FFCP PHASE2:Hg19::chr20:1472029..1472032,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:284759 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:16247 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=284759 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=16247 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q5JXA8 | ||
|association_with_transcript=0bp_to_ENST00000381630_5end | |association_with_transcript=0bp_to_ENST00000381630_5end | ||
|cluster_id=chr20:1472029..1472032,- | |cluster_id=chr20:1472029..1472032,- | ||
Latest revision as of 05:13, 20 September 2015
| Short description: | p5@SIRPB2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_SIRPB2_5end |
| Coexpression cluster: | C299_CD14CD16_Eosinophils_Neutrophils_CD14_Whole_Basophils_blood |
| Association with transcript: | 0bp_to_ENST00000381630_5end |
| EntrezGene: | SIRPB2 |
| HGNC: | 16247 |
| UniProt: | Q5JXA8 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@SIRPB2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| myeloid leukocyte | 2.65e-75 | 72 |
| classical monocyte | 2.22e-69 | 42 |
| CD14-positive, CD16-negative classical monocyte | 2.22e-69 | 42 |
| defensive cell | 1.93e-65 | 48 |
| phagocyte | 1.93e-65 | 48 |
| monopoietic cell | 1.16e-55 | 59 |
| monocyte | 1.16e-55 | 59 |
| monoblast | 1.16e-55 | 59 |
| promonocyte | 1.16e-55 | 59 |
| macrophage dendritic cell progenitor | 1.08e-53 | 61 |
Showing 1 to 10 of 36 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 2.39e-43 | 98 |
| blood island | 2.39e-43 | 98 |
| bone marrow | 3.59e-42 | 76 |
| hemolymphoid system | 8.00e-39 | 108 |
| bone element | 9.99e-39 | 82 |
| skeletal element | 7.69e-35 | 90 |
| immune system | 1.49e-33 | 93 |
| skeletal system | 7.57e-31 | 100 |
| lateral plate mesoderm | 6.35e-18 | 203 |
| musculoskeletal system | 2.39e-16 | 167 |
Showing 1 to 10 of 14 entries
