FFCP PHASE1:Hg19::chr2:217537428..217537445,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3488 | |EntrezGene=3488 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5474 | |HGNC=5474 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=109bp_to_BC032366_5end | |association_with_transcript=109bp_to_BC032366_5end | ||
|cluster_id=chr2:217537428..217537445,- | |||
|coexpression_cluster_id=C858 | |coexpression_cluster_id=C858 | ||
|description=CAGE_peak_20_at_IGFBP5_5end | |description=CAGE_peak_20_at_IGFBP5_5end | ||
|id=chr2:217537428..217537445,- | |id=chr2:217537428..217537445,- | ||
|ontology_enrichment_celltype=CL:0000499;1.25e-10;28!CL:0000327;6.78e-10;15!CL:0000153;7.46e-10;9!CL:0000447;7.46e-10;9!CL:0002615;5.77e-09;3!CL:0002580;9.35e-08;3!CL:0000197;2.55e-07;6!CL:0000098;2.55e-07;6!CL:0002167;2.55e-07;6!CL:0000136;4.05e-07;13!CL:0000138;6.96e-07;6 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000499;1.25e-10;28!CL:0000327;6.78e-10;15!CL:0000153;7.46e-10;9!CL:0000447;7.46e-10;9!CL:0002615;5.77e-09;3!CL:0002580;9.35e-08;3!CL:0000197;2.55e-07;6!CL:0000098;2.55e-07;6!CL:0002167;2.55e-07;6!CL:0000136;4.05e-07;13!CL:0000138;6.96e-07;6 | ||
|ontology_enrichment_disease=DOID:0060084;2.64e-09;3!DOID:127;2.64e-09;3!DOID:0060072;4.75e-07;4!DOID:3307;4.81e-07;2 | |ontology_enrichment_celltype_v019_2=CL:0000499,9.05e-11,28;CL:0000153,4.29e-10,9;CL:0000447,4.29e-10,9;CL:0000327,4.68e-10,15;CL:0002615,6.98e-09,3;CL:0000197,1.74e-07,6;CL:0000098,1.74e-07,6;CL:0002167,1.74e-07,6;CL:0002580,1.89e-07,3;CL:0000058,4.36e-07,6;CL:0000138,4.36e-07,6 | ||
|ontology_enrichment_uberon=UBERON:0004457;1.30e-10;9!UBERON:0000042;1.30e-10;9!UBERON:0000310;1.86e-08;10!UBERON:0003688;1.21e-07;6!UBERON:0002358;1.21e-07;6!UBERON:0003684;1.21e-07;6!UBERON:0001178;1.21e-07;6!UBERON:0001443;1.27e-07;11 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.64e-09;3!DOID:127;2.64e-09;3!DOID:0060072;4.75e-07;4!DOID:3307;4.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.73e-09,3;DOID:127,2.73e-09,3;DOID:0060072,4.87e-07,4;DOID:3307,4.90e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005156!1.54e-08!59;UBERON:0000990!1.54e-08!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.30e-10;9!UBERON:0000042;1.30e-10;9!UBERON:0000310;1.86e-08;10!UBERON:0003688;1.21e-07;6!UBERON:0002358;1.21e-07;6!UBERON:0003684;1.21e-07;6!UBERON:0001178;1.21e-07;6!UBERON:0001443;1.27e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,2.51e-08,10;UBERON:0004457,9.72e-08,12;UBERON:0000042,9.72e-08,12;UBERON:0003688,1.37e-07,6;UBERON:0002358,1.37e-07,6;UBERON:0003684,1.37e-07,6;UBERON:0001178,1.37e-07,6;UBERON:0001443,1.66e-07,11 | |||
|phase1_expression=4.1786027232228,2.78330681058278,3.38290569830331,2.00146596706261,6.25745532198203,11.3404008133048,0,0,0,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0,0,0.612002073732759,1.56727360739044,0.85870796139317,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0,2.60723734129483,2.3858578411533,1.94653948121054,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97577561356255,0.25326102332916,0.926864265692532,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0.989067717114227,0.910161361938026,0,0,0,0,0,0,1.65261864797256,0.113432183160021,0.358779271377724,0.640672166455702,4.23863802319124,0,0.103052529238439,0.257640540045629,0.930584281657949,0.506328996723799,0.0974370051611986,0,0.736399189138395,2.10139873864455,0.710019185033229,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.2347220339942,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,6.33431407213111,0,0,1.86156681609409,1.04007436911366,0,0,0,0.857867961948885,0.542621605391443,0,0,1.06617584622764,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,4.57535895367776,2.85486382075459,1.89242898040722,4.21709093973768,0,0,0,0,0.184369168541703,0.0868836144680828,0.783204629850962,0.686286847621712,0,0,0,0,0,0,1.24053903909388,1.07423381301644,1.12264037773229,0.640695746278505,0,5.14732547659544,0,0.154209693802656,0.177561725313127,0,0,0.348631135379878,0,0,0,3.3296189967736,2.36718518408732,