FFCP PHASE1:Hg19::chr18:56246186..56246215,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115701 | |EntrezGene=115701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |HGNC=20565 | ||
|TSSclassifier=strong | |||
|UniProt=Q86TB3 | |UniProt=Q86TB3 | ||
|association_with_transcript=87bp_to_AY044450_5end | |association_with_transcript=87bp_to_AY044450_5end | ||
|cluster_id=chr18:56246186..56246215,- | |||
|description=CAGE_peak_10_at_ALPK2_5end | |description=CAGE_peak_10_at_ALPK2_5end | ||
|id=chr18:56246186..56246215,- | |id=chr18:56246186..56246215,- | ||
|ontology_enrichment_celltype=CL:0000055!1.06e-21!180;CL:0000057!1.42e-19!75;CL:0002620!3.65e-11!23;CL:0000144!8.30e-10!625;CL:0000548!1.86e-09!679;CL:0000004!1.86e-09!679;CL:0000255!1.86e-09!679;CL:0000012!4.20e-09!682;CL:0000048!5.73e-09!430;CL:0000723!2.88e-08!436;CL:0002371!4.09e-08!591;CL:0000077!4.14e-08!19;CL:0000219!8.36e-08!390;CL:0000034!1.17e-07!444;CL:0000134!5.29e-07!358;CL:0002320!9.92e-07!365 | |ontology_enrichment_celltype=CL:0000055!1.06e-21!180;CL:0000057!1.42e-19!75;CL:0002620!3.65e-11!23;CL:0000144!8.30e-10!625;CL:0000548!1.86e-09!679;CL:0000004!1.86e-09!679;CL:0000255!1.86e-09!679;CL:0000012!4.20e-09!682;CL:0000048!5.73e-09!430;CL:0000723!2.88e-08!436;CL:0002371!4.09e-08!591;CL:0000077!4.14e-08!19;CL:0000219!8.36e-08!390;CL:0000034!1.17e-07!444;CL:0000134!5.29e-07!358;CL:0002320!9.92e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0002620;7.13e-17;23!CL:0000057;7.72e-07;73!CL:0002334;8.53e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,8.50e-17,23;CL:0000057,3.13e-15,76;CL:0000219,2.66e-09,386;CL:0000134,2.02e-08,354;CL:0002320,6.46e-08,361;CL:0000048,1.34e-07,427;CL:0000723,3.15e-07,433;CL:0002334,8.94e-07,12;CL:0000034,9.42e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;6.94e-10;5!DOID:450;6.94e-10;5!DOID:66;6.94e-10;5!DOID:423;6.94e-10;5!DOID:0080000;6.94e-10;5!DOID:11722;6.94e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.85e-10,5;DOID:450,6.85e-10,5;DOID:66,6.85e-10,5;DOID:423,6.85e-10,5;DOID:0080000,6.85e-10,5;DOID:11722,6.85e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0002384!9.68e-08!375 | |ontology_enrichment_uberon=UBERON:0002384!9.68e-08!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.30e-10;6!UBERON:0002358;1.30e-10;6!UBERON:0003684;1.30e-10;6!UBERON:0001178;1.30e-10;6!UBERON:0004457;7.80e-09;9!UBERON:0000042;7.80e-09;9!UBERON:0002097;9.43e-09;41!UBERON:0002199;1.63e-07;46!UBERON:0002416;1.63e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,5.91e-11,41;UBERON:0003688,1.06e-10,6;UBERON:0002358,1.06e-10,6;UBERON:0003684,1.06e-10,6;UBERON:0001178,1.06e-10,6;UBERON:0002199,2.82e-10,46;UBERON:0002416,2.82e-10,46;UBERON:0002384,3.40e-08,371;UBERON:0003102,4.42e-07,99 | |||
|phase1_expression=1.63510541343501,1.71280419112787,1.9733616573436,4.00293193412522,1.34088328328186,0,0,0,0,0,0,1.31064823278103,1.05506791291381,0.247532705920093,0,0.672325146451775,0,0,0,0.246242116153576,0,1.25381888591235,3.43483184557268,2.46373965131192,2.51085279189606,0,0.328402357799783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619412741790207,0.28769239232215,0.768482119587302,1.6553756092201,0,0.645484683583826,0,0,0.545812300115692,0.674170453335254,0.306083892370903,0.962787081228281,0.639337125799041,0,0,0,0,0,0,0,0.521482918420201,0,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.2194645408365,0,2.00535164254356,0.434539556882471,1.5905718941022,0.486634870302636,0.661743720148475,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96971951695318,1.2663051166458,9.1362334761121,4.30254931123221,0.354668382198357,5.60677600142307,0,0.49333509683432,0,0.269421344139376,0.163461903113459,0.151357427644931,0.576175924479999,0.937285727335186,0,0,0,2.3486899728753,1.29498355494505,0.280901613404497,0,0,0.826606249406124,1.18800285728205,2.71993622206413,0,0,0,0.125118519871964,0.277064115484183,0.438977620880838,3.98434134538726,0.600952235626387,0.113432183160021,6.63741652048789,4.05759038755278,4.87443372666992,2.70081986475962,3.29768093563004,10.3056216018252,2.41951913231067,2.86919764810153,2.72823614451356,8.07788077581166,6.62759270224555,0.969876340912871,5.68015348026583,2.31729825923573,1.18692414617341,0,0.272746120590835,0,0,0,0,0.310983165046111,0,0,1.56449532329816,0,0,0.928735856063958,1.44375