FFCP PHASE1:Hg19::chr15:99789749..99789820,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64927 | |EntrezGene=64927 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25730 | |HGNC=25730 | ||
|TSSclassifier=strong | |||
|UniProt=Q5W5X9 | |UniProt=Q5W5X9 | ||
|association_with_transcript=0bp_to_ENST00000262074,ENST00000394130,ENST00000394132,ENST00000394136,ENST00000490671,ENST00000558078,ENST00000558613,ENST00000560772,ENST00000560860,NM_001040655,NM_001040656,NM_001040657,NM_001040658,NM_001040659,NM_001040660,NM_022905,uc002bur.2,uc002bus.2,uc002but.2,uc002buu.2,uc002buv.2,uc002buw.2,uc002bux.2,uc002buy.2,uc010boq.2_5end | |association_with_transcript=0bp_to_ENST00000262074,ENST00000394130,ENST00000394132,ENST00000394136,ENST00000490671,ENST00000558078,ENST00000558613,ENST00000560772,ENST00000560860,NM_001040655,NM_001040656,NM_001040657,NM_001040658,NM_001040659,NM_001040660,NM_022905,uc002bur.2,uc002bus.2,uc002but.2,uc002buu.2,uc002buv.2,uc002buw.2,uc002bux.2,uc002buy.2,uc010boq.2_5end | ||
|cluster_id=chr15:99789749..99789820,- | |||
|description=CAGE_peak_1_at_TTC23_5end | |description=CAGE_peak_1_at_TTC23_5end | ||
|id=chr15:99789749..99789820,- | |id=chr15:99789749..99789820,- | ||
|ontology_enrichment_celltype=CL:0000055!1.81e-10!180;CL:0000057!1.67e-08!75;CL:0002620!3.63e-07!23 | |ontology_enrichment_celltype=CL:0000055!1.81e-10!180;CL:0000057!1.67e-08!75;CL:0002620!3.63e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.95e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.02e-08,76;CL:0002620,3.44e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.57e-18!659;UBERON:0000475!7.25e-17!365;UBERON:0000467!1.49e-15!625;UBERON:0000480!3.28e-15!626;UBERON:0000062!2.88e-13!511;UBERON:0000481!1.59e-12!347;UBERON:0000922!1.36e-10!612;UBERON:0002050!7.63e-10!605;UBERON:0005423!7.63e-10!605;UBERON:0000923!1.69e-09!604;UBERON:0005291!1.69e-09!604;UBERON:0006598!1.69e-09!604;UBERON:0002532!1.69e-09!604;UBERON:0002100!2.78e-09!216;UBERON:0000477!6.50e-09!286;UBERON:0000119!1.06e-08!312;UBERON:0000483!1.33e-08!309;UBERON:0004111!1.46e-07!241;UBERON:0003104!3.79e-07!238;UBERON:0009142!3.79e-07!238 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,6.44e-08,309;UBERON:0000483,8.04e-08,306;UBERON:0003102,1.88e-07,99;UBERON:0000922,2.01e-07,592;UBERON:0004111,2.66e-07,240;UBERON:0005423,7.18e-07,581;UBERON:0003104,7.47e-07,160;UBERON:0009142,7.47e-07,160 | |||
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| ||
|short_description=p1@TTC23 | |short_description=p1@TTC23 | ||
}} | }} |
Latest revision as of 03:35, 20 September 2015
Short description: | p1@TTC23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TTC23_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000262074, ENST00000394130, ENST00000394132, ENST00000394136, ENST00000490671, ENST00000558078, ENST00000558613, ENST00000560772, ENST00000560860, NM_001040655, NM_001040656, NM_001040657, NM_001040658, NM_001040659, NM_001040660, NM_022905, uc002bur.2, uc002bus.2, uc002but.2, uc002buu.2, uc002buv.2, uc002buw.2, uc002bux.2, uc002buy.2, uc010boq.2_5end |
EntrezGene: | TTC23 |
HGNC: | 25730 |
UniProt: | Q5W5X9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.02e-08 | 76 |
skin fibroblast | 3.44e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
cell layer | 6.44e-08 | 309 |
epithelium | 8.04e-08 | 306 |
surface structure | 1.88e-07 | 99 |
embryo | 2.01e-07 | 592 |
anatomical conduit | 2.66e-07 | 240 |
developing anatomical structure | 7.18e-07 | 581 |
mesenchyme | 7.47e-07 | 160 |
entire embryonic mesenchyme | 7.47e-07 | 160 |