FFCP PHASE1:Hg19::chr10:99446927..99446938,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:99446927..99446938,-
|short_description=p4@AVPI1
|description=CAGE_peak_4_at_AVPI1_5end
|association_with_transcript=76bp_to_NM_021732,uc001koi.2_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=60370 | |EntrezGene=60370 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30898 | |HGNC=30898 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T686 | |UniProt=Q5T686 | ||
|association_with_transcript=76bp_to_NM_021732,uc001koi.2_5end | |||
|cluster_id=chr10:99446927..99446938,- | |||
|description=CAGE_peak_4_at_AVPI1_5end | |||
|id=chr10:99446927..99446938,- | |||
|ontology_enrichment_celltype=CL:0000066!5.36e-15!254;CL:0000223!9.53e-09!59;CL:0002076!6.27e-07!43 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.92e-15,253;CL:0000223,3.22e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.33e-12!106;DOID:0050687!3.14e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.39e-10,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.12e-15!169;UBERON:0000925!5.12e-15!169;UBERON:0006595!5.12e-15!169;UBERON:0001007!2.70e-12!155;UBERON:0001555!2.70e-12!155;UBERON:0007026!2.70e-12!155;UBERON:0000077!1.81e-11!130;UBERON:0004921!1.99e-10!129;UBERON:0004185!1.99e-10!129;UBERON:0000062!2.74e-09!511;UBERON:0001041!1.46e-08!98;UBERON:0001048!9.61e-08!168;UBERON:0001737!1.23e-07!9;UBERON:0008947!2.16e-07!38;UBERON:0003258!2.16e-07!38;UBERON:0003104!5.76e-07!238;UBERON:0009142!5.76e-07!238;UBERON:0001004!5.95e-07!72;UBERON:0000481!6.36e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.75e-11;9!UBERON:0001557;2.75e-11;9!UBERON:0000072;1.75e-08;37!UBERON:0000065;1.01e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.49e-12,160;UBERON:0000925,1.49e-12,160;UBERON:0006595,1.49e-12,160;UBERON:0001737,3.26e-11,9;UBERON:0001007,7.31e-10,145;UBERON:0001555,7.31e-10,145;UBERON:0007026,7.31e-10,145;UBERON:0004921,5.27e-09,118;UBERON:0001004,1.67e-08,74;UBERON:0001041,2.70e-08,87;UBERON:0008947,7.90e-08,38;UBERON:0003258,7.90e-08,38 | |||
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| ||
|short_description=p4@AVPI1 | |||
}} | }} |
Latest revision as of 06:56, 20 September 2015
Short description: | p4@AVPI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AVPI1_5end |
Coexpression cluster: | NA |
Association with transcript: | 76bp_to_NM_021732, uc001koi.2_5end |
EntrezGene: | AVPI1 |
HGNC: | 30898 |
UniProt: | Q5T686 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.92e-15 | 253 |
endodermal cell | 3.22e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.49e-12 | 160 |
endoderm | 1.49e-12 | 160 |
presumptive endoderm | 1.49e-12 | 160 |
larynx | 3.26e-11 | 9 |
digestive system | 7.31e-10 | 145 |
digestive tract | 7.31e-10 | 145 |
primitive gut | 7.31e-10 | 145 |
subdivision of digestive tract | 5.27e-09 | 118 |
respiratory system | 1.67e-08 | 74 |
foregut | 2.70e-08 | 87 |
respiratory primordium | 7.90e-08 | 38 |
endoderm of foregut | 7.90e-08 | 38 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.39e-10 | 106 |