FFCP PHASE1:Hg19::chr2:217537428..217537445,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:217537428..217537445,- to FFCP PHASE1:Hg19::chr2:217537428..217537445,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3488 | |EntrezGene=3488 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5474 | |HGNC=5474 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=109bp_to_BC032366_5end | |||
|cluster_id=chr2:217537428..217537445,- | |||
|coexpression_cluster_id=C858 | |||
|description=CAGE_peak_20_at_IGFBP5_5end | |||
|id=chr2:217537428..217537445,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000499;1.25e-10;28!CL:0000327;6.78e-10;15!CL:0000153;7.46e-10;9!CL:0000447;7.46e-10;9!CL:0002615;5.77e-09;3!CL:0002580;9.35e-08;3!CL:0000197;2.55e-07;6!CL:0000098;2.55e-07;6!CL:0002167;2.55e-07;6!CL:0000136;4.05e-07;13!CL:0000138;6.96e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000499,9.05e-11,28;CL:0000153,4.29e-10,9;CL:0000447,4.29e-10,9;CL:0000327,4.68e-10,15;CL:0002615,6.98e-09,3;CL:0000197,1.74e-07,6;CL:0000098,1.74e-07,6;CL:0002167,1.74e-07,6;CL:0002580,1.89e-07,3;CL:0000058,4.36e-07,6;CL:0000138,4.36e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.64e-09;3!DOID:127;2.64e-09;3!DOID:0060072;4.75e-07;4!DOID:3307;4.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.73e-09,3;DOID:127,2.73e-09,3;DOID:0060072,4.87e-07,4;DOID:3307,4.90e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005156!1.54e-08!59;UBERON:0000990!1.54e-08!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.30e-10;9!UBERON:0000042;1.30e-10;9!UBERON:0000310;1.86e-08;10!UBERON:0003688;1.21e-07;6!UBERON:0002358;1.21e-07;6!UBERON:0003684;1.21e-07;6!UBERON:0001178;1.21e-07;6!UBERON:0001443;1.27e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,2.51e-08,10;UBERON:0004457,9.72e-08,12;UBERON:0000042,9.72e-08,12;UBERON:0003688,1.37e-07,6;UBERON:0002358,1.37e-07,6;UBERON:0003684,1.37e-07,6;UBERON:0001178,1.37e-07,6;UBERON:0001443,1.66e-07,11 | |||
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| ||
|short_description=p20@IGFBP5 | |||
}} | }} |
Latest revision as of 06:47, 20 September 2015
Short description: | p20@IGFBP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_IGFBP5_5end |
Coexpression cluster: | C858_tridermal_hepatic_sacrococcigeal_normal_Olfactory_glioblastoma_granulosa |
Association with transcript: | 109bp_to_BC032366_5end |
EntrezGene: | IGFBP5 |
HGNC: | 5474 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell | 9.05e-11 | 28 |
GAG secreting cell | 4.29e-10 | 9 |
carbohydrate secreting cell | 4.29e-10 | 9 |
extracellular matrix secreting cell | 4.68e-10 | 15 |
adipocyte of omentum tissue | 6.98e-09 | 3 |
receptor cell | 1.74e-07 | 6 |
sensory epithelial cell | 1.74e-07 | 6 |
olfactory epithelial cell | 1.74e-07 | 6 |
preadipocyte of the breast | 1.89e-07 | 3 |
chondroblast | 4.36e-07 | 6 |
chondrocyte | 4.36e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
breast | 2.51e-08 | 10 |
cavity lining | 9.72e-08 | 12 |
serous membrane | 9.72e-08 | 12 |
omentum | 1.37e-07 | 6 |
peritoneum | 1.37e-07 | 6 |
abdominal cavity | 1.37e-07 | 6 |
visceral peritoneum | 1.37e-07 | 6 |
chest | 1.66e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.73e-09 | 3 |
leiomyoma | 2.73e-09 | 3 |
benign neoplasm | 4.87e-07 | 4 |
teratoma | 4.90e-07 | 2 |