FFCP PHASE1:Hg19::chr3:122694165..122694189,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54437 | |EntrezGene=54437 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10737 | |HGNC=10737 | ||
|TSSclassifier=strong | |||
|UniProt=C9JTX2 | |UniProt=C9JTX2 | ||
|association_with_transcript=27bp_to_ENST00000449546_5end | |association_with_transcript=27bp_to_ENST00000449546_5end | ||
|cluster_id=chr3:122694165..122694189,- | |||
|coexpression_cluster_id=C182 | |||
|description=CAGE_peak_7_at_SEMA5B_5end | |description=CAGE_peak_7_at_SEMA5B_5end | ||
|id=chr3:122694165..122694189,- | |id=chr3:122694165..122694189,- | ||
|ontology_enrichment_celltype=CL:0002605!1.34e-13!3;CL:0000128!3.42e-10!7;CL:0000126!3.42e-10!7;CL:0000127!3.42e-10!7;CL:0002453!3.42e-10!7;CL:0000322!4.88e-07!3 | |ontology_enrichment_celltype=CL:0002605!1.34e-13!3;CL:0000128!3.42e-10!7;CL:0000126!3.42e-10!7;CL:0000127!3.42e-10!7;CL:0002453!3.42e-10!7;CL:0000322!4.88e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000322;1.96e-14;3!CL:0002541;1.96e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.83e-14,3;CL:0002541,2.09e-14,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;6.30e-21;2!DOID:3908;3.35e-09;5!DOID:305;5.17e-07;106!DOID:1325;6.21e-07;7!DOID:3904;6.21e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,5.70e-21,2;DOID:3908,3.22e-09,5;DOID:1325,6.04e-07,7;DOID:3904,6.04e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0004821!4.88e-07!3;UBERON:0003215!4.88e-07!3;UBERON:0002299!4.88e-07!3;UBERON:0006524!4.88e-07!3;UBERON:0008874!4.88e-07!3;UBERON:0002169!4.88e-07!3;UBERON:0004894!4.88e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006562;4.21e-21;2!UBERON:0004903;6.30e-21;2!UBERON:0002173;6.30e-21;2!UBERON:0002186;6.30e-21;2!UBERON:0004821;1.96e-14;3!UBERON:0007499;1.96e-14;3!UBERON:0003215;1.96e-14;3!UBERON:0010368;1.96e-14;3!UBERON:0009911;1.96e-14;3!UBERON:0002299;1.96e-14;3!UBERON:0003124;1.96e-14;3!UBERON:0000920;1.96e-14;3!UBERON:0006524;1.96e-14;3!UBERON:0008874;1.96e-14;3!UBERON:0002169;1.96e-14;3!UBERON:0004894;1.96e-14;3!UBERON:0009856;3.60e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,5.70e-21,2;UBERON:0002173,5.70e-21,2;UBERON:0002186,5.70e-21,2;UBERON:0004821,1.83e-14,3;UBERON:0003215,1.83e-14,3;UBERON:0010368,1.83e-14,3;UBERON:0009911,1.83e-14,3;UBERON:0002299,1.83e-14,3;UBERON:0006524,1.83e-14,3;UBERON:0008874,1.83e-14,3;UBERON:0002169,1.83e-14,3;UBERON:0004894,1.83e-14,3;UBERON:0000920,2.09e-14,3;UBERON:0003124,6.39e-07,7 | |||
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| ||
|short_description=p7@SEMA5B | |short_description=p7@SEMA5B | ||
}} | }} |
Latest revision as of 00:33, 20 September 2015
Short description: | p7@SEMA5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SEMA5B_5end |
Coexpression cluster: | C182_renal_mature_mesothelioma_lung_Mammary_Adipocyte_acute |
Association with transcript: | 27bp_to_ENST00000449546_5end |
EntrezGene: | SEMA5B |
HGNC: | 10737 |
UniProt: | C9JTX2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.83e-14 | 3 |
chorionic membrane mesenchymal stem cell | 2.09e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 5.70e-21 | 2 |
alveolar duct | 5.70e-21 | 2 |
bronchiole | 5.70e-21 | 2 |
pulmonary alveolus epithelium | 1.83e-14 | 3 |
alveolus | 1.83e-14 | 3 |
pulmonary lobule | 1.83e-14 | 3 |
lobule | 1.83e-14 | 3 |
alveolus of lung | 1.83e-14 | 3 |
alveolar system | 1.83e-14 | 3 |
pulmonary acinus | 1.83e-14 | 3 |
alveolar sac | 1.83e-14 | 3 |
alveolar wall | 1.83e-14 | 3 |
egg chorion | 2.09e-14 | 3 |
chorion | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 5.70e-21 | 2 |
non-small cell lung carcinoma | 3.22e-09 | 5 |
bronchus cancer | 6.04e-07 | 7 |
bronchogenic carcinoma | 6.04e-07 | 7 |