FFCP PHASE1:Hg19::chr9:114423841..114423900,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2790 | |EntrezGene=2790 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4402 | |HGNC=4402 | ||
|TSSclassifier=strong | |||
|UniProt=P50151 | |UniProt=P50151 | ||
|association_with_transcript=0bp_to_NM_001017998,NM_001198664,uc004bfp.2,uc011lws.1_5end | |association_with_transcript=0bp_to_NM_001017998,NM_001198664,uc004bfp.2,uc011lws.1_5end | ||
|cluster_id=chr9:114423841..114423900,+ | |||
|coexpression_cluster_id=C344 | |coexpression_cluster_id=C344 | ||
|description=CAGE_peak_1_at_GNG10_5end | |description=CAGE_peak_1_at_GNG10_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002009!5.93e-14!65;CL:0000766!2.85e-13!76;CL:0002194!4.59e-13!63;CL:0000576!4.59e-13!63;CL:0000040!4.59e-13!63;CL:0000559!4.59e-13!63;CL:0000557!3.59e-12!71;CL:0000839!1.64e-11!70;CL:0002057!1.23e-10!42;CL:0000860!4.56e-09!45;CL:0000048!7.25e-07!430;CL:0000003!8.21e-07!722 | |ontology_enrichment_celltype=CL:0002009!5.93e-14!65;CL:0000766!2.85e-13!76;CL:0002194!4.59e-13!63;CL:0000576!4.59e-13!63;CL:0000040!4.59e-13!63;CL:0000559!4.59e-13!63;CL:0000557!3.59e-12!71;CL:0000839!1.64e-11!70;CL:0002057!1.23e-10!42;CL:0000860!4.56e-09!45;CL:0000048!7.25e-07!430;CL:0000003!8.21e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.03e-10;39!CL:0000234;2.03e-10;39!CL:0000860;2.85e-09;33!CL:0002057;2.85e-09;33!CL:0000576;3.71e-08;48 | |ontology_enrichment_celltype_v019=CL:0000473;2.03e-10;39!CL:0000234;2.03e-10;39!CL:0000860;2.85e-09;33!CL:0002057;2.85e-09;33!CL:0000576;3.71e-08;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0002009,2.04e-15,61;CL:0000766,1.65e-14,72;CL:0002194,1.74e-14,59;CL:0000576,1.74e-14,59;CL:0000040,1.74e-14,59;CL:0000559,1.74e-14,59;CL:0000473,1.86e-13,48;CL:0000234,1.86e-13,48;CL:0000557,2.18e-13,67;CL:0000839,1.09e-12,66;CL:0000860,1.23e-10,42;CL:0002057,1.23e-10,42;CL:0000048,4.49e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;4.62e-08;42 | |ontology_enrichment_development_v019=CL:0002057;4.62e-08;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!8.57e-14!101;UBERON:0001434!8.57e-14!101;UBERON:0002371!4.16e-12!80;UBERON:0002204!7.62e-12!167;UBERON:0001474!8.21e-12!86;UBERON:0002390!1.83e-09!102;UBERON:0003061!1.83e-09!102;UBERON:0002193!5.43e-09!112 | |ontology_enrichment_uberon=UBERON:0004765!8.57e-14!101;UBERON:0001434!8.57e-14!101;UBERON:0002371!4.16e-12!80;UBERON:0002204!7.62e-12!167;UBERON:0001474!8.21e-12!86;UBERON:0002390!1.83e-09!102;UBERON:0003061!1.83e-09!102;UBERON:0002193!5.43e-09!112 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001434,2.47e-15,100;UBERON:0004765,1.38e-14,90;UBERON:0002371,3.29e-13,76;UBERON:0001474,7.84e-13,82;UBERON:0002204,1.34e-12,167;UBERON:0002390,3.26e-10,98;UBERON:0003061,3.26e-10,98;UBERON:0002193,1.15e-09,108;UBERON:0002405,3.41e-09,93;UBERON:0000926,9.44e-08,315;UBERON:0004120,9.44e-08,315;UBERON:0006603,9.44e-08,315 | |||
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| ||
|short_description=p1@GNG10 | |short_description=p1@GNG10 | ||
}} | }} |
Latest revision as of 05:02, 20 September 2015
Short description: | p1@GNG10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GNG10_5end |
Coexpression cluster: | C344_Neutrophils_CD14_Eosinophils_Whole_blood_CD14CD16_gall |
Association with transcript: | 0bp_to_NM_001017998, NM_001198664, uc004bfp.2, uc011lws.1_5end |
EntrezGene: | GNG10 |
HGNC: | 4402 |
UniProt: | P50151 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 2.04e-15 | 61 |
myeloid leukocyte | 1.65e-14 | 72 |
monopoietic cell | 1.74e-14 | 59 |
monocyte | 1.74e-14 | 59 |
monoblast | 1.74e-14 | 59 |
promonocyte | 1.74e-14 | 59 |
defensive cell | 1.86e-13 | 48 |
phagocyte | 1.86e-13 | 48 |
granulocyte monocyte progenitor cell | 2.18e-13 | 67 |
myeloid lineage restricted progenitor cell | 1.09e-12 | 66 |
classical monocyte | 1.23e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.23e-10 | 42 |
multi fate stem cell | 4.49e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
skeletal system | 2.47e-15 | 100 |
skeletal element | 1.38e-14 | 90 |
bone marrow | 3.29e-13 | 76 |
bone element | 7.84e-13 | 82 |
musculoskeletal system | 1.34e-12 | 167 |
hematopoietic system | 3.26e-10 | 98 |
blood island | 3.26e-10 | 98 |
hemolymphoid system | 1.15e-09 | 108 |
immune system | 3.41e-09 | 93 |
mesoderm | 9.44e-08 | 315 |
mesoderm-derived structure | 9.44e-08 | 315 |
presumptive mesoderm | 9.44e-08 | 315 |