FFCP PHASE1:Hg19::chr3:126236588..126236601,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=131669 | |EntrezGene=131669 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26444 | |HGNC=26444 | ||
|TSSclassifier=strong | |||
|UniProt=E9PE13,Q96N76,Q68CJ7 | |UniProt=E9PE13,Q96N76,Q68CJ7 | ||
|association_with_transcript=0bp_to_ENST00000383579,uc003eiz.1,uc010hsi.1_5end | |association_with_transcript=0bp_to_ENST00000383579,uc003eiz.1,uc010hsi.1_5end | ||
|cluster_id=chr3:126236588..126236601,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_UROC1_5end | |description=CAGE_peak_1_at_UROC1_5end | ||
|id=chr3:126236588..126236601,- | |id=chr3:126236588..126236601,- | ||
|ontology_enrichment_celltype=CL:0000182;1.54e-29;12 | |ontology_enrichment_celltype=CL:0000181!2.07e-39!12;CL:0000417!2.07e-39!12;CL:0000668!2.07e-39!12;CL:0000414!2.07e-39!12;CL:0000412!2.07e-39!12;CL:0000182!2.07e-39!12;CL:0000223!8.22e-08!59 | ||
| | |ontology_enrichment_celltype_v019=CL:0000182;1.54e-29;12 | ||
| | |ontology_enrichment_celltype_v019_2=CL:0000182,1.54e-29,12 | ||
|ontology_enrichment_uberon=UBERON:0002107;2.07e-41;19!UBERON:0006925;2.07e-41;19!UBERON:0002423;1.56e-31;25!UBERON:0002365;1.58e-25;31!UBERON:0002330;1.58e-25;31!UBERON:0002368;2.78e-21;33!UBERON:0000949;2.10e-15;43!UBERON:0005172;1.89e-11;52!UBERON:0005173;1.89e-11;52!UBERON:0002417;2.04e-10;58!UBERON:0000916;2.04e-10;58!UBERON:0002530;4.91e-08;57 | |ontology_enrichment_development_v019=UBERON:0004161;4.25e-32;11!UBERON:0009497;2.97e-27;13!UBERON:0001041;4.34e-12;30!UBERON:0003104;1.32e-11;31 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!6.06e-44!19;UBERON:0006925!6.06e-44!19;UBERON:0008836!6.06e-44!19;UBERON:0005057!3.01e-40!26;UBERON:0008835!7.05e-38!22;UBERON:0003894!7.05e-38!22;UBERON:0009854!3.30e-36!23;UBERON:0007499!2.89e-33!25;UBERON:0009497!2.89e-33!25;UBERON:0000015!2.89e-33!25;UBERON:0002423!2.89e-33!25;UBERON:0006235!2.89e-33!25;UBERON:0004161!2.89e-33!25;UBERON:0009856!5.79e-32!26;UBERON:0002365!1.04e-26!31;UBERON:0002330!1.04e-26!31;UBERON:0002368!1.38e-23!35;UBERON:0005172!1.35e-18!55;UBERON:0005173!1.35e-18!55;UBERON:0000949!3.39e-18!45;UBERON:0002417!1.12e-16!61;UBERON:0000916!1.12e-16!61;UBERON:0003929!4.80e-15!54;UBERON:0002146!2.75e-14!1;UBERON:0005623!2.75e-14!1;UBERON:0002530!1.04e-13!59;UBERON:0001041!5.06e-10!98;UBERON:0005911!1.20e-09!82;UBERON:0005177!4.28e-09!107;UBERON:0009569!1.47e-08!113;UBERON:0002405!2.61e-08!115;UBERON:0003914!3.71e-08!118;UBERON:0000466!1.44e-07!126;UBERON:0000077!2.64e-07!130;UBERON:0004921!2.64e-07!129;UBERON:0004185!2.64e-07!129;UBERON:0001048!9.85e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.07e-41;19!UBERON:0006925;2.07e-41;19!UBERON:0002423;1.56e-31;25!UBERON:0002365;1.58e-25;31!UBERON:0002330;1.58e-25;31!UBERON:0002368;2.78e-21;33!UBERON:0000949;2.10e-15;43!UBERON:0005172;1.89e-11;52!UBERON:0005173;1.89e-11;52!UBERON:0002417;2.04e-10;58!UBERON:0000916;2.04e-10;58!UBERON:0002530;4.91e-08;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.07e-41,19;UBERON:0006925,2.07e-41,19;UBERON:0008836,2.07e-41,19;UBERON:0008835,8.43e-36,22;UBERON:0003894,8.