FFCP PHASE1:Hg19::chr6:117198400..117198441,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222546 | |EntrezGene=222546 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21478 | |HGNC=21478 | ||
|TSSclassifier=strong | |||
|UniProt=Q8HWS3 | |UniProt=Q8HWS3 | ||
|association_with_transcript=0bp_to_ENST00000332958_5end | |association_with_transcript=0bp_to_ENST00000332958_5end | ||
|cluster_id=chr6:117198400..117198441,+ | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_1_at_RFX6_5end | |description=CAGE_peak_1_at_RFX6_5end | ||
|id=chr6:117198400..117198441,+ | |id=chr6:117198400..117198441,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.83e-09!5 | |ontology_enrichment_celltype=CL:0002322!1.83e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0002535;7.98e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,7.98e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.33e-17;1!UBERON:0007297;1.78e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.36e-21!27;UBERON:0005409!7.32e-19!35;UBERON:0000059!1.10e-16!11;UBERON:0001155!2.36e-14!9;UBERON:0004921!3.01e-10!129;UBERON:0004185!3.01e-10!129;UBERON:0001007!5.04e-10!155;UBERON:0001555!5.04e-10!155;UBERON:0007026!5.04e-10!155;UBERON:0004119!6.54e-10!169;UBERON:0000925!6.54e-10!169;UBERON:0006595!6.54e-10!169;UBERON:0004907!8.61e-10!5;UBERON:0007023!2.94e-09!115;UBERON:0001046!4.54e-09!19;UBERON:0003101!8.35e-08!22;UBERON:0000079!8.35e-08!22;UBERON:0002110!1.04e-07!3;UBERON:0006242!1.04e-07!3;UBERON:0003937!5.60e-07!12;UBERON:0005399!5.60e-07!12;UBERON:0000998!9.67e-07!1;UBERON:0006868!9.67e-07!1 | |ontology_enrichment_uberon=UBERON:0000160!8.36e-21!27;UBERON:0005409!7.32e-19!35;UBERON:0000059!1.10e-16!11;UBERON:0001155!2.36e-14!9;UBERON:0004921!3.01e-10!129;UBERON:0004185!3.01e-10!129;UBERON:0001007!5.04e-10!155;UBERON:0001555!5.04e-10!155;UBERON:0007026!5.04e-10!155;UBERON:0004119!6.54e-10!169;UBERON:0000925!6.54e-10!169;UBERON:0006595!6.54e-10!169;UBERON:0004907!8.61e-10!5;UBERON:0007023!2.94e-09!115;UBERON:0001046!4.54e-09!19;UBERON:0003101!8.35e-08!22;UBERON:0000079!8.35e-08!22;UBERON:0002110!1.04e-07!3;UBERON:0006242!1.04e-07!3;UBERON:0003937!5.60e-07!12;UBERON:0005399!5.60e-07!12;UBERON:0000998!9.67e-07!1;UBERON:0006868!9.67e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.26e-34;22!UBERON:0000160;1.27e-32;17!UBERON:0002108;1.56e-30;4!UBERON:0004921;9.15e-22;33!UBERON:0000998;1.33e-17;1!UBERON:0006868;1.33e-17;1!UBERON:0000059;5.91e-14;11!UBERON:0001555;6.25e-10;54!UBERON:0006955;7.98e-10;2!UBERON:0004801;7.98e-10;2!UBERON:0000922;1.66e-08;49!UBERON:0001155;3.42e-08;9!UBERON:0002114;6.50e-07;2!UBERON:0006947;9.91e-07;3!UBERON:0004054;9.91e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.31e-32,17;UBERON:0005409,1.33e-30,25;UBERON:0002108,1.73e-30,4;UBERON:0000998,1.44e-17,1;UBERON:0006868,1.44e-17,1;UBERON:0000059,5.78e-14,11;UBERON:0006955,7.98e-10,2;UBERON:0004801,7.98e-10,2;UBERON:0001155,3.42e-08,9;UBERON:0002114,6.50e-07,2 | |||
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|short_description=p1@RFX6 | |short_description=p1@RFX6 | ||
}} | }} |
Latest revision as of 01:36, 20 September 2015
Short description: | p1@RFX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RFX6_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | 0bp_to_ENST00000332958_5end |
EntrezGene: | RFX6 |
HGNC: | 21478 |
UniProt: | Q8HWS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 7.98e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.31e-32 | 17 |
gastrointestinal system | 1.33e-30 | 25 |
small intestine | 1.73e-30 | 4 |
seminal vesicle | 1.44e-17 | 1 |
seminal fluid secreting gland | 1.44e-17 | 1 |
large intestine | 5.78e-14 | 11 |
uterine epithelium | 7.98e-10 | 2 |
cervix epithelium | 7.98e-10 | 2 |
colon | 3.42e-08 | 9 |
duodenum | 6.50e-07 | 2 |