FFCP PHASE1:Hg19::chr9:116327872..116327883,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:116327872..116327883,+
|short_description=p25@RGS3
|description=CAGE_peak_25_at_RGS3_5end
|association_with_transcript=-91bp_to_uc011lxh.1_5end
|EntrezGen...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5998 | |EntrezGene=5998 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9999 | |HGNC=9999 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-91bp_to_uc011lxh.1_5end | |||
|cluster_id=chr9:116327872..116327883,+ | |||
|description=CAGE_peak_25_at_RGS3_5end | |||
|id=chr9:116327872..116327883,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;5.18e-13;3!CL:0002178;1.78e-12;3!CL:0000094;1.40e-10;8!CL:0000081;7.94e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,4.89e-13,3;CL:0002178,1.41e-12,3;CL:0000094,1.33e-10,8;CL:0000081,7.68e-08,11 | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.64e-10;1!UBERON:0006222;5.53e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.04e-18;2!DOID:4960;5.53e-10;1!DOID:178;5.53e-10;1!DOID:326;5.53e-10;1!DOID:3978;5.53e-10;1!DOID:3111;5.53e-10;1!DOID:3394;5.53e-10;1!DOID:0070004;5.53e-10;1!DOID:5844;5.53e-10;1!DOID:3603;5.53e-10;1!DOID:1287;8.07e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.20e-18,2;DOID:4960,4.06e-10,1;DOID:0070004,4.06e-10,1;DOID:178,6.33e-10,1;DOID:326,6.33e-10,1;DOID:3978,6.33e-10,1;DOID:3394,6.33e-10,1;DOID:5844,6.33e-10,1;DOID:1287,8.63e-10,4;DOID:3111,1.07e-09,1;DOID:3603,1.07e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.43e-08!115;UBERON:0000153!1.57e-07!129;UBERON:0007811!1.57e-07!129;UBERON:0000033!2.27e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.65e-12;25!UBERON:0001894;1.11e-11;7!UBERON:0002146;5.53e-10;1!UBERON:0005623;5.53e-10;1!UBERON:0002784;1.39e-09;4!UBERON:0000945;7.76e-08;5!UBERON:0010039;7.76e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001894,7.02e-12,7;UBERON:0006222,7.02e-12,7;UBERON:0007100,3.02e-11,27;UBERON:0002146,8.24e-10,1;UBERON:0005623,8.24e-10,1;UBERON:0002784,9.85e-10,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.152826811495903,0,0.0787107813136792,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.263504357079378,0.0654895377488563,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,1.06748995729705,0,0.311211035399766,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0.773043412653187,0,0.286804595389004,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,1.20725313949488,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,0.503946384596579,0.425325291727159,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,1.04007436911366,0,1.41849132023278,0,0,0,0,0,0,0,0.602878754119172,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,2.48649308061621,0.12269149171914,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.276242966807689,0.114814448164607,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0.812839312631559,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0.650756789328606,0.206082023295445,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0.096670718292122,0,0,0.137836572484531,0,0,0.170453254832202,0.178064071293475,0.826424576804891,0.768760269460425,0.510450849978337,0.30347334256665,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0,0.211107635297664,0,0,0,0.48111056362756,0,0,0,0.86101074534246,0,0,0.459446800413919,0,0,0.569647187174163,0.714695326373367,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0.20453736500431,0.861593638227486,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0.349839999984783,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0.83654246567162,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,0,1.40558667435203,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.391969589657511,0,0,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0.0633107959558787,0,0,0,0.39961921916426,1.15272333723285,0,0,0,0,0,0,0.313808538937,0,0,0.600420288709789,0.136905378891993,0,0,0,0,1.14580212005842,0,1.19807400299395,3.86303443322914,2.4548860318606,5.71059516137173,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0.566560457600628,0,0,0.387848869084652,0,0,0,0,0,0.414239055347196,0,0.395223263795889,0,1.91502377331055,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0.110929051536852,0.434674820589684,0,0.249960815924213,0.454947352624943,0,0.470531639396343,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0.336749488765919,0,0,0.428883182749851,0.782982875895635,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,1.05656061679314,0,0,1.37771983728653,0,0,0.139879507719444,0,0,1.1860729253635,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0.138314504928436,0,0,0.196295437002051,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0.147856086217045,0.135075169236789,0,0,0.126831620387814,0,0,0.992422356778588,0,0.255524855279191,0,1.3451348888753,0,0,0,0,0,0.543757863814654,0.0657727735628491,0,0,0.235479278551542,0,0.280272163313789,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.223710863595585,1.66855397145913,0,0,0.307988420568741,0,0,0,0,0,0,0,1.35866559210006,0.0771741581079447,0,0.470317296361523,