FFCP PHASE1:Hg19::chr18:56338688..56338708,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:56338688..56338708,+
|short_description=p1@MALT1
|description=CAGE_peak_1_at_MALT1_5end
|association_with_transcript=70bp_to_ENST00000348428,NM_006785,NM_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10892 | |EntrezGene=10892 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6819 | |HGNC=6819 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UDY8 | |UniProt=Q9UDY8 | ||
|association_with_transcript=70bp_to_ENST00000348428,NM_006785,NM_173844,uc002lhm.1,uc002lhn.1_5end | |||
|cluster_id=chr18:56338688..56338708,+ | |||
|coexpression_cluster_id=C3732 | |||
|description=CAGE_peak_1_at_MALT1_5end | |||
|id=chr18:56338688..56338708,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.17e-25!140;CL:0002057!6.16e-23!42;CL:0002087!1.47e-22!119;CL:0000860!8.32e-21!45;CL:0002031!2.31e-19!124;CL:0002009!4.79e-13!65;CL:0002194!4.85e-12!63;CL:0000576!4.85e-12!63;CL:0000040!4.85e-12!63;CL:0000559!4.85e-12!63;CL:0000037!7.17e-12!172;CL:0000566!7.17e-12!172;CL:0000557!1.94e-11!71;CL:0000766!6.07e-11!76;CL:0002032!1.05e-10!165;CL:0000837!1.05e-10!165;CL:0000988!4.80e-10!182;CL:0000542!7.63e-10!53;CL:0000051!7.63e-10!53;CL:0000838!1.25e-09!52;CL:0000839!2.16e-09!70;CL:0000134!7.89e-07!358;CL:0000945!8.17e-07!24;CL:0000826!8.17e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.27e-19;33!CL:0002057;9.27e-19;33!CL:0000576;3.80e-12;48!CL:0000473;1.55e-11;39!CL:0000234;1.55e-11;39!CL:0002087;2.66e-09;104!CL:0000766;4.43e-07;69!CL:0000945;6.47e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.25e-25,136;CL:0002087,2.59e-23,115;CL:0000860,5.19e-23,42;CL:0002057,5.19e-23,42;CL:0002031,7.20e-20,120;CL:0000473,7.06e-18,48;CL:0000234,7.06e-18,48;CL:0002009,6.72e-14,61;CL:0002194,7.54e-13,59;CL:0000576,7.54e-13,59;CL:0000040,7.54e-13,59;CL:0000559,7.54e-13,59;CL:0000037,2.21e-12,168;CL:0000557,4.85e-12,67;CL:0000766,1.78e-11,72;CL:0002032,3.44e-11,161;CL:0000837,3.44e-11,161;CL:0000988,7.32e-11,177;CL:0000839,7.43e-10,66;CL:0000542,8.16e-10,53;CL:0000051,8.16e-10,53;CL:0000838,1.34e-09,52;CL:0000134,1.21e-07,354;CL:0000219,1.74e-07,386;CL:0000945,8.55e-07,24;CL:0000826,8.55e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;4.38e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.50e-09!102;UBERON:0003061!3.50e-09!102;UBERON:0002371!1.94e-08!80;UBERON:0001474!3.76e-07!86;UBERON:0002405!7.81e-07!115;UBERON:0002193!9.64e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.25e-09,98;UBERON:0003061,1.25e-09,98;UBERON:0002371,6.80e-09,76;UBERON:0002405,1.59e-07,93;UBERON:0001474,1.76e-07,82;UBERON:0002384,1.89e-07,371;UBERON:0002193,4.64e-07,108 | |||
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| ||
|short_description=p1@MALT1 | |||
}} | }} |
Latest revision as of 00:36, 20 September 2015
Short description: | p1@MALT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MALT1_5end |
Coexpression cluster: | C3732_migratory_immature_CD14_Astrocyte_papillotubular_clear_mycosis |
Association with transcript: | 70bp_to_ENST00000348428, NM_006785, NM_173844, uc002lhm.1, uc002lhn.1_5end |
EntrezGene: | MALT1 |
HGNC: | 6819 |
UniProt: | Q9UDY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.25e-25 | 136 |
nongranular leukocyte | 2.59e-23 | 115 |
classical monocyte | 5.19e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.19e-23 | 42 |
hematopoietic lineage restricted progenitor cell | 7.20e-20 | 120 |
defensive cell | 7.06e-18 | 48 |
phagocyte | 7.06e-18 | 48 |
macrophage dendritic cell progenitor | 6.72e-14 | 61 |
monopoietic cell | 7.54e-13 | 59 |
monocyte | 7.54e-13 | 59 |
monoblast | 7.54e-13 | 59 |
promonocyte | 7.54e-13 | 59 |
hematopoietic stem cell | 2.21e-12 | 168 |
granulocyte monocyte progenitor cell | 4.85e-12 | 67 |
myeloid leukocyte | 1.78e-11 | 72 |
hematopoietic oligopotent progenitor cell | 3.44e-11 | 161 |
hematopoietic multipotent progenitor cell | 3.44e-11 | 161 |
hematopoietic cell | 7.32e-11 | 177 |
myeloid lineage restricted progenitor cell | 7.43e-10 | 66 |
lymphocyte | 8.16e-10 | 53 |
common lymphoid progenitor | 8.16e-10 | 53 |
lymphoid lineage restricted progenitor cell | 1.34e-09 | 52 |
mesenchymal cell | 1.21e-07 | 354 |
motile cell | 1.74e-07 | 386 |
lymphocyte of B lineage | 8.55e-07 | 24 |
pro-B cell | 8.55e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.25e-09 | 98 |
blood island | 1.25e-09 | 98 |
bone marrow | 6.80e-09 | 76 |
immune system | 1.59e-07 | 93 |
bone element | 1.76e-07 | 82 |
connective tissue | 1.89e-07 | 371 |
hemolymphoid system | 4.64e-07 | 108 |