FFCP PHASE1:Hg19::chr3:127454947..127454961,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11343 | |EntrezGene=11343 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17038 | |HGNC=17038 | ||
|TSSclassifier=strong | |||
|UniProt=E7EWX8 | |UniProt=E7EWX8 | ||
|association_with_transcript=238bp_to_ENST00000398101,uc003ejv.2_5end | |association_with_transcript=238bp_to_ENST00000398101,uc003ejv.2_5end | ||
|cluster_id=chr3:127454947..127454961,- | |||
|coexpression_cluster_id=C2717 | |coexpression_cluster_id=C2717 | ||
|description=CAGE_peak_16_at_MGLL_5end | |description=CAGE_peak_16_at_MGLL_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000738!1.81e-30!140;CL:0002087!1.06e-26!119;CL:0000037!5.90e-24!172;CL:0000566!5.90e-24!172;CL:0002031!1.45e-23!124;CL:0000988!2.94e-23!182;CL:0002009!3.94e-20!65;CL:0000451!4.55e-20!10;CL:0002032!4.68e-20!165;CL:0000837!4.68e-20!165;CL:0002194!3.81e-19!63;CL:0000576!3.81e-19!63;CL:0000040!3.81e-19!63;CL:0000559!3.81e-19!63;CL:0000945!1.28e-18!24;CL:0000826!1.28e-18!24;CL:0000557!6.80e-18!71;CL:0000839!1.26e-16!70;CL:0000766!7.71e-15!76;CL:0000990!9.21e-15!8;CL:0000763!3.21e-12!112;CL:0000049!3.21e-12!112;CL:0002619!3.71e-10!3;CL:0000784!3.94e-10!3;CL:0000817!1.27e-09!3;CL:0000453!2.49e-09!5;CL:0000860!9.39e-09!45;CL:0002057!3.10e-08!42;CL:0000542!5.62e-08!53;CL:0000051!5.62e-08!53;CL:0000134!7.30e-08!358;CL:0000840!8.84e-08!5;CL:0001029!8.84e-08!5;CL:0002320!1.70e-07!365;CL:0000785!4.89e-07!2;CL:0000955!4.89e-07!2;CL:0000818!4.89e-07!2;CL:0000954!4.89e-07!2;CL:0000816!4.89e-07!2;CL:0000838!6.69e-07!52 | |ontology_enrichment_celltype=CL:0000738!1.81e-30!140;CL:0002087!1.06e-26!119;CL:0000037!5.90e-24!172;CL:0000566!5.90e-24!172;CL:0002031!1.45e-23!124;CL:0000988!2.94e-23!182;CL:0002009!3.94e-20!65;CL:0000451!4.55e-20!10;CL:0002032!4.68e-20!165;CL:0000837!4.68e-20!165;CL:0002194!3.81e-19!63;CL:0000576!3.81e-19!63;CL:0000040!3.81e-19!63;CL:0000559!3.81e-19!63;CL:0000945!1.28e-18!24;CL:0000826!1.28e-18!24;CL:0000557!6.80e-18!71;CL:0000839!1.26e-16!70;CL:0000766!7.71e-15!76;CL:0000990!9.21e-15!8;CL:0000763!3.21e-12!112;CL:0000049!3.21e-12!112;CL:0002619!3.71e-10!3;CL:0000784!3.94e-10!3;CL:0000817!1.27e-09!3;CL:0000453!2.49e-09!5;CL:0000860!9.39e-09!45;CL:0002057!3.10e-08!42;CL:0000542!5.62e-08!53;CL:0000051!5.62e-08!53;CL:0000134!7.30e-08!358;CL:0000840!8.84e-08!5;CL:0001029!8.84e-08!5;CL:0002320!1.70e-07!365;CL:0000785!4.89e-07!2;CL:0000955!4.89e-07!2;CL:0000818!4.89e-07!2;CL:0000954!4.89e-07!2;CL:0000816!4.89e-07!2;CL:0000838!6.69e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.69e-36;24!CL:0002619;8.60e-28;3!CL:0000784;1.18e-27;3!CL:0000451;2.59e-13;10!CL:0000946;3.29e-10;1!CL:0000786;3.29e-10;1!CL:0000542;4.09e-09;53!CL:0000235;7.98e-07;6 | |ontology_enrichment_celltype_v019=CL:0000945;1.69e-36;24!CL:0002619;8.60e-28;3!CL:0000784;1.18e-27;3!CL:0000451;2.59e-13;10!CL:0000946;3.29e-10;1!CL:0000786;3.29e-10;1!CL:0000542;4.09e-09;53!CL:0000235;7.98e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.16e-36,24;CL:0000826,2.16e-36,24;CL:0002619,6.24e-28,3;CL:0000784,7.50e-28,3;CL:0000738,1.65e-23,136;CL:0002087,7.06e-20,115;CL:0000542,3.83e-19,53;CL:0000051,3.83e-19,53;CL:0000037,1.73e-18,168;CL:0000988,2.12e-17,177;CL:0002031,1.55e-16,120;CL:0000838,5.04e-16,52;CL:0002032,2.81e-15,161;CL:0000837,2.81e-15,161;CL:0000451,2.21e-13,10;CL:0000946,3.01e-10,1;CL:0000786,3.01e-10,1;CL:0000980,3.01e-10,1;CL:0000134,3.93e-07,354;CL:0002320,6.26e-07,361;CL:0000235,8.22e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000051;4.09e-09;53 | |ontology_enrichment_development_v019=CL:0000051;4.09e-09;53 | ||
