FFCP PHASE1:Hg19::chr11:73882213..73882239,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26005 | |EntrezGene=26005 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24564 | |HGNC=24564 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000542930_5end | |association_with_transcript=0bp_to_ENST00000542930_5end | ||
|cluster_id=chr11:73882213..73882239,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_C2CD3_5end | |description=CAGE_peak_4_at_C2CD3_5end | ||
|id=chr11:73882213..73882239,- | |id=chr11:73882213..73882239,- | ||
|ontology_enrichment_celltype=CL:0000766!1.46e-12!76;CL:0000763!6.28e-12!112;CL:0000049!6.28e-12!112;CL:0000037!1.09e-10!172;CL:0000566!1.09e-10!172;CL:0000738!1.26e-10!140;CL:0002032!1.61e-10!165;CL:0000837!1.61e-10!165;CL:0000839!4.49e-10!70;CL:0000860!7.18e-10!45;CL:0002057!2.72e-09!42;CL:0000988!7.84e-09!182;CL:0002194!1.46e-08!63;CL:0000576!1.46e-08!63;CL:0000040!1.46e-08!63;CL:0000559!1.46e-08!63;CL:0000557!1.78e-08!71;CL:0002009!2.15e-08!65;CL:0002031!3.98e-08!124;CL:0002087!1.39e-07!119 | |ontology_enrichment_celltype=CL:0000766!1.46e-12!76;CL:0000763!6.28e-12!112;CL:0000049!6.28e-12!112;CL:0000037!1.09e-10!172;CL:0000566!1.09e-10!172;CL:0000738!1.26e-10!140;CL:0002032!1.61e-10!165;CL:0000837!1.61e-10!165;CL:0000839!4.49e-10!70;CL:0000860!7.18e-10!45;CL:0002057!2.72e-09!42;CL:0000988!7.84e-09!182;CL:0002194!1.46e-08!63;CL:0000576!1.46e-08!63;CL:0000040!1.46e-08!63;CL:0000559!1.46e-08!63;CL:0000557!1.78e-08!71;CL:0002009!2.15e-08!65;CL:0002031!3.98e-08!124;CL:0002087!1.39e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000094;9.16e-08;8!CL:0000473;2.26e-07;39!CL:0000234;2.26e-07;39!CL:0000860;5.02e-07;33!CL:0002057;5.02e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.21e-12,72;CL:0000738,3.83e-11,136;CL:0000473,4.68e-11,48;CL:0000234,4.68e-11,48;CL:0000763,2.43e-10,108;CL:0000049,2.43e-10,108;CL:0000860,5.60e-10,42;CL:0002057,5.60e-10,42;CL:0000037,1.03e-09,168;CL:0002032,1.28e-09,161;CL:0000837,1.28e-09,161;CL:0000839,3.07e-09,66;CL:0000988,2.46e-08,177;CL:0002031,3.31e-08,120;CL:0000557,5.09e-08,67;CL:0002009,8.50e-08,61;CL:0002194,1.16e-07,59;CL:0000576,1.16e-07,59;CL:0000040,1.16e-07,59;CL:0000559,1.16e-07,59;CL:0000094,1.72e-07,8;CL:0002087,2.08e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;5.36e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.37e-09!112;UBERON:0007023!1.82e-09!115;UBERON:0002390!4.07e-09!102;UBERON:0003061!4.07e-09!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.59e-09,98;UBERON:0003061,2.59e-09,98;UBERON:0002193,3.05e-09,108 | |||
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| ||
|short_description=p4@C2CD3 | |short_description=p4@C2CD3 | ||
}} | }} |
Latest revision as of 04:42, 20 September 2015
Short description: | p4@C2CD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C2CD3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000542930_5end |
EntrezGene: | C2CD3 |
HGNC: | 24564 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.21e-12 | 72 |
leukocyte | 3.83e-11 | 136 |
defensive cell | 4.68e-11 | 48 |
phagocyte | 4.68e-11 | 48 |
myeloid cell | 2.43e-10 | 108 |
common myeloid progenitor | 2.43e-10 | 108 |
classical monocyte | 5.60e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.60e-10 | 42 |
hematopoietic stem cell | 1.03e-09 | 168 |
hematopoietic oligopotent progenitor cell | 1.28e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.28e-09 | 161 |
myeloid lineage restricted progenitor cell | 3.07e-09 | 66 |
hematopoietic cell | 2.46e-08 | 177 |
hematopoietic lineage restricted progenitor cell | 3.31e-08 | 120 |
granulocyte monocyte progenitor cell | 5.09e-08 | 67 |
macrophage dendritic cell progenitor | 8.50e-08 | 61 |
monopoietic cell | 1.16e-07 | 59 |
monocyte | 1.16e-07 | 59 |
monoblast | 1.16e-07 | 59 |
promonocyte | 1.16e-07 | 59 |
granulocyte | 1.72e-07 | 8 |
nongranular leukocyte | 2.08e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.59e-09 | 98 |
blood island | 2.59e-09 | 98 |
hemolymphoid system | 3.05e-09 | 108 |