FFCP PHASE1:Hg19::chr7:100034048..100034057,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221908 | |EntrezGene=221908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28320 | |HGNC=28320 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000487452,uc003uux.1_5end | |association_with_transcript=-2bp_to_ENST00000487452,uc003uux.1_5end | ||
|cluster_id=chr7:100034048..100034057,- | |||
|description=CAGE_peak_3_at_PPP1R35_5end | |description=CAGE_peak_3_at_PPP1R35_5end | ||
|id=chr7:100034048..100034057,- | |id=chr7:100034048..100034057,- | ||
|ontology_enrichment_celltype=CL:0002139!4.86e-10!24;CL:0000003!4.17e-09!722;CL:0000012!7.86e-08!682;CL:0000071!8.13e-08!18;CL:0002546!8.13e-08!18;CL:0000115!1.11e-07!35;CL:0000548!6.19e-07!679;CL:0000004!6.19e-07!679;CL:0000255!6.19e-07!679 | |ontology_enrichment_celltype=CL:0002139!4.86e-10!24;CL:0000003!4.17e-09!722;CL:0000012!7.86e-08!682;CL:0000071!8.13e-08!18;CL:0002546!8.13e-08!18;CL:0000115!1.11e-07!35;CL:0000548!6.19e-07!679;CL:0000004!6.19e-07!679;CL:0000255!6.19e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.51e-13;24!CL:0000115;2.44e-12;36!CL:0000071;1.60e-09;18!CL:0002078;2.20e-08;45!CL:1000746;3.35e-07;7!CL:1000612;3.35e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.05e-15,36;CL:0002139,3.07e-13,24;CL:0002078,1.73e-11,45;CL:0000071,1.50e-09,18;CL:0002546,1.50e-09,18;CL:0000213,8.62e-08,58;CL:0000215,8.62e-08,58;CL:1000746,8.20e-07,7;CL:1000612,8.20e-07,7 | |||
|ontology_enrichment_development_v019=CL:0002546;1.60e-09;18 | |||
|ontology_enrichment_disease=DOID:2531!1.12e-07!51;DOID:0060083!1.12e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!8.13e-08!18;UBERON:0004638!8.13e-08!18;UBERON:0004852!8.13e-08!18;UBERON:0000487!1.61e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.60e-09;18!UBERON:0001986;1.60e-09;18!UBERON:0004852;1.60e-09;18!UBERON:0000487;6.30e-09;22!UBERON:0006914;1.51e-07;25!UBERON:0000074;3.35e-07;7!UBERON:0001229;3.35e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.50e-09,18;UBERON:0001986,1.50e-09,18;UBERON:0004852,1.50e-09,18;UBERON:0000487,4.59e-09,22;UBERON:0006914,1.15e-07,25;UBERON:0010532,8.20e-07,7;UBERON:0000074,8.20e-07,7;UBERON:0001229,8.20e-07,7;UBERON:0001230,8.20e-07,7;UBERON:0003220,8.20e-07,7;UBERON:0005749,8.20e-07,7;UBERON:0004199,8.20e-07,7;UBERON:0004209,8.20e-07,7;UBERON:0004198,8.20e-07,7 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0.261185628199839,0.737201809504527,0,0.218441372130172,0,0.618831764800233,0.331397375727916,0,2.41077811209591,0,0.487932798790507,0.246242116153576,0.816002764977012,0.626909442956176,0.572471974262113,0.684372125364421,0.627713197974014,0.0764134057479513,0.0821005894499457,0,0.786728553697808,1.53531759238885,0.464448369948228,1.83884244895785,0.6024118375565,0.369754010166788,1.39440961044543,0.568676929949686,3.22960483268332,1.10799081706375,0.401088894940283,0.434021741431704,0,0,0,0.872389432677388,0,0,0.232429036905685,0.411167888021826,0.929119112685311,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,0.329851300186716,0,0,0.290209238628584,0,0.622822248995575,0.502497330513487,0,0,0.605399502633369,0,0.316462387440884,0.211255286311942,0.850417199860174,0.628975936525128,0.22465726229299,1.05123824989054,0.803627933485401,0.570025487482497,0.59675003159727,1.46131323011707,1.75996244461323,1.09227722252426,1.77901850772711,0.426730222566507,0,0.574752439954483,0,0,0.569212969109448,0.587237189370939,0.764546456250458,3.96513985737078,1.12101712596307,1.31692042387539,0.393419540227666,0.393010762749165,0.822405995998037,1.67186495390678,0.651844533267181,1.89379122293893,1.94826728407911,0.891283655081389,0.589211814949674,1.99380505125259,3.24964636518019,1.79327847615945,1.43065282315866,0.822189523018381,0,0.289803085735052,1.77943875794473,0.802622484269139,0,0.566546713487831,1.91610246800961,2.06176467289578,1.26509846009751,1.59282707162048,0.651083453856419,0,0.602300476311091,0.511946444617674,1.24930726552346,0.473554504088034,0,0.604820229674197,0.534880391567015,0.724122019413995,0,0.670700859703636,0,0.361439152384566,0,0,0,0.486634870302636,0.189069634328136,0.443458794925128,0.263504357079378,0.327447688744282,0.728590576585084,0,0,0,0,0.715471872916026,0.571994910780128,0,0.39752481473341,0.860234595106124,2.08284300964557