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FFCP PHASE1:Hg19::chr18:56246186..56246215,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=115701
|EntrezGene=115701
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=20565
|HGNC=20565
|TSSclassifier=strong
|UniProt=Q86TB3
|UniProt=Q86TB3
|association_with_transcript=87bp_to_AY044450_5end
|association_with_transcript=87bp_to_AY044450_5end
|cluster_id=chr18:56246186..56246215,-
|description=CAGE_peak_10_at_ALPK2_5end
|description=CAGE_peak_10_at_ALPK2_5end
|id=chr18:56246186..56246215,-
|id=chr18:56246186..56246215,-
|ontology_enrichment_celltype=CL:0000055!1.06e-21!180;CL:0000057!1.42e-19!75;CL:0002620!3.65e-11!23;CL:0000144!8.30e-10!625;CL:0000548!1.86e-09!679;CL:0000004!1.86e-09!679;CL:0000255!1.86e-09!679;CL:0000012!4.20e-09!682;CL:0000048!5.73e-09!430;CL:0000723!2.88e-08!436;CL:0002371!4.09e-08!591;CL:0000077!4.14e-08!19;CL:0000219!8.36e-08!390;CL:0000034!1.17e-07!444;CL:0000134!5.29e-07!358;CL:0002320!9.92e-07!365
|ontology_enrichment_celltype=CL:0000055!1.06e-21!180;CL:0000057!1.42e-19!75;CL:0002620!3.65e-11!23;CL:0000144!8.30e-10!625;CL:0000548!1.86e-09!679;CL:0000004!1.86e-09!679;CL:0000255!1.86e-09!679;CL:0000012!4.20e-09!682;CL:0000048!5.73e-09!430;CL:0000723!2.88e-08!436;CL:0002371!4.09e-08!591;CL:0000077!4.14e-08!19;CL:0000219!8.36e-08!390;CL:0000034!1.17e-07!444;CL:0000134!5.29e-07!358;CL:0002320!9.92e-07!365
|ontology_enrichment_celltype_v019=CL:0002620;7.13e-17;23!CL:0000057;7.72e-07;73!CL:0002334;8.53e-07;12
|ontology_enrichment_celltype_v019=CL:0002620;7.13e-17;23!CL:0000057;7.72e-07;73!CL:0002334;8.53e-07;12
|ontology_enrichment_celltype_v019_2=CL:0002620,8.50e-17,23;CL:0000057,3.13e-15,76;CL:0000219,2.66e-09,386;CL:0000134,2.02e-08,354;CL:0002320,6.46e-08,361;CL:0000048,1.34e-07,427;CL:0000723,3.15e-07,433;CL:0002334,8.94e-07,12;CL:0000034,9.42e-07,441
|ontology_enrichment_development_v019=
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:17;6.94e-10;5!DOID:450;6.94e-10;5!DOID:66;6.94e-10;5!DOID:423;6.94e-10;5!DOID:0080000;6.94e-10;5!DOID:11722;6.94e-10;5
|ontology_enrichment_disease_v019=DOID:17;6.94e-10;5!DOID:450;6.94e-10;5!DOID:66;6.94e-10;5!DOID:423;6.94e-10;5!DOID:0080000;6.94e-10;5!DOID:11722;6.94e-10;5
|ontology_enrichment_disease_v019_2=DOID:17,6.85e-10,5;DOID:450,6.85e-10,5;DOID:66,6.85e-10,5;DOID:423,6.85e-10,5;DOID:0080000,6.85e-10,5;DOID:11722,6.85e-10,5
|ontology_enrichment_uberon=UBERON:0002384!9.68e-08!375
|ontology_enrichment_uberon=UBERON:0002384!9.68e-08!375
|ontology_enrichment_uberon_v019=UBERON:0003688;1.30e-10;6!UBERON:0002358;1.30e-10;6!UBERON:0003684;1.30e-10;6!UBERON:0001178;1.30e-10;6!UBERON:0004457;7.80e-09;9!UBERON:0000042;7.80e-09;9!UBERON:0002097;9.43e-09;41!UBERON:0002199;1.63e-07;46!UBERON:0002416;1.63e-07;46
|ontology_enrichment_uberon_v019=UBERON:0003688;1.30e-10;6!UBERON:0002358;1.30e-10;6!UBERON:0003684;1.30e-10;6!UBERON:0001178;1.30e-10;6!UBERON:0004457;7.80e-09;9!UBERON:0000042;7.80e-09;9!UBERON:0002097;9.43e-09;41!UBERON:0002199;1.63e-07;46!UBERON:0002416;1.63e-07;46
|ontology_enrichment_uberon_v019_2=UBERON:0002097,5.91e-11,41;UBERON:0003688,1.06e-10,6;UBERON:0002358,1.06e-10,6;UBERON:0003684,1.06e-10,6;UBERON:0001178,1.06e-10,6;UBERON:0002199,2.82e-10,46;UBERON:0002416,2.82e-10,46;UBERON:0002384,3.40e-08,371;UBERON:0003102,4.42e-07,99
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|short_description=p10@ALPK2
|short_description=p10@ALPK2
}}
}}

Latest revision as of 23:59, 19 September 2015

Short description:p10@ALPK2
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_10_at_ALPK2_5end
Coexpression cluster:NA
Association with transcript: 87bp_to_AY044450_5end
EntrezGene:ALPK2
HGNC: 20565
UniProt: Q86TB3
Genome view:ZENBU


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CAGE Expression




0.0
2.5
5.0
7.5
10.0
12.5




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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data