FFCP PHASE1:Hg19::chr22:38302126..38302174,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85377 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29804 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N3F8 | |||
|association_with_transcript=0bp_to_NM_033386_5end | |||
|cluster_id=chr22:38302126..38302174,+ | |||
|description=CAGE_peak_2_at_MICALL1_5end | |||
|id=chr22:38302126..38302174,+ | |||
|ontology_enrichment_celltype=CL:0000220!1.03e-25!246;CL:0002321!6.96e-25!248;CL:0000222!8.46e-14!119;CL:0000055!8.87e-14!180;CL:0000066!1.86e-12!254;CL:0000076!1.34e-11!62;CL:0000213!2.13e-11!57;CL:0000215!2.13e-11!57;CL:0002078!1.34e-08!44;CL:0000221!1.46e-08!71;CL:0000144!3.53e-08!625;CL:0000115!1.43e-07!35;CL:0002139!5.70e-07!24;CL:0000057!5.92e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000213;3.71e-07;58!CL:0000215;3.71e-07;58!CL:0002139;4.43e-07;24!CL:0000115;7.85e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.27e-25,250;CL:0000222,2.00e-14,121;CL:0000066,3.68e-12,253;CL:0000213,9.25e-12,58;CL:0000215,9.25e-12,58;CL:0000076,2.69e-11,63;CL:0002078,5.99e-09,45;CL:0000221,2.29e-08,72;CL:0000115,6.36e-08,36;CL:0002139,5.67e-07,24;CL:0000057,8.07e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!4.10e-10!312;UBERON:0000467!6.90e-10!625;UBERON:0002049!9.80e-10!79;UBERON:0007798!9.80e-10!79;UBERON:0000480!1.22e-09!626;UBERON:0000468!1.75e-09!659;UBERON:0000483!2.03e-09!309;UBERON:0000475!1.06e-08!365;UBERON:0000055!1.15e-08!69;UBERON:0004872!6.16e-08!84;UBERON:0001981!1.66e-07!60;UBERON:0007500!1.66e-07!60;UBERON:0004537!1.66e-07!60;UBERON:0006965!1.66e-07!60;UBERON:0002050!2.47e-07!605;UBERON:0005423!2.47e-07!605;UBERON:0000923!3.40e-07!604;UBERON:0005291!3.40e-07!604;UBERON:0006598!3.40e-07!604;UBERON:0002532!3.40e-07!604;UBERON:0000486!5.57e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,2.41e-10,309;UBERON:0002049,6.38e-10,78;UBERON:0007798,6.38e-10,78;UBERON:0000483,1.22e-09,306;UBERON:0000055,7.46e-09,68;UBERON:0004872,4.66e-08,83;UBERON:0007500,1.09e-07,59;UBERON:0001981,1.09e-07,59;UBERON:0004537,1.09e-07,59;UBERON:0006965,1.09e-07,59;UBERON:0000486,3.18e-07,83 | |||
|phase1_expression=5.63202975738726,7.27941781229343,6.3429481843187,8.00586386825043,2.23480547213644,6.97870819280295,7.59899634504932,12.0026775951098,7.57438321779532,16.4641737456011,20.9340350391728,27.3051715162715,27.9592996922161,4.20805600064159,7.29074226601415,5.3786011716142,7.23233433628772,8.03341099426111,7.3189919818576,12.9277110980627,15.7080532258075,24.1360135538128,7.72837165253853,11.0868284309036,19.3335664975996,2.8272960126742,2.8735206307481,2.20390187678302,2.36018566109342,2.68680578668049,3.09632246632152,20.2272669385364,24.3976794210383,39.9334330980131,0.774672005803016,0.995184627411951,3.81680571135301,2.21598163412751,2.4065333696417,2.60413044859022,0.895661896959697,1.29557466407592,0.515151135268373,3.78035420826868,6.80176698639857,3.39617685662943,5.57829688573643,6.57868620834921,6.50383378879718,2.58923153089935,2.56160706529101,2.60130452877444,2.06847408441971,5.16387746867061,2.70852973188684,3.9530891303947,4.36649840092553,2.69668181334102,4.59125838556354,4.49300637906531,3.83602275479425,2.96866170168044,2.99195486432448,2.13112375266347,6.38460324982885,6.80862269629368,12.4564449799115,2.00998932205395,3.65038042894141,2.38907729175628,5.44859552370032,8.47038562771399,6.0127853613768,1.05627643155971,0.850417199860174,2.30624510059213,0.561643155732475,0.750884464207532,0.16072558669708,1.71007646244749,1.39241674039363,1.64397738388171,0,0,0.889509253863555,1.70692089026603,1.60158394814405,0,1.32208974556972,0.954