FFCP PHASE1:Hg19::chr1:207038965..207038969,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=50604 | |EntrezGene=50604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6002 | |HGNC=6002 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NYY1 | |UniProt=Q9NYY1 | ||
|association_with_transcript=-184bp_to_ENST00000367096,NM_018724,uc001her.2_5end | |||
|cluster_id=chr1:207038965..207038969,+ | |||
|coexpression_cluster_id=C262 | |||
|description=CAGE_peak_1_at_IL20_5end | |||
|id=chr1:207038965..207038969,+ | |||
|ontology_enrichment_celltype=CL:0002159!9.30e-36!13;CL:0000362!2.12e-30!8;CL:0002621!3.88e-29!3;CL:0000317!1.14e-20!2;CL:1000448!1.14e-20!2;CL:0002308!1.14e-20!2;CL:0002140!1.14e-20!2;CL:0000312!3.95e-18!5;CL:0002077!1.03e-17!33;CL:0000240!3.29e-15!6;CL:0000311!3.29e-15!6;CL:0000079!3.29e-15!6;CL:0000237!3.29e-15!6;CL:0000036!3.29e-15!6;CL:0000357!3.29e-15!6;CL:0000114!3.29e-15!6;CL:0000622!8.03e-09!5;CL:0000154!1.73e-07!6;CL:0000221!1.82e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000317;5.22e-79;2!CL:1000448;5.22e-79;2!CL:0002308;5.22e-79;2!CL:0002140;5.22e-79;2!CL:0000362;6.49e-40;9!CL:0000622;1.99e-32;5!CL:0000154;3.11e-27;6!CL:0002159;4.86e-26;14!CL:0000150;1.48e-18;9!CL:0002077;2.29e-11;34!CL:0000312;3.49e-09;5!CL:0000240;7.25e-08;6!CL:0000311;7.25e-08;6!CL:0000079;7.25e-08;6!CL:0000237;7.25e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,5.22e-79,2;CL:1000448,5.22e-79,2;CL:0002308,5.22e-79,2;CL:0002140,5.22e-79,2;CL:0000362,6.49e-40,9;CL:0000622,1.99e-32,5;CL:0000154,3.11e-27,6;CL:0002159,4.86e-26,14;CL:0000150,1.48e-18,9;CL:0002077,2.96e-11,34;CL:0000312,3.49e-09,5;CL:0000240,7.25e-08,6;CL:0000311,7.25e-08,6;CL:0000079,7.25e-08,6;CL:0000237,7.25e-08,6;CL:0000036,7.25e-08,6;CL:0000357,7.25e-08,6;CL:0000114,7.25e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0005754;9.91e-41;1!UBERON:0007297;3.81e-21;2!CL:0000357;7.25e-08;6!CL:0000114;7.25e-08;6 | |||
|ontology_enrichment_disease=DOID:5093!1.33e-10!4;DOID:1612!1.33e-10!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.53e-11;4!DOID:1612;2.53e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.53e-11,4;DOID:1612,2.53e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0001949!3.88e-29!3;UBERON:0002419!1.14e-20!2;UBERON:0007771!1.14e-20!2;UBERON:0003297!1.14e-20!2;UBERON:0001821!1.14e-20!2;UBERON:0003487!1.14e-20!2;UBERON:0001820!1.14e-20!2;UBERON:0005089!1.14e-20!2;UBERON:0005088!1.14e-20!2;UBERON:0001003!2.33e-17!14;UBERON:0007376!2.33e-17!14;UBERON:0007383!2.33e-17!14;UBERON:0001828!2.57e-11!8;UBERON:0000998!2.79e-11!1;UBERON:0006868!2.79e-11!1;UBERON:0003102!1.58e-10!95;UBERON:0002118!2.24e-08!5;UBERON:0004532!2.24e-08!5;UBERON:0002097!2.38e-08!40;UBERON:0002199!2.28e-07!45;UBERON:0002416!2.28e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;5.22e-79;2!UBERON:0007771;5.22e-79;2!UBERON:0003297;5.22e-79;2!UBERON:0001821;5.22e-79;2!UBERON:0003487;5.22e-79;2!UBERON:0001820;5.22e-79;2!UBERON:0000998;9.91e