,1.69592382577203,2.93649605346934,0.825354125820202,1.04497483268405,1.55050055501597,0.71153252537342,0.33472061276467,0.402829317109147,2.28081631715554,2.19655851793353,0.735326160691737,0,0.714397826272638,2.02076435363553,1.12611480483322,1.53316637465883,1.89853131913626,0.916008719652036,5.27121669744253,0,0,0,0.12663051166458,0.926864265692532,0,0,0,1.06748995729705,0,0,0.808264032418128,0.653847612453835,0,0,0.234321431833797,0.624320153660641,0.570471821544449,0.448346041655403,0.352303495931295,0.161872944368132,0.280901613404497,0,0.491337269247072,0.206651562351531,0,0.247266929278557,0.910161361938026,1.43723628363248,0.336672227908132,0.500474079487857,0.554128230968366,0.438977620880838,0,0.150238058906597,0.340296549480063,1.07633781413317,0,0.635795703478686,0.600182192168805,0.103052529238439,0.257640540045629,0,0.337552664482532,0.389748020644795,0.757301322732344,0.184099797284599,0.161646056818812,0.710019185033229,0.302256294682921,0.339121184620975,0.386521706326594,0,0.286804595389004,0.731842236777572,1.19276791489337,0.580969714347592,1.24393266018445,0.756962552626885,1.09493207722749,0,0,0,0.464367928031979,0,0.236613600079688,0.505754070234305,0.482022059766964,0.661763836394364,0.871517776369625,0,0.269662616320329,0,0,2.21446636387394,0,1.2347220339942,1.47008711385542,0,0,0,0.441463099414651,0.368965315629341,0.686271241194102,0.109750285408626,0,0,0.185176890317059,0,0,0,0.34779121492523,0.117408694235822,1.15493158208859,2.77791307545966,1.14152491340759,0,0.858486162094873,0.246217006087397,0.234004265139238,0,0.93733833986777,0,0,0.179117045405697,0,0,0.985326475791887,0,0,0.144119953416961,0.6312121671319,0.126995788584338,0,0,0,0.514137463516618,0,0,0.448524337381443,0,0.51336800074665,0.258543431515556,0,0,0.26593811658487,0,0.771622122786426,0,0.532844358032199,0,0,0.823240336780769,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0,0.205476322550383,0.179060963239896,4.59549090373462,1.57624608161542,0.862510299438069,0.641715181398742,0.76228387266739,0,0,0.167516265334349,0.637938751653163,0,0,0.414415513436035,0.36807447515742,1.50051156317903,0.271265023699736,0.207970861530807,0,0.157702415033935,0.35142424497814,0.300946099727719,2.27407504055985,1.03473071292505,0,0,0.0868836144680828,0.783204629850962,0,0.620304078368662,0.647142602455851,0.960548020230999,0.606255142892519,0,0,0,0.306923946576125,0,0,0,0.160853921143607,1.48418066444991,0,0,0.328508624055237,0.519254429183621,0.464841513839837,0.241718899183244,0.200506470303285,0.0920809889358963,0,0.546273504020151,0,0.902399225814824,0.385076685522074,3.13739907670742,1.46139224653261,0.527758144464379,2.27466768141793,1.53084334748864,0,6.16909010761157,1.08378575017541,1.00337954770971,0.509752546090077,0.831076008928724,0.223874754722178,0,0,0.256450125116389,1.31205858279882,0.650756789328606,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,0,0.290012154876366,0.308097234229289,0,0.275673144969061,0.10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| ||
|short_description=p3@PPP1R35 | |short_description=p3@PPP1R35 | ||
}} | }} |
Latest revision as of 07:04, 20 September 2015
Short description: | p3@PPP1R35 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PPP1R35_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000487452, uc003uux.1_5end |
EntrezGene: | PPP1R35 |
HGNC: | 28320 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.05e-15 | 36 |
endothelial cell of vascular tree | 3.07e-13 | 24 |
meso-epithelial cell | 1.73e-11 | 45 |
blood vessel endothelial cell | 1.50e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.50e-09 | 18 |
lining cell | 8.62e-08 | 58 |
barrier cell | 8.62e-08 | 58 |
glomerular cell | 8.20e-07 | 7 |
kidney corpuscule cell | 8.20e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.50e-09 | 18 |
endothelium | 1.50e-09 | 18 |
cardiovascular system endothelium | 1.50e-09 | 18 |
simple squamous epithelium | 4.59e-09 | 22 |
squamous epithelium | 1.15e-07 | 25 |
primitive nephron | 8.20e-07 | 7 |
renal glomerulus | 8.20e-07 | 7 |
renal corpuscle | 8.20e-07 | 7 |
glomerular capsule | 8.20e-07 | 7 |
metanephric mesenchyme | 8.20e-07 | 7 |
glomerular tuft | 8.20e-07 | 7 |
S-shaped body | 8.20e-07 | 7 |
renal vesicle | 8.20e-07 | 7 |
comma-shaped body | 8.20e-07 | 7 |