053754535364,1.1384259382189,2.34894875748376,1.52909291250092,1.32171328579026,3.92355994087075,0.526768169550154,0.786839080455332,1.17903228824749,1.64481199199607,2.67498392625085,0.977766799900771,1.89379122293893,3.89653456815823,0.891283655081389,0.589211814949674,0.664601683750863,0.812411591295047,2.0494611156108,1.95089021339817,2.79544437826249,3.03985019564433,2.02862160014537,1.33457906845854,1.07016331235885,0,2.94604291013672,0.766440987203842,1.71813722741315,1.51811815211702,0.95569624297229,0.651083453856419,0.950452044448374,0.903450714466637,1.91979916731628,0,1.65744076430812,0.821127996921047,2.62088766192152,5.34880391567015,3.18613688542158,4.87613732627923,4.02420515822182,4.73091478821062,9.75885711438329,8.02140657017423,6.80778639115871,6.36228757640879,7.78615792484217,6.52290238432068,10.4212816807405,9.57399164055074,5.89405839739707,26.5935560453556,15.9437310397305,0.649094787309367,0.696518949197069,2.26028532882071,4.5313218618015,3.43196946468077,2.97166001063652,14.7084181451362,9.46258054616737,13.8856200643038,14.1326985481002,20.9749718104953,13.7559020970034,18.6005520217761,7.23566925674121,11.7402866686614,8.03329470635209,15.3075140501476,17.4862584315258,17.0843440283719,9.19157700864672,17.012980905517,7.59047690414678,8.75664553242062,8.1080265947992,15.3316637465883,22.7823758296351,13.0073238190589,0,0,24.4212669199819,13.9152146474689,7.47120018821021,11.1223711883104,10.0392817262085,6.73869926176878,14.0169400035577,16.0123493594557,11.5933747756065,6.22422070799533,10.6421430935054,8.66348086501331,7.26515652695671,4.03323147135999,32.5706790248977,8.74048215124897,11.409436430889,8.66802347200446,11.1562773711577,14.8923108818681,11.0956137294776,4.08308342509786,7.86139630795315,11.1591843669827,5.94001428641027,11.8688126053707,20.0235499626366,20.8399261126709,7.57512512793298,8.75829639103749,6.92660288710457,7.90159717585508,10.7270728529657,8.11285518095623,8.16711718752151,14.1717812194201,12.1727711626583,9.74886745333984,8.70264178644767,5.97704669582946,11.8514648420989,7.258557396932,8.27004027982204,7.1129013767675,10.8546522924969,9.29703976287223,10.6686397500416,6.39017266529906,9.16844093871526,12.7170444232866,15.4608682530637,14.4555443913142,16.0610573417842,2.80539524098069,1.59035721985782,1.85910308591229,5.18305275076852,2.27088765788066,1.45990943630332,7.8224766164908,23.7999147131368,15.1948413487729,8.8229906326076,4.33127689001751,1.77460200059766,2.86593973132773,3.13314338848527,2.64705534557745,3.26819166138609,4.03360052488864,1.8876383142423,1.96221465125346,1.15424147083917,19.1920418202409,32.2556079747925,11.5240723172792,16.1709582524096,0,0.982827216677626,2.36315962672562,2.6487785964879,1.8448265781467,6.17644117074692,30.8398301998238,46.084718835624,14.3756430548632,7.77742939331649,22.1549647611021,5.19967392639789,7.21656710126366,3.36198174427723,5.4007999348478,15.3028434626738,15.2785219150282,11.6055032863105,1.58040879591855,0.858486162094873,2.70838706696137,2.10603838625314,4.45893486866185,7.49870671894216,11.5907668457213,11.0584575849061,39.0475158984419,24.1226168966588,57.1240191956165,0,1.93706554829097,0.829312462163088,0.720599767084807,1.2624243342638,6.41328732350907,16.0435138734477,18.7547915536075,23.9501424431787,9.76861180681573,20.1229848755425,12.2905366031149,21.9776925316907,11.7709218584986,19.141292599268,8.66120495577111,35.7656445851882,6.762422020448,8.51001973071586,11.4408180602503,10.2882949704857,2.83698264046557,13.8539533088372,4.14636181608628,5.96883765930587,4.93944202068461,6.84045987016844,1.77695974371273,3.95975936466715,15.9