FFCP PHASE1:Hg19::chr11:72493645..72493661,-: Difference between revisions
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|id=chr11:72493645..72493661,-
|short_description=p23@STARD10
|description=CAGE_peak_23_at_STARD10_5end
|association_with_transcript=-71bp_to_ENST00000536290_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10809 | |EntrezGene=10809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10666 | |HGNC=10666 | ||
|TSSclassifier=strong | |||
|UniProt=F5H5A8 | |UniProt=F5H5A8 | ||
|association_with_transcript=-71bp_to_ENST00000536290_5end | |||
|cluster_id=chr11:72493645..72493661,- | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_23_at_STARD10_5end | |||
|id=chr11:72493645..72493661,- | |||
|ontology_enrichment_celltype=CL:0002553!3.41e-11!1 | |||
|ontology_enrichment_celltype_v019=CL:0000123;4.52e-50;2!CL:0000242;4.52e-50;2!CL:0002327;5.56e-26;4!CL:0000312;5.15e-21;5!CL:0000240;9.07e-18;6!CL:0000311;9.07e-18;6!CL:0000079;9.07e-18;6!CL:0000237;9.07e-18;6!CL:0000362;2.45e-12;9!CL:0002159;2.00e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.52e-50,2;CL:0002327,5.56e-26,4;CL:0000312,5.15e-21,5;CL:0000240,9.07e-18,6;CL:0000311,9.07e-18,6;CL:0000079,9.07e-18,6;CL:0000237,9.07e-18,6;CL:0000036,9.07e-18,6;CL:0000357,9.07e-18,6;CL:0000114,9.07e-18,6;CL:0000362,2.45e-12,9;CL:0002159,2.00e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0008425;9.37e-99;1!CL:0000357;9.07e-18;6!CL:0000114;9.07e-18;6 | |||
|ontology_enrichment_disease=DOID:5093!1.35e-22!4;DOID:1612!1.35e-22!4;DOID:305!1.24e-07!106;DOID:3119!8.87e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:5093;5.56e-26;4!DOID:1612;5.56e-26;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,5.56e-26,4;DOID:1612,5.56e-26,4 | |||
|ontology_enrichment_uberon=UBERON:0001736!6.14e-11!1;UBERON:0006298!6.14e-11!1;UBERON:0000310!2.23e-09!10;UBERON:0001443!1.44e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;5.56e-26;4!UBERON:0000310;2.73e-11;10!UBERON:0001443;2.16e-10;11!UBERON:0001003;5.93e-08;15!UBERON:0007376;5.93e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,5.56e-26,4;UBERON:0005333,5.56e-26,4;UBERON:0008425,5.56e-26,4;UBERON:0005311,5.56e-26,4;UBERON:0000076,9.39e-14,8;UBERON:0000310,2.73e-11,10;UBERON:0001443,2.16e-10,11;UBERON:0001003,5.93e-08,15;UBERON:0007376,5.93e-08,15;UBERON:0007383,5.93e-08,15 | |||
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|short_description=p23@STARD10 | |||
}} | }} |
Latest revision as of 01:51, 20 September 2015
Short description: | p23@STARD10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_STARD10_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | -71bp_to_ENST00000536290_5end |
EntrezGene: | STARD10 |
HGNC: | 10666 |
UniProt: | F5H5A8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.52e-50 | 2 |
mammary gland epithelial cell | 5.56e-26 | 4 |
keratinocyte | 5.15e-21 | 5 |
stratified squamous epithelial cell | 9.07e-18 | 6 |
keratin accumulating cell | 9.07e-18 | 6 |
stratified epithelial cell | 9.07e-18 | 6 |
keratinizing barrier epithelial cell | 9.07e-18 | 6 |
epithelial fate stem cell | 9.07e-18 | 6 |
stratified epithelial stem cell | 9.07e-18 | 6 |
surface ectodermal cell | 9.07e-18 | 6 |
epidermal cell | 2.45e-12 | 9 |
general ecto-epithelial cell | 2.00e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 5.56e-26 | 4 |
mammary bud | 5.56e-26 | 4 |
mammary ridge | 5.56e-26 | 4 |
mammary placode | 5.56e-26 | 4 |
external ectoderm | 9.39e-14 | 8 |
breast | 2.73e-11 | 10 |
chest | 2.16e-10 | 11 |
skin epidermis | 5.93e-08 | 15 |
outer epithelium | 5.93e-08 | 15 |
enveloping layer of ectoderm | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.56e-26 | 4 |
breast cancer | 5.56e-26 | 4 |