FFCP PHASE1:Hg19::chr9:110252035..110252057,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9314 | |EntrezGene=9314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6348 | |HGNC=6348 | ||
|TSSclassifier=strong | |||
|UniProt=B7ZBT1,O43474 | |UniProt=B7ZBT1,O43474 | ||
|association_with_transcript=0bp_to_ENST00000439281,NM_004235,uc004bdg.2,uc004bdh.2_5end | |association_with_transcript=0bp_to_ENST00000439281,NM_004235,uc004bdg.2,uc004bdh.2_5end | ||
|cluster_id=chr9:110252035..110252057,- | |||
|description=CAGE_peak_1_at_KLF4_5end | |description=CAGE_peak_1_at_KLF4_5end | ||
|id=chr9:110252035..110252057,- | |id=chr9:110252035..110252057,- | ||
|ontology_enrichment_celltype=CL:0002057!7.03e-26!42;CL:0000860!4.93e-25!45;CL:0000557!6.16e-20!71;CL:0002009!8.77e-20!65;CL:0000766!1.60e-19!76;CL:0002194!1.09e-18!63;CL:0000576!1.09e-18!63;CL:0000040!1.09e-18!63;CL:0000559!1.09e-18!63;CL:0000839!1.77e-16!70;CL:0002393!4.18e-07!9;CL:0002397!4.18e-07!9 | |ontology_enrichment_celltype=CL:0002057!7.03e-26!42;CL:0000860!4.93e-25!45;CL:0000557!6.16e-20!71;CL:0002009!8.77e-20!65;CL:0000766!1.60e-19!76;CL:0002194!1.09e-18!63;CL:0000576!1.09e-18!63;CL:0000040!1.09e-18!63;CL:0000559!1.09e-18!63;CL:0000839!1.77e-16!70;CL:0002393!4.18e-07!9;CL:0002397!4.18e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.83e-18;33!CL:0002057;1.83e-18;33!CL:0000576;1.86e-14;48!CL:0000473;1.23e-12;39!CL:0000234;1.23e-12;39!CL:0000766;5.96e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.30e-26,42;CL:0002057,6.30e-26,42;CL:0000473,7.82e-22,48;CL:0000234,7.82e-22,48;CL:0000557,9.24e-21,67;CL:0002009,1.45e-20,61;CL:0000766,2.92e-20,72;CL:0002194,1.91e-19,59;CL:0000576,1.91e-19,59;CL:0000040,1.91e-19,59;CL:0000559,1.91e-19,59;CL:0000839,3.72e-17,66;CL:0002393,4.08e-07,9;CL:0002397,4.08e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;8.88e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!3.59e-18!86;UBERON:0002371!1.49e-17!80;UBERON:0004765!1.76e-17!101;UBERON:0001434!1.76e-17!101;UBERON:0002390!1.12e-16!102;UBERON:0003061!1.12e-16!102;UBERON:0000062!1.60e-16!511;UBERON:0002193!3.98e-15!112;UBERON:0000926!2.46e-12!448;UBERON:0004120!2.46e-12!448;UBERON:0006603!2.46e-12!448;UBERON:0000468!2.21e-10!659;UBERON:0002405!2.42e-10!115;UBERON:0000467!2.99e-09!625;UBERON:0000480!5.86e-09!626;UBERON:0002204!4.33e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,9.17e-19,82;UBERON:0002371,3.55e-18,76;UBERON:0002390,3.37e-17,98;UBERON:0003061,3.37e-17,98;UBERON:0001434,3.89e-17,100;UBERON:0004765,4.76e-17,90;UBERON:0002193,1.53e-15,108;UBERON:0002405,1.96e-14,93;UBERON:0002204,4.88e-07,167 | |||
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| ||
|short_description=p1@KLF4 | |short_description=p1@KLF4 | ||
}} | }} |
Latest revision as of 01:05, 20 September 2015
Short description: | p1@KLF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KLF4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000439281, NM_004235, uc004bdg.2, uc004bdh.2_5end |
EntrezGene: | KLF4 |
HGNC: | 6348 |
UniProt: | B7ZBT1O43474 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.30e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.30e-26 | 42 |
defensive cell | 7.82e-22 | 48 |
phagocyte | 7.82e-22 | 48 |
granulocyte monocyte progenitor cell | 9.24e-21 | 67 |
macrophage dendritic cell progenitor | 1.45e-20 | 61 |
myeloid leukocyte | 2.92e-20 | 72 |
monopoietic cell | 1.91e-19 | 59 |
monocyte | 1.91e-19 | 59 |
monoblast | 1.91e-19 | 59 |
promonocyte | 1.91e-19 | 59 |
myeloid lineage restricted progenitor cell | 3.72e-17 | 66 |
intermediate monocyte | 4.08e-07 | 9 |
CD14-positive, CD16-positive monocyte | 4.08e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone element | 9.17e-19 | 82 |
bone marrow | 3.55e-18 | 76 |
hematopoietic system | 3.37e-17 | 98 |
blood island | 3.37e-17 | 98 |
skeletal system | 3.89e-17 | 100 |
skeletal element | 4.76e-17 | 90 |
hemolymphoid system | 1.53e-15 | 108 |
immune system | 1.96e-14 | 93 |
musculoskeletal system | 4.88e-07 | 167 |