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0.178553938605658,0.352894871715692,0.561689566824178,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0,0,0.0918948995348449,0,0.227336094654718,0,1.65833887891756,0.310298987585686,0.426467963801962,0.23806443146374,0,0,0.112131862580613,0.318235791390825,0.202117188958219,1.08858373948481,0.342233301085281,0.0673520530145875,0.143444410785353,0,0.569822880276821,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.152826811495903,0,0.0787107813136792,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.263504357079378,0.0654895377488563,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,1.06748995729705,0,0.311211035399766,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0.773043412653187,0,0.286804595389004,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,1.20725313949488,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,0.503946384596579,0.425325291727159,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,1.04007436911366,0,1.41849132023278,0,0,0,0,0,0,0,0.602878754119172,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,2.48649308061621,0.12269149171914,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.276242966807689,0.114814448164607,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0.812839312631559,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0.650756789328606,0.206082023295445,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0.096670718292122,0,0,0.137836572484531,0,0,0.170453254832202,0.178064071293475,0.826424576804891,0.768760269460425,0.510450849978337,0.30347334256665,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0,0.211107635297664,0,0,0,0.48111056362756,0,0,0,0.86101074534246,0,0,0.459446800413919,0,0,0.569647187174163,0.714695326373367,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0.20453736500431,0.861593638227486,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0.349839999984783,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0.83654246567162,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,0,1.40558667435203,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.391969589657511,0,0,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0.0633107959558787,0,0,0,0.39961921916426,1.15272333723285,0,0,0,0,0,0,0.313808538937,0,0,0.600420288709789,0.136905378891993,0,0,0,0,1.14580212005842,0,1.19807400299395,3.86303443322914,2.4548860318606,5.71059516137173,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0.566560457600628,0,0,0.387848869084652,0,0,0,0,0,0.414239055347196,0,0.395223263795889,0,1.91502377331055,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0.110929051536852,0.434674820589684,0,0.249960815924213,0.454947352624943,0,0.470531639396343,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0.336749488765919,0,0,0.428883182749851,0.782982875895635,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,1.05656061679314,0,0,1.37771983728653,0,0,0.139879507719444,0,0,1.1860729253635,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0.138314504928436,0,0,0.196295437002051,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0.147856086217045,0.135075169236789,0,0,0.126831620387814,0,0,0.992422356778588,0,0.255524855279191,0,1.3451348888753,0,0,0,0,0,0.543757863814654,0.0657727735628491,0,0,0.235479278551542,0,0.280272163313789,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.223710863595585,1.66855397145913,0,0,0.307988420568741,0,0,0,0,0,0,0,1.35866559210006,0.0771741581079447,0,0.470317296361523,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0.178553938605658,0.352894871715692,0.561689566824178,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0,0,0.0918948995348449,0,0.227336094654718,0,1.65833887891756,0.310298987585686,0.426467963801962,0.23806443146374,0,0,0.112131862580613,0.318235791390825,0.202117188958219,1.08858373948481,0.342233301085281,0.0673520530145875,0.143444410785353,0,0.569822880276821,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p25@RGS3 | |||
}} | }} |
Latest revision as of 07:24, 20 September 2015
Short description: | p25@RGS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_RGS3_5end |
Coexpression cluster: | NA |
Association with transcript: | -91bp_to_uc011lxh.1_5end |
EntrezGene: | RGS3 |
HGNC: | 9999 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 4.89e-13 | 3 |
epithelial cell of stomach | 1.41e-12 | 3 |
granulocyte | 1.33e-10 | 8 |
blood cell | 7.68e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
diencephalon | 7.02e-12 | 7 |
future diencephalon | 7.02e-12 | 7 |
primary circulatory organ | 3.02e-11 | 27 |
pulmonary valve | 8.24e-10 | 1 |
semi-lunar valve | 8.24e-10 | 1 |
regional part of diencephalon | 9.85e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.20e-18 | 2 |
bone marrow cancer | 4.06e-10 | 1 |
myeloma | 4.06e-10 | 1 |
vascular disease | 6.33e-10 | 1 |
ischemia | 6.33e-10 | 1 |
extrinsic cardiomyopathy | 6.33e-10 | 1 |
myocardial ischemia | 6.33e-10 | 1 |
myocardial infarction | 6.33e-10 | 1 |
cardiovascular system disease | 8.63e-10 | 4 |
cystadenocarcinoma | 1.07e-09 | 1 |
mucinous cystadenocarcinoma | 1.07e-09 | 1 |