FFCP PHASE1:Hg19::chr7:93204033..93204043,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=799 | |EntrezGene=799 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1440 | |HGNC=1440 | ||
|TSSclassifier=strong | |||
|UniProt=F5H605,P30988,A4D1G6 | |UniProt=F5H605,P30988,A4D1G6 | ||
|association_with_transcript=0bp_to_ENST00000359558,ENST00000360249,ENST00000426151,NM_001164737,NM_001742,uc003umw.2_5end | |association_with_transcript=0bp_to_ENST00000359558,ENST00000360249,ENST00000426151,NM_001164737,NM_001742,uc003umw.2_5end | ||
|cluster_id=chr7:93204033..93204043,- | |||
|coexpression_cluster_id=C224 | |coexpression_cluster_id=C224 | ||
|description=CAGE_peak_1_at_CALCR_5end | |description=CAGE_peak_1_at_CALCR_5end | ||
|id=chr7:93204033..93204043,- | |id=chr7:93204033..93204043,- | ||
|ontology_enrichment_celltype=CL:0002322!6.97e-10!5;CL:0000540!6.03e-08!6;CL:0000031!6.03e-08!6;CL:0000404!6.03e-08!6 | |ontology_enrichment_celltype=CL:0002322!6.97e-10!5;CL:0000540!6.03e-08!6;CL:0000031!6.03e-08!6;CL:0000404!6.03e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0002535;3.82e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.82e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!1.01e-07!4;DOID:1612!1.01e-07!4 | |ontology_enrichment_disease=DOID:5093!1.01e-07!4;DOID:1612!1.01e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;1.61e-14;4!DOID:1612;1.61e-14;4!DOID:4468;3.56e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.61e-14,4;DOID:1612,1.61e-14,4;DOID:4468,3.56e-08,2 | |||
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| ||
|short_description=p1@CALCR | |short_description=p1@CALCR | ||
}} | }} |
Latest revision as of 01:12, 20 September 2015
Short description: | p1@CALCR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CALCR_5end |
Coexpression cluster: | C224_clear_serous_pleomorphic_choriocarcinoma_mesothelioma_amniotic_renal |
Association with transcript: | 0bp_to_ENST00000359558, ENST00000360249, ENST00000426151, NM_001164737, NM_001742, uc003umw.2_5end |
EntrezGene: | CALCR |
HGNC: | 1440 |
UniProt: | F5H605P30988A4D1G6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.82e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 9.36e-15 | 1 |
respiratory system muscle | 9.36e-15 | 1 |
skeletal muscle of trunk | 9.36e-15 | 1 |
respiratory system skeletal muscle | 9.36e-15 | 1 |
thoracic segment muscle | 9.36e-15 | 1 |
chest organ | 9.36e-15 | 1 |
muscle of trunk | 9.36e-15 | 1 |
diaphragm | 9.36e-15 | 1 |
future diaphragm | 9.36e-15 | 1 |
chest | 1.18e-11 | 11 |
brainstem | 1.21e-09 | 6 |
uterine epithelium | 3.82e-08 | 2 |
cervix epithelium | 3.82e-08 | 2 |
muscle structure | 5.02e-08 | 2 |
muscle organ | 5.02e-08 | 2 |
locus ceruleus | 6.58e-08 | 2 |
brainstem nucleus | 6.58e-08 | 2 |
hindbrain nucleus | 6.58e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.61e-14 | 4 |
breast cancer | 1.61e-14 | 4 |
clear cell adenocarcinoma | 3.56e-08 | 2 |