896333917,0.354920400119532,0,0.241011029883482,0.441175890929576,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,1.52631302506568,0,0,0,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.448524337381443,1.30788020649984,0.5867062865676,3.36106460970222,3.57656445851882,0,1.59562869950922,0,0,0,0,3.28849385413739,0,0,0,3.55391948742546,0,2.71295439353627,3.48613383440118,1.49959486773086,0,0,0,1.91699884393266,1.14861935834114,0,0.868687840005475,0,0.358121926479791,1.2329365839288,0,0,0,0.254094624222463,0,0.773288812777695,0.502548796003046,0.637938751653163,0,0,0,0.24538298343828,0,0,1.66376689224646,2.85486382075459,2.83864347061082,1.28855556491985,0.601892199455438,2.27407504055985,1.03473071292505,0.664225598535437,0.184369168541703,2.08520674723399,0,0,0,0,0,0.303127571446259,3.32870879020994,0.907170879989041,2.72918588600655,10.7423381301644,3.08726103876381,4.22859192543813,4.09365799253363,3.21707842287215,0,0.616838775210622,1.42049380250502,0.574890092096664,0,0.464841513839837,0,0,0,2.87036120411517,2.54927635209404,2.88473712910733,0,0.15403067420883,0,0,0.211103257785751,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,8.03419649220798,1.16004861950546,0,0.15350367472613,0,1.39646318328756,0,0.255679882248303,2.1367688555217,0,0,0,0,0.464845549297286,8.49993336442728,0,0,0,0.869932992075073,0.18532421910392,0.429374660225974,0.744316738719335,0.316379424718726,1.14378116354295,0.255897791311334,0.42793898803392,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,0,0,0,3.00299805097569,3.39373036688911,0,0,0,0,0,0,0.608731130888112,0.30982349809975,0,0.143411352204052,1.47373561519682,0.7133421029625,0,0.633322905892992,1.97576935775941,0,0.699869440489966,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0.23874448473769,0,0.307160702099232,0,0,0,0.494411622680279,0,0,0,0,0.613612095012929,0,3.73247505194169,0.359473404589307,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.868124974666461,0,0,0,0,0,0,0.980446171670911,0,0,1.59518878185802,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0.843992258112108,0,0.141353071433941,0,0,0,0,3.85477467284809,2.59484271787656,1.14864144456001,0,0.802577647298789,0,0,0,0,0,0,0,0,0.751617097072463,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0.959293472527256,0,0,0,0.400794101257669,0,1.79828648623917,0,0,0,0,0.124252535565433,0,0.951329442515298,0.941425616810999,2.54995544090804,2.02265412931063,0,0,0,0.429765441419957,0,0.279282401272254,0,0.717873024576814,0.199679000498991,1.28767814440971,0.223171457441873,0.268733889946905,1.44119953416961,0,0.236349546921671,0.247247575143499,0.13480708770837,0,1.86281330544726,0,0,0,0,0,0.2249738915515,0,0,0,0.236417121897595,0.0524545881349981,0.422401346077626,2.68931008999267,0,0,0,0,0,0.864221491201268,0,0,0,2.04465626142506,0.113312091520126,0.439656701034247,0,0,0,1.02652102730598,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895528817321244,3.50569964770837,1.10961172300523,1.13641803165053,0,0,0.915360273587694,0.302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| ||
|short_description=p10@ALPK2 | |short_description=p10@ALPK2 | ||
}} | }} |
Latest revision as of 23:59, 19 September 2015
Short description: | p10@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ALPK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 87bp_to_AY044450_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | Q86TB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 8.50e-17 | 23 |
fibroblast | 3.13e-15 | 76 |
motile cell | 2.66e-09 | 386 |
mesenchymal cell | 2.02e-08 | 354 |
connective tissue cell | 6.46e-08 | 361 |
multi fate stem cell | 1.34e-07 | 427 |
somatic stem cell | 3.15e-07 | 433 |
preadipocyte | 8.94e-07 | 12 |
stem cell | 9.42e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
skin of body | 5.91e-11 | 41 |
omentum | 1.06e-10 | 6 |
peritoneum | 1.06e-10 | 6 |
abdominal cavity | 1.06e-10 | 6 |
visceral peritoneum | 1.06e-10 | 6 |
integument | 2.82e-10 | 46 |
integumental system | 2.82e-10 | 46 |
connective tissue | 3.40e-08 | 371 |
surface structure | 4.42e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.85e-10 | 5 |
myotonic disease | 6.85e-10 | 5 |
muscle tissue disease | 6.85e-10 | 5 |
myopathy | 6.85e-10 | 5 |
muscular disease | 6.85e-10 | 5 |
myotonic dystrophy | 6.85e-10 | 5 |