FFCP PHASE1:Hg19::chr11:73020686..73020697,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9828 | |EntrezGene=9828 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=21726 | |HGNC=21726 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PE2 | |UniProt=Q96PE2 | ||
|association_with_transcript=-190bp_to_AB002335_5end | |association_with_transcript=-190bp_to_AB002335_5end | ||
|cluster_id=chr11:73020686..73020697,+ | |||
|description=CAGE_peak_23_at_ARHGEF17_5end | |description=CAGE_peak_23_at_ARHGEF17_5end | ||
|id=chr11:73020686..73020697,+ | |id=chr11:73020686..73020697,+ | ||
|ontology_enrichment_celltype=CL:0000708!1.90e-08!3;CL:0002590!2.73e-08!3;CL:0000064!2.31e-07!3;CL:0005012!2.31e-07!3;CL:0000067!2.31e-07!3;CL:0002304!2.31e-07!3 | |ontology_enrichment_celltype=CL:0000708!1.90e-08!3;CL:0002590!2.73e-08!3;CL:0000064!2.31e-07!3;CL:0005012!2.31e-07!3;CL:0000067!2.31e-07!3;CL:0002304!2.31e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002575;2.85e-45;2!CL:0002590;4.83e-30;3!CL:0000669;3.11e-23;4!CL:0000511;3.67e-23;1!CL:0002625;3.67e-23;1!CL:0000216;3.67e-23;1!CL:0000708;8.63e-09;3!CL:0000346;1.26e-08;3!CL:1000428;1.26e-08;3 | |ontology_enrichment_celltype_v019=CL:0002575;2.85e-45;2!CL:0002590;4.83e-30;3!CL:0000669;3.11e-23;4!CL:0000511;3.67e-23;1!CL:0002625;3.67e-23;1!CL:0000216;3.67e-23;1!CL:0000708;8.63e-09;3!CL:0000346;1.26e-08;3!CL:1000428;1.26e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002575,2.55e-45,2;CL:0002590,4.84e-30,3;CL:0000511,2.10e-23,1;CL:0002625,2.10e-23,1;CL:0000216,2.10e-23,1;CL:0000669,2.94e-23,4;CL:0000708,8.96e-09,3;CL:0000346,1.12e-08,3;CL:1000428,1.12e-08,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p23@ARHGEF17 | |short_description=p23@ARHGEF17 | ||
}} | }} |
Latest revision as of 02:53, 20 September 2015
Short description: | p23@ARHGEF17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_ARHGEF17_5end |
Coexpression cluster: | NA |
Association with transcript: | -190bp_to_AB002335_5end |
EntrezGene: | ARHGEF17 |
HGNC: | 21726 |
UniProt: | Q96PE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 2.55e-45 | 2 |
smooth muscle cell of the brain vasculature | 4.84e-30 | 3 |
androgen binding protein secreting cell | 2.10e-23 | 1 |
seminiferous tubule epithelial cell | 2.10e-23 | 1 |
Sertoli cell | 2.10e-23 | 1 |
pericyte cell | 2.94e-23 | 4 |
leptomeningeal cell | 8.96e-09 | 3 |
hair follicle dermal papilla cell | 1.12e-08 | 3 |
stem cell of epidermis | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 2.10e-23 | 1 |
seminiferous tubule of testis | 2.10e-23 | 1 |
epithelium of male gonad | 2.10e-23 | 1 |
epithelial cord | 2.10e-23 | 1 |
sex cord | 2.10e-23 | 1 |
seminiferous tubule epithelium | 2.10e-23 | 1 |
testis sex cord | 2.10e-23 | 1 |
genital ridge | 2.10e-23 | 1 |
primitive sex cord of indifferent gonad | 2.10e-23 | 1 |
coelomic epithelium | 2.10e-23 | 1 |
brain vasculature | 1.77e-18 | 5 |
epithelium of gonad | 2.07e-12 | 2 |
vasculature of organ | 6.10e-09 | 11 |
blood-cerebrospinal fluid barrier | 8.96e-09 | 3 |
dermal papilla | 1.12e-08 | 3 |
papillary layer of dermis | 1.12e-08 | 3 |
duct of male reproductive system | 7.70e-07 | 4 |