FFCP PHASE1:Hg19::chr17:39197699..39197703,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81851 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16772 | |||
|TSSclassifier=strong | |||
|UniProt=Q07627,Q8IUG1 | |||
|association_with_transcript=9bp_to_ENST00000306271,NM_030967,uc002hvw.1_5end | |||
|cluster_id=chr17:39197699..39197703,- | |||
|description=CAGE_peak_1_at_KRTAP1-1_5end | |||
|id=chr17:39197699..39197703,- | |||
|ontology_enrichment_celltype=CL:0002620!9.25e-23!23;CL:0000057!2.43e-20!75;CL:0000055!1.04e-13!180;CL:0002334!4.96e-10!12;CL:0000515!5.09e-10!4;CL:0000048!6.83e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000056;6.30e-23;4!CL:0002620;7.15e-18;23!CL:0000515;1.79e-17;3!CL:0000680;3.61e-13;7!CL:0002556;5.07e-09;6!CL:0002582;3.00e-08;3!CL:0000057;2.12e-07;73!CL:0000228;3.51e-07;1!CL:0002372;3.51e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,7.90e-23,4;CL:0000057,3.27e-19,76;CL:0002620,8.44e-18,23;CL:0002556,5.43e-09,6;CL:0002582,2.64e-08,3;CL:0000228,3.52e-07,1;CL:0002372,3.52e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000515;6.30e-23;4 | |||
|ontology_enrichment_disease=DOID:17!6.90e-11!5;DOID:450!6.90e-11!5;DOID:66!6.90e-11!5;DOID:423!6.90e-11!5;DOID:0080000!6.90e-11!5;DOID:11722!6.90e-11!5 | |||
|ontology_enrichment_disease_v019=DOID:17;2.07e-10;5!DOID:450;2.07e-10;5!DOID:66;2.07e-10;5!DOID:423;2.07e-10;5!DOID:0080000;2.07e-10;5!DOID:11722;2.07e-10;5!DOID:4235;4.69e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.10e-10,5;DOID:450,2.10e-10,5;DOID:66,2.10e-10,5;DOID:423,2.10e-10,5;DOID:0080000,2.10e-10,5;DOID:11722,2.10e-10,5;DOID:4235,4.18e-07,1;DOID:2513,9.79e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!2.40e-17!45;UBERON:0002416!2.40e-17!45;UBERON:0002097!2.10e-16!40;UBERON:0003102!6.32e-14!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.30e-18;41!UBERON:0002199;4.08e-13;46!UBERON:0002416;4.08e-13;46!UBERON:0003102;8.07e-10;50!UBERON:0001758;5.07e-09;6!UBERON:0003672;5.07e-09;6!UBERON:0001134;1.60e-08;16!UBERON:0002036;1.60e-08;16!UBERON:0003129;8.59e-08;7!UBERON:0007029;3.13e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,5.50e-20,41;UBERON:0002199,1.61e-17,46;UBERON:0002416,1.61e-17,46;UBERON:0003102,2.55e-12,99;UBERON:0001758,5.43e-09,6;UBERON:0003672,5.43e-09,6;UBERON:0003129,9.11e-08,7;UBERON:0007029,3.13e-07,1 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19168262731897,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448346041655403,0.117434498643765,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,5.70670907145089,20.8411701143333,1.20190447125277,0,1.25572744982203,0.213557388818567,0.635795703478686,2.70081986475962,3.09157587715317,4.12224864073007,10.9808945235638,4.05063197379039,2.43592512902997,1.00973509697646,0.828449087780694,0.161646056818812,0.355009592516614,1.61203357164224,0.339121184620975,0,0,0,0,0,0,0,0,0,3.12899064659632,0,0,0,2.16563844500876,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,8.5582143024431,2.31650090668127,6.78071864416265,2.32779252211864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.713715955188647,0,0.585707074963566,0,0,0,0.664225598535437,1.84369168541703,0.695068915744663,0,0,0,0,0,0,0,0,2.72918588600655,0,0.561320188866147,0.128139149255701,0,0.160853921143607,0,0.925258162815933,0.710246901252508,4.10635780069046,0,1.74315567689939,0,0.200506470303285,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0.435050081742686,0,0,0,0,0,0,0.929691098594572,0.94443704049192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.682499557039929,0,0,0,0.66343897524122,0.876901770507525,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,1.86623752597084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0.25426853765475,0,4.32110745600634,0.326587360109409,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0,1.51522404220071,1.76097531226803,0.889811221596536,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0.363697318405119,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62216589314576,0,0,0,1.18284868973636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51149313853035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.098150233615243,0,0,0,0,13.5999078056559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92788632594669,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,1.11598505450025,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@KRTAP1-1 | |||
}} |
Latest revision as of 04:29, 20 September 2015
Short description: | p1@KRTAP1-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRTAP1-1_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000306271, NM_030967, uc002hvw.1_5end |
EntrezGene: | KRTAP1-1 |
HGNC: | 16772 |
UniProt: | Q07627Q8IUG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 7.90e-23 | 4 |
fibroblast | 3.27e-19 | 76 |
skin fibroblast | 8.44e-18 | 23 |
fibroblast of periodontium | 5.43e-09 | 6 |
visceral preadipocyte | 2.64e-08 | 3 |
multinucleate cell | 3.52e-07 | 1 |
myotube | 3.52e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
skin of body | 5.50e-20 | 41 |
integument | 1.61e-17 | 46 |
integumental system | 1.61e-17 | 46 |
surface structure | 2.55e-12 | 99 |
periodontium | 5.43e-09 | 6 |
dentition | 5.43e-09 | 6 |
skull | 9.11e-08 | 7 |
surface | 3.13e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.10e-10 | 5 |
myotonic disease | 2.10e-10 | 5 |
muscle tissue disease | 2.10e-10 | 5 |
myopathy | 2.10e-10 | 5 |
muscular disease | 2.10e-10 | 5 |
myotonic dystrophy | 2.10e-10 | 5 |
spindle cell sarcoma | 4.18e-07 | 1 |
basal cell carcinoma | 9.79e-07 | 1 |