;CL:0000766!9.80e-09!76;CL:0000860!9.94e-09!45;CL:0000557!1.09e-08!71;CL:0000763!1.11e-08!112;CL:0000049!1.11e-08!112;CL:0002194!2.48e-08!63;CL:0000576!2.48e-08!63;CL:0000040!2.48e-08!63;CL:0000559!2.48e-08!63;CL:0000839!6.15e-08!70 | |ontology_enrichment_celltype=CL:0002009!6.55e-09!65;CL:0000766!9.80e-09!76;CL:0000860!9.94e-09!45;CL:0000557!1.09e-08!71;CL:0000763!1.11e-08!112;CL:0000049!1.11e-08!112;CL:0002194!2.48e-08!63;CL:0000576!2.48e-08!63;CL:0000040!2.48e-08!63;CL:0000559!2.48e-08!63;CL:0000839!6.15e-08!70 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.52e-08!80;UBERON:0002193!5.57e-08!112;UBERON:0002390!6.04e-08!102;UBERON:0003061!6.04e-08!102;UBERON:0001474!9.62e-08!86;UBERON:0002405!2.63e-07!115 | |ontology_enrichment_uberon=UBERON:0002371!5.52e-08!80;UBERON:0002193!5.57e-08!112;UBERON:0002390!6.04e-08!102;UBERON:0003061!6.04e-08!102;UBERON:0001474!9.62e-08!86;UBERON:0002405!2.63e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0001052;1.57e-09;4!UBERON:0004907;7.01e-08;5!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0001052,1.44e-09,4;UBERON:0004907,6.55e-08,5;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22 | |||
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| ||
|short_description=p6@RABIF | |short_description=p6@RABIF | ||
}} | }} |
Latest revision as of 21:06, 19 September 2015
Short description: | p6@RABIF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RABIF_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_NM_002871_5end |
EntrezGene: | RABIF |
HGNC: | 9797 |
UniProt: | P47224 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
rectum | 1.44e-09 | 4 |
lower digestive tract | 6.55e-08 | 5 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |