FFCP PHASE1:Hg19::chr9:112542198..112542290,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=445815,114299 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33529,15845 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y2D5,Q8IXS6 | |||
|association_with_transcript=-286bp_to_NM_007203,NM_053016,NM_147150,uc004beh.3,uc004bei.2,uc004bej.3,uc004bek.3_5end | |||
|cluster_id=chr9:112542198..112542290,+ | |||
|coexpression_cluster_id=C4788 | |||
|description=CAGE_peak_2_at_PALM2_5end,CAGE_peak_6_at_PALM2-AKAP2_5end | |||
|id=chr9:112542198..112542290,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.49e-25!180;CL:0000057!7.70e-10!75;CL:0000325!4.41e-09!39;CL:0000136!6.36e-08!15;CL:0000680!1.39e-07!57;CL:0000056!1.39e-07!57;CL:0000355!1.39e-07!57;CL:0000133!5.84e-07!59;CL:0000187!6.63e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000136;9.33e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.56e-10,76;CL:0000136,1.01e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.43e-14!365;UBERON:0000486!2.65e-10!82;UBERON:0004290!6.90e-10!70;UBERON:0000914!1.14e-09!83;UBERON:0002329!1.14e-09!83;UBERON:0003077!1.14e-09!83;UBERON:0003059!1.14e-09!83;UBERON:0007282!1.14e-09!83;UBERON:0009618!1.14e-09!83;UBERON:0007285!1.14e-09!83;UBERON:0000119!7.52e-09!312;UBERON:0002199!7.76e-09!45;UBERON:0002416!7.76e-09!45;UBERON:0005256!1.20e-08!143;UBERON:0000483!3.35e-08!309;UBERON:0002100!4.69e-08!216;UBERON:0001134!6.95e-08!61;UBERON:0002036!6.95e-08!61;UBERON:0003082!6.95e-08!61;UBERON:0000481!7.72e-08!347;UBERON:0002097!8.06e-08!40;UBERON:0000468!9.40e-08!659;UBERON:0002385!1.41e-07!63;UBERON:0001015!1.41e-07!63;UBERON:0000383!1.41e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;8.50e-07;25!UBERON:0002385;9.32e-07;31!UBERON:0001015;9.32e-07;31!UBERON:0000383;9.32e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,3.33e-09,83;UBERON:0002329,5.03e-09,71;UBERON:0003059,5.03e-09,71;UBERON:0007282,5.03e-09,71;UBERON:0004290,5.03e-09,71;UBERON:0009618,5.03e-09,71;UBERON:0002199,7.75e-09,46;UBERON:0002416,7.75e-09,46;UBERON:0007524,1.15e-08,73;UBERON:0003077,1.19e-08,72;UBERON:0007285,1.19e-08,72;UBERON:0005256,7.59e-08,122;UBERON:0002097,1.23e-07,41;UBERON:0007503,2.07e-07,78;UBERON:0001134,5.80e-07,62;UBERON:0002036,5.80e-07,62;UBERON:0003082,5.80e-07,62 | |||
|phase1_expression=7.44881355009282,10.7050261945492,13.8135316014052,10.007329835313,9.83314407740033,11.3404008133048,0,10.7392378482561,4.96252693579693,3.44027511102112,0,1.31064823278103,1.05506791291381,0,0.331397375727916,4.03395087871065,2.41077811209591,4.38186054232424,0.487932798790507,2.95490539384291,2.44800829493104,2.82109249330279,0.85870796139317,0.821246550437305,1.75759695432724,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.02290049474824,0.722878304769133,5.0133791063589,0.869079113764942,7.15757352345989,8.27279279514481,3.11964896641424,5.09977614163897,4.21606971327005,1.96468613246569,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,5.4666914686485,3.16576279161449,6.48804985984772,1.72101972449288,1.06400514659507,0,2.1349799145941,3.45334567784024,2.17847724779836,1.21239604862719,1.14423332179421,1.05950199351452,0.576175924479999,0.937285727335186,1.87296046098192,2.85235910772225,2.98897361103602,4.11020745253177,5.17993421978021,4.07307339436521,0.816616685019573,1.22834317311768,0.929932030581889,0,3.4617370098998,2.73048408581408,2.87447256726495,2.86171393721913,1.87677779807946,1.38532057742091,2.63386572528503,1.83892677479412,6.30999847407706,2.1552114800404,3.58779271377724,2.56268866582281,5.51022943014861,3.00091096084402,1.54578793857658,5.15281080091258,5.3973888336161,2.53164498361899,2.24105111870757,4.03894038790583,4.41839513483037,0.646584227275248,2.84007674013291,2.01504196455281,2.7129694769678,1.93260853163297,3.00020732649918,2.58124135850103,2.43947412259191,1.19276791489337,2.20768491452085,2.17688215532278,1.26160425437814,1.45990943630332,3.12899064659632,7.71889125831462,1.38134921352481,2.3218396401599,1.44375896333917,1.53798840051797,1.18009283054671,0.964044119533928,1.21323370005633,0.653638332277218,1.66089433377768,1.07865046528132,1.96221465125346,1.15424147083917,0,2.80483547606892,2.4694440679884,2.94017422771084,5.07020139287323,20.6393715502301,9.45263850690247,0,0,3.94605963686609,2.41450627898976,2.24803506515239,0.402115889646523,0.740707561268237,1.3032332212413,1.03993478527958,2.88662684050547,1.507095264676,4.22671299248958,0,0,0,0,0,0,0,0,0,2.18376766658517,1.70130116690864,4.11969204433102,0.871901815541886,2.30029607499127,0,0,0,0,0,3.80987365753014,5.72982638337417,2.34434894420094,11.9750712215894,4.62723717164956,3.30377363628309,1.42913216315289,3.47606361470618,6.5394010324992,4.47363543507795,4.00742318849111,0,10.988935783228,6.64845291462176,3.12022310734098,1.28603687131071,0,0.799266537048298,0.57191197463259,0,2.46972101034231,6.5147236858747,0.710783897485092,0,1.80863626235752,0.871533458600294,2.29937879718731,0,0,0,6.46987109827273,1.14861935834114,1.42636905040718,3.4747513600219,2.05476322550383,5.55088986043676,0,0,0,0,1.77866236955724,1.30139853857622,0,1.17261385734044,1.91381625495949,0,0,0,0.24538298343828,1.00034104211935,1.08506009479894,5.8231841228626,2.85486382075459,4.41566762095017,2.45996971484698,3.31040709700491,4.5481500811197,1.03473071292505,0.664225598535437,4.24049087645917,2.25897397617015,0.783204629850962,3.43143423810856,0,0,0,0.303127571446259,3.32870879020994,1.20956117331872,8.43566546583841,11.6631099698927,7.29716245525991,7.81648810459776,10.2341449813341,6.75586468803151,5.93672265779964,7.24785560872481,3.55123450626254,2.38168752440047,0.519254429183621,2.90525946149898,0,3.00759705454927,3.86740153530765,1.14814448164607,1.45672934405374,1.31124414959424,0.902399225814824,1.5403067420883,0.784349769176855,0,2.63879072232189,0,0,2.59099099322567,0,0.812839312631559,1.00337954770971,0,0,1.56712328305525,0,0,1.02580050046556,0.984043937099117,2.60302715731442,4.73988653579522,16.2077952728468,14.5216719860235,3.44559322797703,3.25030123018261,1.6068392984416,4.54352375972973,3.23502095940753,3.22357716924872,9.09721378397902,2.36324538710202,4.64053420525531,4.68746450788555,7.47869099432594,1.98341898433174,2.88285101047659,4.21121951232128,4.55210013849975,2.78907329578371,5.98143458978216,3.485186350803,1.54016790088044,2.66153015158511,3.47973196830029,4.633105477598,3.43499728180779,2.232950216158,1.2655176988749,0.38126038784765,2.04718233049067,0.855877976067841,2.22742273548156,0.78494864019923,4.31693898199955,2.47083326762449,4.12343408209902,2.02182481573316,0,2.94880919367287,0.48763373908959,2.43713489631284,2.11300293513511,0.545999645631943,1.1312434556297,1.13008116620243,1.10273068709225,1.99031692572366,3.06915619677634,2.31510213706675,1.9676842561399,5.68149055495571,2.16876448669825,1.97186921772569,2.29458163526482,0.785992328104969,4.280052617775,0.354761064070598,0.844430541190656,1.97576935775941,0.379473173765715,1.04980416073495,0.962221127255121,0.670302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| |||
|short_description=p2@PALM2,p6@PALM2-AKAP2 | |||
}} |
Latest revision as of 02:29, 20 September 2015
Short description: | p2@PALM2, p6@PALM2-AKAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PALM2_5end, CAGE_peak_6_at_PALM2-AKAP2_5end |
Coexpression cluster: | C4788_mature_Adipocyte_heart_Hepatocyte_skeletal_mesodermal_Preadipocyte |
Association with transcript: | -286bp_to_NM_007203, NM_053016, NM_147150, uc004beh.3, uc004bei.2, uc004bej.3, uc004bek.3_5end |
EntrezGene: | 445815,114299 |
HGNC: | 15845&submit=Submit 33529, 15845 |
UniProt: | Q9Y2D5Q8IXS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.56e-10 | 76 |
fat cell | 1.01e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 3.33e-09 | 83 |
somite | 5.03e-09 | 71 |
presomitic mesoderm | 5.03e-09 | 71 |
presumptive segmental plate | 5.03e-09 | 71 |
dermomyotome | 5.03e-09 | 71 |
trunk paraxial mesoderm | 5.03e-09 | 71 |
integument | 7.75e-09 | 46 |
integumental system | 7.75e-09 | 46 |
dense mesenchyme tissue | 1.15e-08 | 73 |
paraxial mesoderm | 1.19e-08 | 72 |
presumptive paraxial mesoderm | 1.19e-08 | 72 |
trunk mesenchyme | 7.59e-08 | 122 |
skin of body | 1.23e-07 | 41 |
epithelial vesicle | 2.07e-07 | 78 |
skeletal muscle tissue | 5.80e-07 | 62 |
striated muscle tissue | 5.80e-07 | 62 |
myotome | 5.80e-07 | 62 |