762869841581,7.84380112740265,25.2931667690604,1.2162378064119,2.00902836572851,8.43335757932127,23.0039861271919,28.7154839585285,12.8373214536647,4.92256442669769,9.24643451476725,8.0577433457953,1.56919201590938,5.12279976525011,5.60631694634745,6.28880877770767,8.13102797511883,13.0139853857622,11.5993321916654,8.87836206272048,12.1208362814101,0,0,0,4.04881922673162,6.5022167737758,9.49427582949075,15.3898437532797,13.5606031485843,10.8814666373415,15.8140910240163,9.02838299183157,9.09630016223939,14.4862299809507,6.64225598535437,12.5371034608358,5.99496939829772,19.9717180611995,16.8140277667319,2.06768026122887,0.862856803274467,4.05564719653088,53.3504525745417,86.5464285454585,87.995575358937,9.6762045049323,7.98002261097925,8.13914273855913,12.0450800300359,5.11707249066703,10.6163587954781,10.3892646511494,11.5657270351992,5.14929003408069,10.2658945017261,9.8658341544888,10.8075651967762,2.05461064305758,16.8425435054759,71.8231713699991,6.7740524417118,9.83292307236272,6.03172308813351,16.2431860646668,8.31765640727679,35.2957396129585,10.2297457257282,6.33309773357254,19.3346752920524,17.0093705276516,8.63663664408557,58.6063560223099,8.12839312631558,12.5422443463713,7.13653564526107,8.31076008928724,19.7009784155517,0.219259876645935,0.522870902049801,21.2853603846603,29.1933034672738,27.0064067571372,4.22468147755661,10.7136273837462,9.40608299094703,21.2478249058584,25.3523495954243,14.4615536859744,19.817497249885,9.55101426110795,10.2847462066507,11.0269257987624,2.47066563197029,5.075584286998,14.4885266607372,17.3612469511138,13.0575083135173,13.4533047155574,8.80527716212631,33.1797521206204,3.253918845081,6.61105928344344,9.7585217822484,20.946283451974,7.98459045475533,8.69932992075073,5.5597265731176,5.29562080945368,5.58237554039501,12.655176988749,8.95961911441977,17.1451520178594,14.5499255931533,15.9101623962968,13.3441268833869,3.77732160924961,4.39259247577688,6.47968212901275,14.1527737101321,14.2659289055707,10.1102029497355,15.1166459117773,12.1856744815642,7.39551027297288,4.50449707646353,3.11091950298168,10.1707304958219,8.82184549673799,9.28814565337708,10.5228212460903,10.4179596168004,3.27947376023316,11.5658914868741,14.2518809125885,13.2396933190153,4.01551786171344,5.40369725572166,10.3434604929563,14.8999646909651,8.86652068250189,15.1475650761555,15.5584001243943,17.1468012920042,21.9386417014167,18.768463715002,25.0449265181042,4.89547764039252,23.2472901242464,16.8471475667626,29.7098202869573,13.7834040124176,1.01489521846434,2.29391162142713,0,0.952927101831156,1.23408681925858,1.29694662238543,1.62009431171434,2.37937552888281,7.47768497892312,70.2610294342252,7.84128691139301,1.85803175125719,1.298422916788,3.20138295067864,6.85532972733936,6.58611925728295,1.91505370132367,1.05836791361941,4.22008522356922,5.05434920604226,3.19528550646469,0.783399478865116,0,5.58662866745291,3.05117342697029,3.8341944366299,0.851692475380653,2.06103206853459,1.22896305723383,1.78940886313933,2.16903884225481,1.75849285861836,4.73290495621912,2.46174797895425,5.13865789104368,9.9921590399346,2.81974010175699,0.935702702041099,6.29985170869144,3.51945513073589,0.445773537109913,3.69376990848337,13.6084356300483,21.9753863816153,4.30024982938925,10.9356241254293,4.07941307590487,4.11842208584752,18.4580339133971,5.06700979507184,9.36465544780028,4.14425873296722,0.251932747854276,10.8404803452284,0.861593638227486,17.729256496723,4.76302261080832,1.61119057208048,2.55786185113436,6.90503839458535,2.3948309234694,5.55684950723184,6.78532922266653,4.45286871176886,19.9613798001194,2.3438498497671,2.53633999988968,5.79999660347835,4