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,9.64103579064957,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,2.83331112147576,0,0,0,0,0.37064843820784,0,0,0,0,0,0.42793898803392,0.636406495851874,0,0.179872457583315,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0,0.731140468893853,1.05650146756755,1.09199929126389,7.21167702963935,1.13008116620243,0,0,1.31535265576129,0,0,0.202910376962704,0.92947049429925,0,0,0,0,0.354761064070598,3.79993743535795,3.95153871551882,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0.146508179271894,0,0,0,0,1.18785872333055,0,0,0.281338832821026,0.111308705022906,0,1.26675244876796,0.597743964753209,0.276283915531148,0.251932747854276,4.09074730008619,0,3.11039587661807,0,0,0,0.197286811273867,0,0,0,0,0,0.520855522170466,1.39935999993913,0.724999575434793,0,0,0,0,0.583209226766509,0.520874984799877,0,0,0,0.110579259931225,0,0,0,0,1.30815439456455,0.683652335082007,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0.19566461893209,0,0.789168805698781,1.20990716048664,0,0.947798694427319,0,0,0,0,0,0,0,0.138674673013139,0,0,0.174118413160805,2.09672001890436,0,0,0,0,0.387956065953678,0,1.35588444468319,0,0,0,0.195551382734803,0,0.426905989478705,0,0,0,0.857974989309823,0,0,0,0,0.209205692624666,15.6057272983572,0,0,0.136905378891993,0,10.314370594079,0,0.558564802544508,0.229160424011684,0.717873024576814,0,0,0,0.201550417460179,25.5812917315107,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0,0,0.315222829196793,0.157363764404994,0,0,0,0,0,1.5256112259285,3.25799761052228,7.77799342081141,7.51150928251641,0,0.246277562248017,1.36310417428337,0.226624183040251,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0.936669811613763,2.02889440055155,0,0,0.554805861502613,0,0.251567901752575,0.889811221596536,0,0.302461847526478,0,0,0.477890301491107,0,0.310525913752519,0,0.265841714557995,3.65221543268214,0,1.52322084867518,0.406870733204662,0.181848659202559,0.214821114084977,0.928067519756987,11.9428766609585,0.400027764663154,0,0,1.26184898228651,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0.622077260032973,0.76736622782191,0.431299245586727,0.157265941855896,0,0.33946505990805,0,0.247871528518004,0.558644917973244,3.18004350653419,0,0,6.34816698643231,25.7246200976688,0,0,0,0,0.252071696221718,0,0,1.42769420259154,0,0,0,0,0,0,0.198916222116275,0.676892955143315,0,0,0,0.818859587550484,0,0,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0,0.266107110487916,0,0.857440047187092,0,0,0,0.333694205676207,0.156986185701028,0.157115589916002,0,0.913158720509496,2.37520350340484,0,1.00067161847319,0,0,2.95559062914385,23.2496295771773,0,0,0.691259661814092,0,0,0,0.846774100381858,0.4582137370881,0,0,0,0,0,1.29485767437579,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| ||
|short_description=p20@IGFBP5 | |short_description=p20@IGFBP5 | ||
}} | }} |
Latest revision as of 06:47, 20 September 2015
Short description: | p20@IGFBP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_IGFBP5_5end |
Coexpression cluster: | C858_tridermal_hepatic_sacrococcigeal_normal_Olfactory_glioblastoma_granulosa |
Association with transcript: | 109bp_to_BC032366_5end |
EntrezGene: | IGFBP5 |
HGNC: | 5474 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell | 9.05e-11 | 28 |
GAG secreting cell | 4.29e-10 | 9 |
carbohydrate secreting cell | 4.29e-10 | 9 |
extracellular matrix secreting cell | 4.68e-10 | 15 |
adipocyte of omentum tissue | 6.98e-09 | 3 |
receptor cell | 1.74e-07 | 6 |
sensory epithelial cell | 1.74e-07 | 6 |
olfactory epithelial cell | 1.74e-07 | 6 |
preadipocyte of the breast | 1.89e-07 | 3 |
chondroblast | 4.36e-07 | 6 |
chondrocyte | 4.36e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
breast | 2.51e-08 | 10 |
cavity lining | 9.72e-08 | 12 |
serous membrane | 9.72e-08 | 12 |
omentum | 1.37e-07 | 6 |
peritoneum | 1.37e-07 | 6 |
abdominal cavity | 1.37e-07 | 6 |
visceral peritoneum | 1.37e-07 | 6 |
chest | 1.66e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.73e-09 | 3 |
leiomyoma | 2.73e-09 | 3 |
benign neoplasm | 4.87e-07 | 4 |
teratoma | 4.90e-07 | 2 |