|ontology_enrichment_disease=DOID:0060058!2.55e-10!10 | |ontology_enrichment_disease=DOID:0060058!2.55e-10!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;7.46e-15;10!DOID:12603;6.73e-11;1!DOID:630;9.83e-11;1!DOID:0050177;9.83e-11;1!DOID:0050427;9.83e-11;1!DOID:4960;3.29e-10;1!DOID:0070004;3.29e-10;1!DOID:2355;3.29e-10;1 | |ontology_enrichment_disease_v019=DOID:0060058;7.46e-15;10!DOID:12603;6.73e-11;1!DOID:630;9.83e-11;1!DOID:0050177;9.83e-11;1!DOID:0050427;9.83e-11;1!DOID:4960;3.29e-10;1!DOID:0070004;3.29e-10;1!DOID:2355;3.29e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,8.31e-15,10;DOID:12603,6.73e-11,1;DOID:630,9.84e-11,1;DOID:0050177,9.84e-11,1;DOID:0050427,9.84e-11,1;DOID:2355,3.61e-10,1;DOID:4960,4.33e-10,1;DOID:0070004,4.33e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.11e-19!102;UBERON:0003061!1.11e-19!102;UBERON:0002405!2.77e-19!115;UBERON:0002193!1.42e-18!112;UBERON:0002371!2.84e-18!80;UBERON:0001474!6.31e-18!86;UBERON:0004765!3.26e-14!101;UBERON:0001434!3.26e-14!101;UBERON:0002106!5.46e-10!3;UBERON:0004854!5.46e-10!3;UBERON:0009034!5.46e-10!3;UBERON:0002095!5.46e-10!3;UBERON:0004782!5.46e-10!3;UBERON:0003281!5.46e-10!3;UBERON:0009664!5.46e-10!3;UBERON:0002296!5.46e-10!3;UBERON:0005602!5.46e-10!3;UBERON:0001179!5.46e-10!3;UBERON:0006293!5.46e-10!3;UBERON:0002204!2.41e-07!167;UBERON:0002384!5.38e-07!375;UBERON:0004177!5.67e-07!7 | |ontology_enrichment_uberon=UBERON:0002390!1.11e-19!102;UBERON:0003061!1.11e-19!102;UBERON:0002405!2.77e-19!115;UBERON:0002193!1.42e-18!112;UBERON:0002371!2.84e-18!80;UBERON:0001474!6.31e-18!86;UBERON:0004765!3.26e-14!101;UBERON:0001434!3.26e-14!101;UBERON:0002106!5.46e-10!3;UBERON:0004854!5.46e-10!3;UBERON:0009034!5.46e-10!3;UBERON:0002095!5.46e-10!3;UBERON:0004782!5.46e-10!3;UBERON:0003281!5.46e-10!3;UBERON:0009664!5.46e-10!3;UBERON:0002296!5.46e-10!3;UBERON:0005602!5.46e-10!3;UBERON:0001179!5.46e-10!3;UBERON:0006293!5.46e-10!3;UBERON:0002204!2.41e-07!167;UBERON:0002384!5.38e-07!375;UBERON:0004177!5.67e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;3.57e-13;3!UBERON:0004177;2.94e-08;5!UBERON:0005057;2.94e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0002106;3.57e-13;3!UBERON:0004177;2.94e-08;5!UBERON:0005057;2.94e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.79e-13,3;UBERON:0004854,3.79e-13,3;UBERON:0009034,3.79e-13,3;UBERON:0002095,3.79e-13,3;UBERON:0004782,3.79e-13,3;UBERON:0003281,3.79e-13,3;UBERON:0009664,3.79e-13,3;UBERON:0002296,3.79e-13,3;UBERON:0005602,3.79e-13,3;UBERON:0001179,3.79e-13,3;UBERON:0006293,3.79e-13,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,5.57817861960044,8.53846130279436,8.57947516319104,0,0,0,0,0,0,2.09161441566814,2.27470771979874,0.293600439334847,0,0,0,4.70222495903841,1.6194683300949,2.57575567634187,0.145398238779565,0.377875943688809,0,0,0.411167888021826,0.619412741790207,0,0.256160706529101,0.236482229888585,0,0,0,0.376484679085209,0.545812300115692,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0,0,0,0,0.422510572623884,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0.324547393654683,0.348259474598534,0,1.19245312152671,2.85997455390064,2.97166001063652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.5803175125719,0.432807638929335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80030741298171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0.387956065953678,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,1.1007533168552,0,0,0,0,0,0.2249738915515,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.265729680626726,1.14495775979091,0,0.245772908753719,0,0,0,1.03328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.437119121007915,0,0,0,0,0,0,0,1.03382309777839,0.644578879735772,8.79482172139375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.186224142887574,0,0.0636471582781649,0,0,0,0.404112318087525,0.358611026963382,0,0,0,0,0,0,0.122241444182866,0,0,0,7.37307532297436 