FFCP PHASE1:Hg19::chr3:126675836..126675847,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84303 | |EntrezGene=84303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28184 | |HGNC=28184 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000510044_5end | |association_with_transcript=-5bp_to_ENST00000510044_5end | ||
|cluster_id=chr3:126675836..126675847,+ | |||
|coexpression_cluster_id=C1500 | |coexpression_cluster_id=C1500 | ||
|description=CAGE_peak_5_at_CHCHD6_5end | |description=CAGE_peak_5_at_CHCHD6_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000148!1.07e-29!10;CL:0000541!1.07e-29!10;CL:0000147!5.59e-21!14;CL:0002619!6.54e-20!3;CL:0002567!1.90e-19!3;CL:0000710!1.99e-14!20;CL:0002274!1.00e-11!5;CL:0000457!1.00e-11!5;CL:0002191!1.00e-11!5;CL:0000097!1.00e-11!5;CL:0000831!1.00e-11!5;CL:0002028!1.00e-11!5;CL:0000075!1.85e-10!27;CL:0000235!3.27e-10!10;CL:0002077!2.14e-08!33;CL:0002566!1.83e-07!1;CL:0000839!4.65e-07!70;CL:0000325!5.72e-07!39;CL:0000557!6.15e-07!71 | |ontology_enrichment_celltype=CL:0000148!1.07e-29!10;CL:0000541!1.07e-29!10;CL:0000147!5.59e-21!14;CL:0002619!6.54e-20!3;CL:0002567!1.90e-19!3;CL:0000710!1.99e-14!20;CL:0002274!1.00e-11!5;CL:0000457!1.00e-11!5;CL:0002191!1.00e-11!5;CL:0000097!1.00e-11!5;CL:0000831!1.00e-11!5;CL:0002028!1.00e-11!5;CL:0000075!1.85e-10!27;CL:0000235!3.27e-10!10;CL:0002077!2.14e-08!33;CL:0002566!1.83e-07!1;CL:0000839!4.65e-07!70;CL:0000325!5.72e-07!39;CL:0000557!6.15e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002619;2.55e-43;3!CL:0000148;4.20e-23;10!CL:0002567;4.88e-20;3!CL:0000147;1.30e-16;14!CL:0000710;1.01e-11;20!CL:0000235;1.12e-10;6!CL:0000075;9.51e-09;27 | |ontology_enrichment_celltype_v019=CL:0002619;2.55e-43;3!CL:0000148;4.20e-23;10!CL:0002567;4.88e-20;3!CL:0000147;1.30e-16;14!CL:0000710;1.01e-11;20!CL:0000235;1.12e-10;6!CL:0000075;9.51e-09;27 | ||
|ontology_enrichment_celltype_v019_2=CL:0002619,2.21e-43,3;CL:0000148,4.45e-23,10;CL:0000541,4.45e-23,10;CL:0002567,5.37e-20,3;CL:0000147,1.36e-16,14;CL:0000710,1.04e-11,20;CL:0000235,1.12e-10,6;CL:0000075,9.70e-09,27;CL:0000839,1.95e-07,66;CL:0000557,2.53e-07,67;CL:0002077,5.54e-07,34;CL:0000766,8.49e-07,72 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1909!1.82e-13!2 | |ontology_enrichment_disease=DOID:1909!1.82e-13!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;2.67e-08;2 | |ontology_enrichment_disease_v019=DOID:1909;2.67e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,2.48e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002038!3.40e-07!1;UBERON:0009661!3.40e-07!1 | |ontology_enrichment_uberon=UBERON:0002038!3.40e-07!1;UBERON:0009661!3.40e-07!1 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p5@CHCHD6 | |short_description=p5@CHCHD6 | ||
}} | }} |
Latest revision as of 04:46, 20 September 2015
Short description: | p5@CHCHD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CHCHD6_5end |
Coexpression cluster: | C1500_Melanocyte_Monocytederived_CD14_melanoma_retina_Macrophage_Mast |
Association with transcript: | -5bp_to_ENST00000510044_5end |
EntrezGene: | CHCHD6 |
HGNC: | 28184 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 2.21e-43 | 3 |
melanocyte | 4.45e-23 | 10 |
melanoblast | 4.45e-23 | 10 |
light melanocyte | 5.37e-20 | 3 |
pigment cell | 1.36e-16 | 14 |
neurecto-epithelial cell | 1.04e-11 | 20 |
macrophage | 1.12e-10 | 6 |
columnar/cuboidal epithelial cell | 9.70e-09 | 27 |
myeloid lineage restricted progenitor cell | 1.95e-07 | 66 |
granulocyte monocyte progenitor cell | 2.53e-07 | 67 |
ecto-epithelial cell | 5.54e-07 | 34 |
myeloid leukocyte | 8.49e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.48e-08 | 2 |