43e-36,22;UBERON:0009854,2.96e-34,23;UBERON:0007499,1.56e-31,25;UBERON:0009497,1.56e-31,25;UBERON:0000015,1.56e-31,25;UBERON:0002423,1.56e-31,25;UBERON:0006235,1.56e-31,25;UBERON:0004161,1.56e-31,25;UBERON:0009856,2.49e-30,26;UBERON:0002365,1.81e-25,31;UBERON:0002330,1.81e-25,31;UBERON:0002368,1.41e-22,35;UBERON:0000949,1.38e-17,45;UBERON:0003929,1.14e-14,54;UBERON:0005172,1.14e-14,54;UBERON:0005173,1.14e-14,54;UBERON:0002530,1.98e-13,59;UBERON:0002417,3.31e-13,60;UBERON:0000916,3.31e-13,60;UBERON:0005911,1.16e-09,82;UBERON:0001041,4.20e-09,87;UBERON:0005177,7.87e-08,101;UBERON:0009569,4.74e-07,112;UBERON:0003914,9.59e-07,117 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,121.684833428958,0,18.3144871071235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.8836602997136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.9421747790682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81599647657131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0,0,2.32991899054908,0.472699093843342,0.412079291905832,1.01105315781277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.8449243988357,31.8016533389331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,121.684833428958,0,18.3144871071235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.8836602997136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.9421747790682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81599647657131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0,0,2.32991899054908,0.472699093843342,0.412079291905832,1.01105315781277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.8449243988357,31.8016533389331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@UROC1 | |short_description=p1@UROC1 | ||
}} | }} |
Latest revision as of 04:22, 20 September 2015
Short description: | p1@UROC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UROC1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000383579, uc003eiz.1, uc010hsi.1_5end |
EntrezGene: | UROC1 |
HGNC: | 26444 |
UniProt: | E9PE13Q96N76Q68CJ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.54e-29 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.07e-41 | 19 |
digestive gland | 2.07e-41 | 19 |
liver bud | 2.07e-41 | 19 |
hepatic diverticulum | 8.43e-36 | 22 |
liver primordium | 8.43e-36 | 22 |
digestive tract diverticulum | 2.96e-34 | 23 |
epithelial sac | 1.56e-31 | 25 |
epithelium of foregut-midgut junction | 1.56e-31 | 25 |
anatomical boundary | 1.56e-31 | 25 |
hepatobiliary system | 1.56e-31 | 25 |
foregut-midgut junction | 1.56e-31 | 25 |
septum transversum | 1.56e-31 | 25 |
sac | 2.49e-30 | 26 |
exocrine gland | 1.81e-25 | 31 |
exocrine system | 1.81e-25 | 31 |
endocrine gland | 1.41e-22 | 35 |
endocrine system | 1.38e-17 | 45 |
gut epithelium | 1.14e-14 | 54 |
abdomen element | 1.14e-14 | 54 |
abdominal segment element | 1.14e-14 | 54 |
gland | 1.98e-13 | 59 |
abdominal segment of trunk | 3.31e-13 | 60 |
abdomen | 3.31e-13 | 60 |
endo-epithelium | 1.16e-09 | 82 |
foregut | 4.20e-09 | 87 |
trunk region element | 7.87e-08 | 101 |
subdivision of trunk | 4.74e-07 | 112 |
epithelial tube | 9.59e-07 | 117 |