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,5.57817861960044,8.53846130279436,8.57947516319104,0,0,0,0,0,0,2.09161441566814,2.27470771979874,0.293600439334847,0,0,0,4.70222495903841,1.6194683300949,2.57575567634187,0.145398238779565,0.377875943688809,0,0,0.411167888021826,0.619412741790207,0,0.256160706529101,0.236482229888585,0,0,0,0.376484679085209,0.545812300115692,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0,0,0,0,0.422510572623884,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0.324547393654683,0.348259474598534,0,1.19245312152671,2.85997455390064,2.97166001063652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.5803175125719,0.432807638929335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80030741298171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0.387956065953678,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,1.1007533168552,0,0,0,0,0,0.2249738915515,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.265729680626726,1.14495775979091,0,0.245772908753719,0,0,0,1.03328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.437119121007915,0,0,0,0,0,0,0,1.03382309777839,0.644578879735772,8.79482172139375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.186224142887574,0,0.0636471582781649,0,0,0,0.404112318087525,0.358611026963382,0,0,0,0,0,0,0.122241444182866,0,0,0,7.37307532297436 | ||
|short_description=p16@MGLL | |short_description=p16@MGLL | ||
}} | }} |
Latest revision as of 05:36, 20 September 2015
Short description: | p16@MGLL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_MGLL_5end |
Coexpression cluster: | C2717_acute_B_xeroderma_b_splenic_plasma_Dendritic |
Association with transcript: | 238bp_to_ENST00000398101, uc003ejv.2_5end |
EntrezGene: | MGLL |
HGNC: | 17038 |
UniProt: | E7EWX8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.16e-36 | 24 |
pro-B cell | 2.16e-36 | 24 |
adult endothelial progenitor cell | 6.24e-28 | 3 |
plasmacytoid dendritic cell | 7.50e-28 | 3 |
leukocyte | 1.65e-23 | 136 |
nongranular leukocyte | 7.06e-20 | 115 |
lymphocyte | 3.83e-19 | 53 |
common lymphoid progenitor | 3.83e-19 | 53 |
hematopoietic stem cell | 1.73e-18 | 168 |
hematopoietic cell | 2.12e-17 | 177 |
hematopoietic lineage restricted progenitor cell | 1.55e-16 | 120 |
lymphoid lineage restricted progenitor cell | 5.04e-16 | 52 |
hematopoietic oligopotent progenitor cell | 2.81e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.81e-15 | 161 |
dendritic cell | 2.21e-13 | 10 |
antibody secreting cell | 3.01e-10 | 1 |
plasma cell | 3.01e-10 | 1 |
plasmablast | 3.01e-10 | 1 |
mesenchymal cell | 3.93e-07 | 354 |
connective tissue cell | 6.26e-07 | 361 |
macrophage | 8.22e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.79e-13 | 3 |
gastrointestinal system mesentery | 3.79e-13 | 3 |
stomach region | 3.79e-13 | 3 |
mesentery | 3.79e-13 | 3 |
gastrointestinal system serosa | 3.79e-13 | 3 |
mesentery of stomach | 3.79e-13 | 3 |
gut mesentery | 3.79e-13 | 3 |
dorsal mesentery | 3.79e-13 | 3 |
dorsal mesogastrium | 3.79e-13 | 3 |
peritoneal cavity | 3.79e-13 | 3 |
spleen primordium | 3.79e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 8.31e-15 | 10 |
acute leukemia | 6.73e-11 | 1 |
genetic disease | 9.84e-11 | 1 |
monogenic disease | 9.84e-11 | 1 |
xeroderma pigmentosum | 9.84e-11 | 1 |
anemia | 3.61e-10 | 1 |
bone marrow cancer | 4.33e-10 | 1 |
myeloma | 4.33e-10 | 1 |