FFCP PHASE1:Hg19::chr5:130581245..130581251,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56990 | |EntrezGene=56990 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18547 | |HGNC=18547 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=59bp_to_ENST00000502840_5end | |association_with_transcript=59bp_to_ENST00000502840_5end | ||
|cluster_id=chr5:130581245..130581251,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_40_at_CDC42SE2_5end | |description=CAGE_peak_40_at_CDC42SE2_5end | ||
|id=chr5:130581245..130581251,+ | |id=chr5:130581245..130581251,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!2.38e-17!8;UBERON:0003135!6.49e-13!11;UBERON:0000991!3.14e-07!21;UBERON:0009196!3.14e-07!21;UBERON:0009117!3.14e-07!21;UBERON:0005564!3.14e-07!21;UBERON:0004176!6.09e-07!22;UBERON:0003101!6.09e-07!22;UBERON:0000079!6.09e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;9.05e-16;17!UBERON:0002108;1.60e-14;4!UBERON:0005409;1.33e-12;22!UBERON:0001871;8.99e-11;6!UBERON:0001155;1.12e-08;9!UBERON:0004921;1.25e-08;33!UBERON:0000059;2.47e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.40e-16,17;UBERON:0002108,1.40e-14,4;UBERON:0005409,2.63e-11,25;UBERON:0001871,9.89e-11,6;UBERON:0001155,1.12e-08,9;UBERON:0000059,2.47e-07,11 | |||
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|short_description=p40@CDC42SE2 | |short_description=p40@CDC42SE2 | ||
}} | }} |
Latest revision as of 03:31, 20 September 2015
Short description: | p40@CDC42SE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_40_at_CDC42SE2_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 59bp_to_ENST00000502840_5end |
EntrezGene: | CDC42SE2 |
HGNC: | 18547 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 8.40e-16 | 17 |
small intestine | 1.40e-14 | 4 |
gastrointestinal system | 2.63e-11 | 25 |
temporal lobe | 9.89e-11 | 6 |
colon | 1.12e-08 | 9 |
large intestine | 2.47e-07 | 11 |