FFCP PHASE1:Hg19::chr6:125541245..125541259,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7164 | |EntrezGene=7164 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12006 | |HGNC=12006 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=254bp_to_ENST00000524679_5end | |association_with_transcript=254bp_to_ENST00000524679_5end | ||
|cluster_id=chr6:125541245..125541259,+ | |||
|coexpression_cluster_id=C1649 | |||
|description=CAGE_peak_16_at_TPD52L1_5end | |description=CAGE_peak_16_at_TPD52L1_5end | ||
|id=chr6:125541245..125541259,+ | |id=chr6:125541245..125541259,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000511;2.37e-29;1!CL:0002625;2.37e-29;1!CL:0000216;2.37e-29;1!CL:0000077;6.57e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,2.37e-29,1;CL:0002625,2.37e-29,1;CL:0000216,2.37e-29,1;CL:0000077,6.19e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0008801;2.37e-29;1 | |||
|ontology_enrichment_disease=DOID:1749!1.05e-08!14;DOID:305!4.30e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:5409;1.82e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.82e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0005904!3.91e-10!4;UBERON:0007023!8.52e-10!115;UBERON:0006947!8.07e-08!3;UBERON:0004054!8.07e-08!3;UBERON:0003135!2.08e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;2.37e-29;1!UBERON:0001136;2.37e-29;1!UBERON:0001343;2.37e-29;1!UBERON:0004910;2.37e-29;1!UBERON:0004813;2.37e-29;1!UBERON:0001567;2.37e-29;1!UBERON:0001829;2.05e-15;2!UBERON:0004909;2.05e-15;2!UBERON:0004089;2.05e-15;2!UBERON:0001041;4.04e-09;14!UBERON:0005904;2.26e-08;4!UBERON:0000945;4.79e-07;5!UBERON:0010039;4.79e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,1.78e-29,1;UBERON:0001567,1.78e-29,1;UBERON:0008801,1.78e-29,1;UBERON:0001136,2.37e-29,1;UBERON:0001343,2.37e-29,1;UBERON:0004910,2.37e-29,1;UBERON:0005154,2.37e-29,1;UBERON:0005295,2.37e-29,1;UBERON:0004813,2.37e-29,1;UBERON:0005297,2.37e-29,1;UBERON:0005294,2.37e-29,1;UBERON:0010141,2.37e-29,1;UBERON:0005891,2.37e-29,1;UBERON:0001829,1.78e-15,2;UBERON:0004089,1.78e-15,2;UBERON:0004909,2.05e-15,2;UBERON:0005904,2.26e-08,4 | |||
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|phase1_expression=0,0,0.422863212287913,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.220587945464788,0,0.474541238222193,0,0.196221465125346,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49553699578462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0.520855522170466,0,0,0.227586896570999,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0.0801588202515337,0,0,0,8.36117152011184,0,0.14405479798815,0,0,0,0,0,0,0.600420288709789,0,0,0.429765441419957,0,0.279282401272254,0,0,0.399358000997982,0.429226048136571,0.446342914883745,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85280868296583,0.219284049578707,0,0,0.168942440653073,0.512483037175893,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0.11796972334774,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,1.64477330057155,0.496211178389294,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,6.7767649223376,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0.462175628631418,0,0.126166424835079,0,0,0,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p16@TPD52L1 | |short_description=p16@TPD52L1 | ||
}} | }} |
Latest revision as of 07:28, 20 September 2015
Short description: | p16@TPD52L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TPD52L1_5end |
Coexpression cluster: | C1649_gastric_small_Wilms_adrenal_rhabdomyosarcoma_cerebellum_mesothelioma |
Association with transcript: | 254bp_to_ENST00000524679_5end |
EntrezGene: | TPD52L1 |
HGNC: | 12006 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 2.37e-29 | 1 |
seminiferous tubule epithelial cell | 2.37e-29 | 1 |
Sertoli cell | 2.37e-29 | 1 |
mesothelial cell | 6.19e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 1.78e-29 | 1 |
cheek | 1.78e-29 | 1 |
parotid gland primordium | 1.78e-29 | 1 |
mesothelium | 2.37e-29 | 1 |
seminiferous tubule of testis | 2.37e-29 | 1 |
epithelium of male gonad | 2.37e-29 | 1 |
epithelial cord | 2.37e-29 | 1 |
sex cord | 2.37e-29 | 1 |
seminiferous tubule epithelium | 2.37e-29 | 1 |
testis sex cord | 2.37e-29 | 1 |
genital ridge | 2.37e-29 | 1 |
primitive sex cord of indifferent gonad | 2.37e-29 | 1 |
coelomic epithelium | 2.37e-29 | 1 |
major salivary gland | 1.78e-15 | 2 |
midface | 1.78e-15 | 2 |
epithelium of gonad | 2.05e-15 | 2 |
duct of male reproductive system | 2.26e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.82e-08 | 4 |