.21035758656349,1.01701460117107,2.12748913591143,1.03423011972439,4.95727842751532,11.8064996554639,2.65722415744152,2.65312164975897,0,2.87506075821184,3.54657142744257,2.19385397153973,1.74301541630384,18.96162922189,12.6198423946227,8.65959624437209,15.9089094027761,14.3612231055635,7.60531603454057,10.5270382711533,26.2885093063345,8.52855641629816,0,5.02336820464079,2.6593869104025,0.225595660617181,1.37243774022418,0.671286347903371,1.3282761290693,1.58936578980379,5.90794580678476,2.12202650606892,2.68570835724488,0.865554558968364,19.9052386215701,3.18447232212021,4.27721101453538,2.37216902944498,1.85345908419754,1.56632924258183,17.5916957079567,5.61804353109152,9.60484227473891,0.729819156862664,7.43525551941941,22.3357949171365,5.12959723704208,7.25944296291983,7.95789180239274,5.87635190544938,15.9342824579362,17.0048633891485,22.5982316720443,10.591742588016,20.7195726148769,17.9208644659438,13.3766486634003,20.8012009519708,13.8847790668105,7.25143740866395,12.101229714676,5.06707337901887,8.08334352616598,3.09620260125072,2.0465008784132,2.05288642633023,5.43138492335149,9.35514942929903,3.84167259326905,13.5671505400283,6.75629679790165,3.92526934926448,7.23540116118771,2.32460578729448,10.0322907527496,7.39295555453882,8.93360586355457,10.4228302510983,4.80465994013501,1.58460277786965,3.35481846026668,8.48498524620464,9.78510283730021,9.20505047548532,3.97793048781655,17.0480848041896,10.2071449080664,6.02383667124769,8.94226116468806,6.44648162129936,0.525774708558629,4.18923601908381,3.89572720819862,11.485968393229,10.7826660269455,5.15071257763885,4.68660060627932,6.24806294126554,5.04419836959365,0,1.96957955768059,2.63730746819733,3.1005630172925,12.1065802263141,1.86281330544726,6.36183751847443,6.40156008724405,1.60753148465019,2.88832816854191,1.66176135211674,1.1248694577575,1.5476039091159,4.1917194094037,10.063040627978,1.10327990218877,4.93073128468982,2.85120908602398,1.97216073266129,43.5647497915141,2.85878130549347,1.32418394073086,37.8860121105577,3.80099721227599,2.5926644736038,8.49127136284464,8.38111340937412,6.73158670144579,7.66746098034398,6.45878921664716,1.75862680413699,1.32506888912221,9.95478763983939,6.47939748539181,4.44825778499256,9.16259529011673,5.01900839068165,3.14408610199332,8.28478110694391,2.48083010905975,1.38328142328561,0.730755590285376,35.10876917736,4.35214242695579,4.0110383043632,3.36980134439808,2.95085367638824,1.41348686625211,4.43034089983493,4.27091927156871,3.1297732676625,8.60113793535107,7.76503360757966,15.2757151235803,10.9295421599622,16.1224726271118,5.00442087887438,9.42035600698392,3.76425311517075,2.34167452903441,4.78239394415723,9.85081699053369,10.7508122529723,9.98650550704704,6.43970217935303,13.5846666946391,19.5758468751238,14.8746044458,18.4501726991152,6.372925223894,3.84423389973048,6.6904642208755,15.7431089257262,7.76314784381297,10.3676551960214,7.70940972218185,7.30443086536427,15.0257608997218,23.6099231544653,10.1717683301165,8.18318966411517,11.2781084894613,11.6008439969623,13.1371643270543,20.801443762484,8.24149692438703,11.7862321068072,25.2369796457302,18.1062640582865,19.7286264064932,73.0784017502592,8.61482516946635,4.39892701215285,10.0342048847652,20.2370390422081,13.8960651222437,7.23637363609733,19.0824277621552,11.1890142197131,7.94029471069441,7.6872455576384,14.1626440109791,10.0273785538536,4.70078682915885,1.16916185303633,4.78313425128107,1.96278473107013,6.87980682577466,4.17813944881323,5.28280308396568,2.79982354196902,3.20075189082423,1.72214979660816,8.51273930350254,5.8913904080589,44.062044931625,14.9298542407913,20.3352050372806,6.68513830659