FFCP PHASE1:Hg19::chr17:38252990..38252995,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9572 | |EntrezGene=9572 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7962 | |HGNC=7962 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=36bp_to_uc010cwr.1_5end | |association_with_transcript=36bp_to_uc010cwr.1_5end | ||
|cluster_id=chr17:38252990..38252995,- | |||
|description=CAGE_peak_12_at_NR1D1_5end | |description=CAGE_peak_12_at_NR1D1_5end | ||
|id=chr17:38252990..38252995,- | |id=chr17:38252990..38252995,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002601;1.40e-14;1!CL:0002593;6.14e-08;2 | |ontology_enrichment_celltype_v019=CL:0002601;1.40e-14;1!CL:0002593;6.14e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002601,2.11e-14,1;CL:0002593,8.04e-08,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.71e-13!115;UBERON:0001049!5.76e-07!57;UBERON:0005068!5.76e-07!57;UBERON:0006241!5.76e-07!57;UBERON:0007135!5.76e-07!57 | |ontology_enrichment_uberon=UBERON:0007023!1.71e-13!115;UBERON:0001049!5.76e-07!57;UBERON:0005068!5.76e-07!57;UBERON:0006241!5.76e-07!57;UBERON:0007135!5.76e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0001871;1.27e-08;6!UBERON:0002771;3.81e-08;2!UBERON:0001905;6.14e-08;2!UBERON:0002757;6.14e-08;2!UBERON:0010134;6.14e-08;2!UBERON:0005408;6.14e-08;2!UBERON:0002456;6.14e-08;2!UBERON:0001899;6.14e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0001871;1.27e-08;6!UBERON:0002771;3.81e-08;2!UBERON:0001905;6.14e-08;2!UBERON:0002757;6.14e-08;2!UBERON:0010134;6.14e-08;2!UBERON:0005408;6.14e-08;2!UBERON:0002456;6.14e-08;2!UBERON:0001899;6.14e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001871,1.37e-08,6;UBERON:0002771,3.82e-08,2;UBERON:0002456,8.04e-08,2;UBERON:0001905,8.60e-08,2;UBERON:0002757,8.60e-08,2;UBERON:0010134,8.60e-08,2;UBERON:0005408,8.60e-08,2;UBERON:0001899,8.60e-08,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.157421562627358,0,0,0,0.919421224478927,0,0,0,0,0,0,0.200544447470142,0,0,0.32389366601898,0,0.145398238779565,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0.411202997999018,0,0,0,0,0,0,0.221533894583621,0.541607727530031,0.512365278902701,0.260118695119756,0,0,0,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0.175669571386252,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.309977343527296,0,0.741800787835671,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0.113432183160021,0.358779271377724,0,0.211931901159562,0,0.206105058476878,0.257640540045629,0.18611685633159,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0.403008392910561,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0.337169380156203,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.329250856225877,0,0,0.0925884451585296,0.325808305310325,0,0,0,0.117408694235822,0.288732895522148,0,0,0,0,0,0,0,0,0.16798212819886,0,0.268675568108545,0.290633938513962,0,0,0.088048434013226,0.207328115540772,0.288239906833923,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0.499864955910285,0,0.502257091432126,0,0,0,0,0,0,0,0.112085143993527,0,0.646882724578552,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0.303127571446259,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0.164254312027618,0.519254429183621,0.116210378459959,0,0,0.276242966807689,0,0,0.131124414959424,0,0,0,1.46139224653261,0,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0.515205058238611,0.0915694648183434,0,0,0.650060246036521,0,0.096670718292122,0,0.15350367472613,0,0,0,0,0,0.330569830721956,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0.66343897524122,0,0,0,0,0,0.281695602532241,0,0,0,1.06428319221179,0,0,0,0,0,0.670302275535787,1.08890984861323,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.439524537815682,0,0.222886768554957,0,0.23874448473769,0,0.307160702099232,0.994147647766298,0.281338832821026,0.445234820091624,0,0,0.597743964753209,0,0.503865495708552,0,0.123084805461069,0,0,0.179021174675609,0,0.295930216910801,0,0,0,0.463840490809256,0,0.260427761085233,0,0,0,0,0,0,0.583209226766509,0,0,0.241192877250816,3.05163472634166,0.884634079449797,0.295547618953547,0.438770794307945,0.21787692703798,0,0.769502585037971,0,0,0,0.108647371922008,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0.347119476670262,0.0979923974143777,0,0,0,0.0967563312890851,0.219267951258557,0.0821154570532092,0.290967049465258,0,1.12990370390266,0,0.19871461170299,0.126621591911757,0,0,0,0,0,0.114536596165916,0.171594997861965,1.00838358591705,0.248505071130865,0,0,0.104602846312333,0.101998217636322,0.288950589901519,0,0.273810757783986,0,0.429765441419957,0,0,0,0,0,0.429226048136571,0,0.0671834724867263,0.360299883542404,0,0.0787831823072236,0.247247575143499,0.0674035438541849,0.0984274815147488,0,0,0.408610218334727,0,0,0,0,0,0.364497339948148,0,0,0.104909176269996,0.105600336519406,0,0,0.714695326373367,0,0,0,0,0.653174720218818,0,0.082092520749339,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.213574825135389,0.157204305099666,0,0.496166021811951,0.197611631897944,0,0,0,0,0,0.327872630709804,0.157054096250234,0.886068179966986,2.07444650333337,0.500763722825999,0,0.110929051536852,0.124192805882767,0.138348634936231,0,0,0,0,0,0.144921028610825,0.298509605773748,0.233713309847224,0,0.378806010550178,0,0.889811221596536,0.228840068396924,0.151230923763239,0.932623203496683,0,0,0,0,0,0,0.521745061811734,0.601030435988874,0,0,0,0.322231671127465,0.464033759878494,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,0,0,0.226705925512272,0,0.244736704506468,0.179088841081487,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0.245772908753719,0,0,0,0.344429959321631,0,0.184105950251841,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.192687675289379,1.41696576325585,0.319267718114302,0,0,0.553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| ||
|short_description=p12@NR1D1 | |short_description=p12@NR1D1 | ||
}} | }} |
Latest revision as of 23:58, 19 September 2015
Short description: | p12@NR1D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_NR1D1_5end |
Coexpression cluster: | NA |
Association with transcript: | 36bp_to_uc010cwr.1_5end |
EntrezGene: | NR1D1 |
HGNC: | 7962 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterine smooth muscle cell | 2.11e-14 | 1 |
smooth muscle cell of the internal thoracic artery | 8.04e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
temporal lobe | 1.37e-08 | 6 |
middle temporal gyrus | 3.82e-08 | 2 |
internal thoracic artery | 8.04e-08 | 2 |
pineal body | 8.60e-08 | 2 |
regional part of epithalamus | 8.60e-08 | 2 |
secretory circumventricular organ | 8.60e-08 | 2 |
circumventricular organ | 8.60e-08 | 2 |
epithalamus | 8.60e-08 | 2 |