FFCP PHASE1:Hg19::chr4:100273894..100273908,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=126 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=251 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000505942,ENST00000511397_5end | |||
|cluster_id=chr4:100273894..100273908,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_ADH1C_5end | |||
|id=chr4:100273894..100273908,- | |||
|ontology_enrichment_celltype=CL:0000136!2.43e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;6.19e-07;13 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006595;1.10e-08;86!UBERON:0003104;2.30e-07;31!UBERON:0006603;6.73e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.49e-28!115;UBERON:0004921!1.91e-17!129;UBERON:0004185!1.91e-17!129;UBERON:0001007!8.00e-15!155;UBERON:0001555!8.00e-15!155;UBERON:0007026!8.00e-15!155;UBERON:0004119!8.98e-13!169;UBERON:0000925!8.98e-13!169;UBERON:0006595!8.98e-13!169;UBERON:0000077!1.98e-10!130;UBERON:0000481!3.06e-10!347;UBERON:0005409!1.57e-08!35;UBERON:0000466!1.87e-08!126;UBERON:0003104!1.96e-08!238;UBERON:0009142!1.96e-08!238;UBERON:0002100!2.11e-08!216;UBERON:0000475!2.38e-08!365;UBERON:0000160!2.87e-08!27;UBERON:0001041!1.62e-07!98;UBERON:0005177!1.82e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;3.75e-10;33!UBERON:0005409;8.13e-09;22!UBERON:0000160;1.54e-07;17!UBERON:0006947;8.26e-07;3!UBERON:0004054;8.26e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.14e-27,114;UBERON:0004921,4.00e-17,118;UBERON:0001007,6.01e-15,145;UBERON:0001555,6.01e-15,145;UBERON:0007026,6.01e-15,145;UBERON:0004119,1.53e-12,160;UBERON:0000925,1.53e-12,160;UBERON:0006595,1.53e-12,160;UBERON:0001041,1.78e-08,87;UBERON:0005177,1.33e-07,101;UBERON:0000160,1.52e-07,17;UBERON:0005409,1.54e-07,25;UBERON:0011216,5.56e-07,223;UBERON:0006947,6.28e-07,3;UBERON:0004054,6.28e-07,3;UBERON:0002100,8.99e-07,199 | |||
|phase1_expression=0.181678379270557,0.214100523890983,1.69145284915165,0,2.23480547213644,0,0,0.631719873426831,1.04474251279935,0,0,0,0,0.618831764800233,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0,0,0,5.17367348215965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,1.06400514659507,0,0,0,0,0,0,0,0,0.468642863667593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13152239773168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,409.418762474514,282.071411186479,104.569813482609,0,0.860919069801795,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33113834266366,0.500170521059677,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0.483437798366489,0,0,0.114814448164607,0.182091168006717,1.83574180943194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,970.337206686601,0,0,0,0,0,0,0,0.460511024178389,0,1.93356440762893,1.45016693914229,0.170453254832202,17.0051188085268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0.719489830333259,0,0.353437207037059,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,9.18252652865286,0,0,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,951.41725065013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.86032717087576,0,0,0,0,0,0,0,0,0,0,0,7.77067154179172,56.6382026838853,0,0,0,0,0.0898683511473268,2.32727527078292,0,3.45251919729268,0,0,0.969332746095218,0,0,0,0,2.17499872630438,1.93448862085349,2.79679015322043,0,0,0,0,0,0,0,0,0,0,0,0,3.15496059865568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,122.417217522656,106.060619839504,36.6618086960175,0,0,0,0.741412462787447,4.01288823649394,0.234264445725339,0,0.978323094660449,0,2.76209081994573,78.6439654316315,0,1.26373159256976,0,0,0,0,0,0,0,0,0.347119476670262,0,0,3.4945333648406,0,0,0,0,3.58859361007152,0,7.23138370497704,0,0,0,0,0,31.8044962161635,0,40.4894072203038,0,0.343189995723929,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,1.11712960508902,1.14580212005842,0,0.199679000498991,1.71690419254628,6.4719722658143,0.671834724867263,0,0,0,0,0,3.93709926058995,0,0,0,0,0,0,0,0,0,0.670869375198532,21.9867923364763,26.804294536984,0,0,0,7.14695326373367,6.62091970365432,0,0,0,0,0,0,0,0,203.414500345178,1.32506888912221,0,0,0.342173675768659,0.704815022316672,4.0579216775724,0.471612915298998,5.38510771951354,0.496166021811951,0,0,1.27668251554036,1.63205341010842,3.2589686222951,2.75711019087115,13.7706504898118,0.314108192500469,0,0,0,0.573409195690071,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0.308801447160972,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,43.5308279153162,0,0,0,0,0,3.45967510406583,0,28.9160184156244,0,0,0.147856086217045,0.202612753855184,0,0,0,0,0.548257766857182,6.94695649745012,0,3.19406069098988,0,0,0.606965604236632,0.455324382702595,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0,0,0,7.77081619220089,0,0,2.73947616152849,0.215927591218621,0,0.214429632529969,0,0,0,0,0,0,0,2.58136415292167,0,0.0852134047591577,1.69354820076372,0,0,0,0,0,2.19452264968085,4.53200186031526,17.3500143587057,1.1598144313382,0.485710993059139,0,0,0,11.0687160398181,0,0.150962843566674,129.729759779455,34.3138509991213,0,1.96118657403124,0,3.14093547383912,0.891139200981258,0,0.169927114687817,0,0.0644578879735772,0,0,0,5.13544746810677,37.2471558005724,3.21110498383179,1.43339583151451,0,0,0,113.211743870296,0,0.462175628631418,0,0,0,0,0,0,0,0,6.66852544320507,0.267964130156178,0,0,15.3528466968706,0.714193294391221,0,1.11734485732544,0,1.20929600728513,0,6.53150243690884,1.36893320434112,1.0776328482334,17.7871069373837,5.98788641782824,3.74455035610483,0,0,117.850665163842,0,1.1001729976458,0.406896178315738,1.33151354837103,6.64203518850387,0 | |||
|short_description=p1@ADH1C | |||
}} |
Latest revision as of 01:21, 20 September 2015
Short description: | p1@ADH1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADH1C_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000505942, ENST00000511397_5end |
EntrezGene: | ADH1C |
HGNC: | 251 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.14e-27 | 114 |
subdivision of digestive tract | 4.00e-17 | 118 |
digestive system | 6.01e-15 | 145 |
digestive tract | 6.01e-15 | 145 |
primitive gut | 6.01e-15 | 145 |
endoderm-derived structure | 1.53e-12 | 160 |
endoderm | 1.53e-12 | 160 |
presumptive endoderm | 1.53e-12 | 160 |
foregut | 1.78e-08 | 87 |
trunk region element | 1.33e-07 | 101 |
intestine | 1.52e-07 | 17 |
gastrointestinal system | 1.54e-07 | 25 |
organ system subdivision | 5.56e-07 | 223 |
male genital duct | 6.28e-07 | 3 |
internal male genitalia | 6.28e-07 | 3 |
trunk | 8.99e-07 | 199 |