427,6.76243549980355,6.22494937694479,8.65635902765529,3.82634856183029,13.3850625399722,18.435282293117,12.0841653248299,0.315446980005013,1.60114149657094,8.46422264857641,3.9811912055916,5.0741087826203,2.8339315265117,3.67157875831448,2.05116364240755,8.57043767153842,5.11763668235212,3.87541549516443,32.8369666596055,10.3055104426077,3.18518253038899,7.8874297364322,6.23838597211826,28.9850392555047,12.4264786690818,16.1122139914183,5.11430232774949,8.26990781684432,1.56302802246618,18.8572820026624,11.1364903906866,6.35781170733295,5.94330744641873,2.34323429584154,3.30698874401895,5.51717548686989,9.29857175330973,2.19303106742873,6.94695649745012,2.98981115411355,3.57734797390867,0.535701835878287,0.672567444437648,0.606965604236632,1.59363533945908,15.6116171486244,1.15233987555779,8.05993644355867,10.0595204805711,6.77459567697346,2.12748913591143,5.89526430027966,7.2998576350978,2.67096502857203,7.84762057278609,16.4368569691709,2.15927591218621,1.9110067515482,6.2184593433691,0.316027223465453,1.97610423125813,6.08503953059028,8.01711364730253,13.4690506705974,20.8276542054619,19.3552705307946,2.58136415292167,6.03493203725883,6.73185897597346,5.08064460229115,1.3746412112643,8.37557241293664,12.4220062067066,10.4025551571947,7.16496705391274,5.12055284925532,1.94228651156368,1.12929087541872,9.27851545070559,13.1141968125968,2.57333409808316,3.18321240258189,2.73516208788408,2.93659813301296,1.97892930141772,4.22695961986686,2.00652811080656,9.39806110167016,0.940634592723046,12.5025644094492,3.53514820652439,14.9194435007358,2.97046400327086,19.019507741253,12.4046793722106,2.81951753939561,4.64096793409756,0.89947040332436,9.10625086888854,30.7018538392652,0.641930933513346,4.3820183294791,1.37618785021362,8.31369582278418,4.89091842798872,4.96337878393677,10.4724165681691,9.52248312927721,5.95192029066802,10.1678638298912,12.1135437394661,4.92049056856808,1.96678029534652,7.34851305866334,9.89291648497223,5.87878291584233,3.03253168464988,2.005660314339,4.69827928953084,2.41167717140561,2.48750831837634,6.72314473102319,1.70587185520785,4.99935306073855,3.22944549180031,1.92431614317159,4.82167009096638,2.73682780596109,5.45716410187192,4.78976845373315,4.44903291410865,2.62673006756891,3.44266585884847,3.32660356546013,23.3627380913497,12.8072815053259,7.7228912914776,2.24563005266467,21.1176848163109,13.2020759717496,10.5793006362092,3.32878387092756,3.62292828463847,1.60284246151616 | |||
|short_description=p2@MICALL1 | |||
}} |
Latest revision as of 06:45, 20 September 2015
Short description: | p2@MICALL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MICALL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_033386_5end |
EntrezGene: | MICALL1 |
HGNC: | 29804 |
UniProt: | Q8N3F8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.27e-25 | 250 |
mesodermal cell | 2.00e-14 | 121 |
epithelial cell | 3.68e-12 | 253 |
lining cell | 9.25e-12 | 58 |
barrier cell | 9.25e-12 | 58 |
squamous epithelial cell | 2.69e-11 | 63 |
meso-epithelial cell | 5.99e-09 | 45 |
ectodermal cell | 2.29e-08 | 72 |
endothelial cell | 6.36e-08 | 36 |
endothelial cell of vascular tree | 5.67e-07 | 24 |
fibroblast | 8.07e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
cell layer | 2.41e-10 | 309 |
vasculature | 6.38e-10 | 78 |
vascular system | 6.38e-10 | 78 |
epithelium | 1.22e-09 | 306 |
vessel | 7.46e-09 | 68 |
splanchnic layer of lateral plate mesoderm | 4.66e-08 | 83 |
epithelial tube open at both ends | 1.09e-07 | 59 |
blood vessel | 1.09e-07 | 59 |
blood vasculature | 1.09e-07 | 59 |
vascular cord | 1.09e-07 | 59 |
multilaminar epithelium | 3.18e-07 | 83 |