FFCP PHASE1:Hg19::chr1:94050668..94050724,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8412 | |EntrezGene=8412 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=973 | |HGNC=973 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000539242,uc001dpx.3,uc009wdm.1_5end | |association_with_transcript=0bp_to_ENST00000539242,uc001dpx.3,uc009wdm.1_5end | ||
|cluster_id=chr1:94050668..94050724,- | |||
|description=CAGE_peak_5_at_BCAR3_5end | |description=CAGE_peak_5_at_BCAR3_5end | ||
|id=chr1:94050668..94050724,- | |id=chr1:94050668..94050724,- | ||
|ontology_enrichment_celltype=CL:0000223!2.23e-07!59 | |ontology_enrichment_celltype=CL:0000223!2.23e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006595;7.27e-08;86 | |||
|ontology_enrichment_disease=DOID:305!5.08e-15!106;DOID:0050687!7.18e-10!143;DOID:299!8.52e-08!25 | |ontology_enrichment_disease=DOID:305!5.08e-15!106;DOID:0050687!7.18e-10!143;DOID:299!8.52e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.33e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.16e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004921!2.23e-25!129;UBERON:0004185!2.23e-25!129;UBERON:0001007!7.44e-25!155;UBERON:0001555!7.44e-25!155;UBERON:0007026!7.44e-25!155;UBERON:0004119!1.10e-23!169;UBERON:0000925!1.10e-23!169;UBERON:0006595!1.10e-23!169;UBERON:0000077!3.24e-20!130;UBERON:0001041!1.06e-15!98;UBERON:0005409!6.45e-13!35;UBERON:0000160!1.34e-11!27;UBERON:0007023!3.09e-11!115;UBERON:0001048!1.59e-09!168;UBERON:0003929!5.36e-09!54;UBERON:0009497!6.19e-09!25;UBERON:0000015!6.19e-09!25;UBERON:0002423!6.19e-09!25;UBERON:0006235!6.19e-09!25;UBERON:0004161!6.19e-09!25;UBERON:0000481!1.46e-08!347;UBERON:0003104!3.92e-08!238;UBERON:0009142!3.92e-08!238;UBERON:0001737!5.84e-08!9;UBERON:0002530!1.10e-07!59;UBERON:0005911!1.19e-07!82;UBERON:0000062!2.39e-07!511;UBERON:0009854!3.21e-07!23;UBERON:0009856!3.98e-07!26;UBERON:0001557!4.60e-07!19;UBERON:0001004!5.64e-07!72;UBERON:0002294!8.63e-07!7;UBERON:0001173!8.63e-07!7;UBERON:0004912!8.63e-07!7 | |ontology_enrichment_uberon=UBERON:0004921!2.23e-25!129;UBERON:0004185!2.23e-25!129;UBERON:0001007!7.44e-25!155;UBERON:0001555!7.44e-25!155;UBERON:0007026!7.44e-25!155;UBERON:0004119!1.10e-23!169;UBERON:0000925!1.10e-23!169;UBERON:0006595!1.10e-23!169;UBERON:0000077!3.24e-20!130;UBERON:0001041!1.06e-15!98;UBERON:0005409!6.45e-13!35;UBERON:0000160!1.34e-11!27;UBERON:0007023!3.09e-11!115;UBERON:0001048!1.59e-09!168;UBERON:0003929!5.36e-09!54;UBERON:0009497!6.19e-09!25;UBERON:0000015!6.19e-09!25;UBERON:0002423!6.19e-09!25;UBERON:0006235!6.19e-09!25;UBERON:0004161!6.19e-09!25;UBERON:0000481!1.46e-08!347;UBERON:0003104!3.92e-08!238;UBERON:0009142!3.92e-08!238;UBERON:0001737!5.84e-08!9;UBERON:0002530!1.10e-07!59;UBERON:0005911!1.19e-07!82;UBERON:0000062!2.39e-07!511;UBERON:0009854!3.21e-07!23;UBERON:0009856!3.98e-07!26;UBERON:0001557!4.60e-07!19;UBERON:0001004!5.64e-07!72;UBERON:0002294!8.63e-07!7;UBERON:0001173!8.63e-07!7;UBERON:0004912!8.63e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;3.29e-20;33!UBERON:0005409;3.90e-18;22!UBERON:0000160;1.33e-13;17!UBERON:0001041;5.94e-10;14!UBERON:0001007;2.91e-08;81!UBERON:0001555;4.44e-08;54!UBERON:0000059;1.39e-07;11!UBERON:0003127;3.89e-07;2!UBERON:0000341;3.89e-07;2!UBERON:0001829;6.73e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,4.91e-18,145;UBERON:0001555,4.91e-18,145;UBERON:0007026,4.91e-18,145;UBERON:0004921,9.06e-18,118;UBERON:0005409,9.88e-16,25;UBERON:0004119,1.54e-15,160;UBERON:0000925,1.54e-15,160;UBERON:0006595,1.54e-15,160;UBERON:0000160,1.12e-13,17;UBERON:0007023,4.42e-10,114;UBERON:0001041,2.36e-08,87;UBERON:0000059,1.30e-07,11;UBERON:0003127,3.60e-07,2;UBERON:0011216,4.09e-07,223;UBERON:0001829,4.22e-07,2;UBERON:0000341,4.78e-07,2;UBERON:0005177,8.13e-07,101 | |||
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| ||
|short_description=p5@BCAR3 | |short_description=p5@BCAR3 | ||
}} | }} |
Latest revision as of 21:45, 19 September 2015
Short description: | p5@BCAR3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BCAR3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000539242, uc001dpx.3, uc009wdm.1_5end |
EntrezGene: | BCAR3 |
HGNC: | 973 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive system | 4.91e-18 | 145 |
digestive tract | 4.91e-18 | 145 |
primitive gut | 4.91e-18 | 145 |
subdivision of digestive tract | 9.06e-18 | 118 |
gastrointestinal system | 9.88e-16 | 25 |
endoderm-derived structure | 1.54e-15 | 160 |
endoderm | 1.54e-15 | 160 |
presumptive endoderm | 1.54e-15 | 160 |
intestine | 1.12e-13 | 17 |
adult organism | 4.42e-10 | 114 |
foregut | 2.36e-08 | 87 |
large intestine | 1.30e-07 | 11 |
open tracheal system trachea | 3.60e-07 | 2 |
organ system subdivision | 4.09e-07 | 223 |
major salivary gland | 4.22e-07 | 2 |
throat | 4.78e-07 | 2 |
trunk region element | 8.13e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.16e-07 | 2 |