-41;1!UBERON:0006868;9.91e-41;1!UBERON:0001003;2.27e-24;15!UBERON:0007376;2.27e-24;15!UBERON:0006947;1.40e-14;3!UBERON:0004054;1.40e-14;3!UBERON:0010371;5.25e-12;31!UBERON:0005904;2.80e-11;4!UBERON:0002097;1.10e-08;41!UBERON:0002199;9.11e-07;46!UBERON:0002416;9.11e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,5.22e-79,2;UBERON:0007771,5.22e-79,2;UBERON:0003297,5.22e-79,2;UBERON:0001821,5.22e-79,2;UBERON:0003487,5.22e-79,2;UBERON:0001820,5.22e-79,2;UBERON:0005089,5.22e-79,2;UBERON:0005088,5.22e-79,2;UBERON:0000998,9.91e-41,1;UBERON:0006868,9.91e-41,1;UBERON:0001003,2.27e-24,15;UBERON:0007376,2.27e-24,15;UBERON:0007383,2.27e-24,15;UBERON:0006947,1.40e-14,3;UBERON:0004054,1.40e-14,3;UBERON:0005904,2.80e-11,4;UBERON:0002097,1.80e-09,41;UBERON:0002199,1.59e-08,46;UBERON:0002416,1.59e-08,46;UBERON:0002530,7.84e-07,59 | |||
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|short_description=p1@IL20 | |||
}} | }} |
Latest revision as of 06:03, 20 September 2015
Short description: | p1@IL20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IL20_5end |
Coexpression cluster: | C262_breast_MCF7_skeletal_Reticulocytes_mucinous_hepatoblastoma_Wilms |
Association with transcript: | -184bp_to_ENST00000367096, NM_018724, uc001her.2_5end |
EntrezGene: | IL20 |
HGNC: | 6002 |
UniProt: | Q9NYY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 5.22e-79 | 2 |
epithelial cell of sweat gland | 5.22e-79 | 2 |
epithelial cell of skin gland | 5.22e-79 | 2 |
acinar cell of sebaceous gland | 5.22e-79 | 2 |
epidermal cell | 6.49e-40 | 9 |
acinar cell | 1.99e-32 | 5 |
protein secreting cell | 3.11e-27 | 6 |
general ecto-epithelial cell | 4.86e-26 | 14 |
glandular epithelial cell | 1.48e-18 | 9 |
ecto-epithelial cell | 2.96e-11 | 34 |
keratinocyte | 3.49e-09 | 5 |
stratified squamous epithelial cell | 7.25e-08 | 6 |
keratin accumulating cell | 7.25e-08 | 6 |
stratified epithelial cell | 7.25e-08 | 6 |
keratinizing barrier epithelial cell | 7.25e-08 | 6 |
epithelial fate stem cell | 7.25e-08 | 6 |
stratified epithelial stem cell | 7.25e-08 | 6 |
surface ectodermal cell | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
skin gland | 5.22e-79 | 2 |
epidermis gland | 5.22e-79 | 2 |
gland of integumental system | 5.22e-79 | 2 |
sebaceous gland | 5.22e-79 | 2 |
skin sebaceous gland | 5.22e-79 | 2 |
sweat gland | 5.22e-79 | 2 |
sweat gland placode | 5.22e-79 | 2 |
sebaceous gland placode | 5.22e-79 | 2 |
seminal vesicle | 9.91e-41 | 1 |
seminal fluid secreting gland | 9.91e-41 | 1 |
skin epidermis | 2.27e-24 | 15 |
outer epithelium | 2.27e-24 | 15 |
enveloping layer of ectoderm | 2.27e-24 | 15 |
male genital duct | 1.40e-14 | 3 |
internal male genitalia | 1.40e-14 | 3 |
duct of male reproductive system | 2.80e-11 | 4 |
skin of body | 1.80e-09 | 41 |
integument | 1.59e-08 | 46 |
integumental system | 1.59e-08 | 46 |
gland | 7.84e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.53e-11 | 4 |
breast cancer | 2.53e-11 | 4 |